RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
CTNND1-229ENST00000531014 FRYLO94915 3013 aa3.82□□□□□ -1.8
CTNND1-229ENST00000531014 PDZD2O15018 2839 aa3.81□□□□□ -1.8
CTNND1-229ENST00000531014 SZT2Q5T011 3432 aa3.8□□□□□ -1.8
CTNND1-229ENST00000531014 NBEAQ8NFP9 2946 aa3.8□□□□□ -1.8
CTNND1-229ENST00000531014 REV3LO60673 3130 aa3.8□□□□□ -1.8
CTNND1-229ENST00000531014 LAMA2P24043 3122 aaKnown RBP3.79□□□□□ -1.8
CTNND1-229ENST00000531014 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
CTNND1-229ENST00000531014 DMXL2Q8TDJ6 3036 aa3.78□□□□□ -1.8
CTNND1-229ENST00000531014 KALRNO60229 2985 aa3.78□□□□□ -1.8
CTNND1-229ENST00000531014 MXRA5Q9NR99 2828 aa3.77□□□□□ -1.81
CTNND1-229ENST00000531014 XIRP2A4UGR9 3374 aa3.77□□□□□ -1.81
CTNND1-229ENST00000531014 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
CTNND1-229ENST00000531014 INE1O15225 51 aa3.76□□□□□ -1.81
CTNND1-229ENST00000531014 COL12A1Q99715 3063 aa3.76□□□□□ -1.81
CTNND1-229ENST00000531014 WDFY4Q6ZS81 3184 aa3.76□□□□□ -1.81
CTNND1-229ENST00000531014 VCANP13611 3396 aa3.75□□□□□ -1.81
CTNND1-229ENST00000531014 CRYBG3Q68DQ2 2970 aa3.75□□□□□ -1.81
CTNND1-229ENST00000531014 OTOGQ6ZRI0 2925 aa3.74□□□□□ -1.81
CTNND1-229ENST00000531014 NIPBLQ6KC79 2804 aaeCLIP3.74□□□□□ -1.811e-6■□□□□ 9
CTNND1-229ENST00000531014 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
CTNND1-229ENST00000531014 KRTAP7-1Q8IUC3 87 aa3.74□□□□□ -1.81
CTNND1-229ENST00000531014 UNC80Q8N2C7 3258 aa3.72□□□□□ -1.81
CTNND1-229ENST00000531014 CDH23Q9H251 3354 aa3.72□□□□□ -1.81
CTNND1-229ENST00000531014 DMXL1Q9Y485 3027 aa3.72□□□□□ -1.81
CTNND1-229ENST00000531014 TENM2Q9NT68 2774 aa3.72□□□□□ -1.81
CTNND1-229ENST00000531014 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
CTNND1-229ENST00000531014 TRIOO75962 3097 aa3.7□□□□□ -1.82
CTNND1-229ENST00000531014 ATMQ13315 3056 aa3.7□□□□□ -1.82
CTNND1-229ENST00000531014 BRCA2P51587 3418 aa3.68□□□□□ -1.82
CTNND1-229ENST00000531014 XP32Q5T750 250 aa3.68□□□□□ -1.82
CTNND1-229ENST00000531014 LRBAP50851 2863 aa3.68□□□□□ -1.82
CTNND1-229ENST00000531014 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
CTNND1-229ENST00000531014 TENM3Q9P273 2699 aa3.63□□□□□ -1.83
CTNND1-229ENST00000531014 TACC2O95359 2948 aa3.63□□□□□ -1.83
CTNND1-229ENST00000531014 CELSR2Q9HCU4 2923 aa3.62□□□□□ -1.83
CTNND1-229ENST00000531014 NF1P21359 2839 aa3.62□□□□□ -1.83
CTNND1-229ENST00000531014 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
CTNND1-229ENST00000531014 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
CTNND1-229ENST00000531014 DNAH14Q0VDD8 3507 aa3.6□□□□□ -1.83
CTNND1-229ENST00000531014 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
CTNND1-229ENST00000531014 ZZEF1O43149 2961 aa3.58□□□□□ -1.84
CTNND1-229ENST00000531014 TENM1Q9UKZ4 2725 aa3.57□□□□□ -1.84
CTNND1-229ENST00000531014 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
CTNND1-229ENST00000531014 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
CTNND1-229ENST00000531014 LAMA1P25391 3075 aa3.55□□□□□ -1.84
CTNND1-229ENST00000531014 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
CTNND1-229ENST00000531014 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
CTNND1-229ENST00000531014 CFAP47Q6ZTR5 3102 aa3.54□□□□□ -1.84
CTNND1-229ENST00000531014 SPTBN5Q9NRC6 3674 aaKnown RBP3.53□□□□□ -1.84
CTNND1-229ENST00000531014 FBN1P35555 2871 aaKnown RBP3.5□□□□□ -1.85
CTNND1-229ENST00000531014 ADGRG4Q8IZF6 3080 aa3.49□□□□□ -1.85
CTNND1-229ENST00000531014 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
CTNND1-229ENST00000531014 SPEGQ15772 3267 aa3.49□□□□□ -1.85
CTNND1-229ENST00000531014 NBEAL2Q6ZNJ1 2754 aa3.48□□□□□ -1.85
CTNND1-229ENST00000531014 HRNRQ86YZ3 2850 aaPredicted RBP3.47□□□□□ -1.85
CTNND1-229ENST00000531014 MYO15AQ9UKN7 3530 aa3.47□□□□□ -1.85
CTNND1-229ENST00000531014 ZANQ9Y493 2812 aa3.47□□□□□ -1.85
CTNND1-229ENST00000531014 ANK3Q12955 4377 aaKnown RBP3.47□□□□□ -1.85
CTNND1-229ENST00000531014 DCHS2Q6V1P9 2916 aa3.46□□□□□ -1.86
CTNND1-229ENST00000531014 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
CTNND1-229ENST00000531014 TGP01266 2768 aa3.45□□□□□ -1.86
CTNND1-229ENST00000531014 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
CTNND1-229ENST00000531014 VPS13AQ96RL7 3174 aa3.43□□□□□ -1.86
CTNND1-229ENST00000531014 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
CTNND1-229ENST00000531014 VWFP04275 2813 aa3.41□□□□□ -1.86
CTNND1-229ENST00000531014 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
CTNND1-229ENST00000531014 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
CTNND1-229ENST00000531014 KRTAP3-2Q9BYR7 98 aa3.39□□□□□ -1.87
CTNND1-229ENST00000531014 FREM2Q5SZK8 3169 aa3.39□□□□□ -1.87
CTNND1-229ENST00000531014 BOD1L1Q8NFC6 3051 aa3.38□□□□□ -1.87
CTNND1-229ENST00000531014 ZFHX3Q15911 3703 aa3.36□□□□□ -1.87
CTNND1-229ENST00000531014 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CTNND1-229ENST00000531014 BIRC6Q9NR09 4857 aa3.35□□□□□ -1.87
CTNND1-229ENST00000531014 DCHS1Q96JQ0 3298 aa3.35□□□□□ -1.87
CTNND1-229ENST00000531014 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.87
CTNND1-229ENST00000531014 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
CTNND1-229ENST00000531014 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
CTNND1-229ENST00000531014 CELSR1Q9NYQ6 3014 aa3.3□□□□□ -1.88
CTNND1-229ENST00000531014 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
CTNND1-229ENST00000531014 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CTNND1-229ENST00000531014 MEGF8Q7Z7M0 2845 aa3.28□□□□□ -1.88
CTNND1-229ENST00000531014 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
CTNND1-229ENST00000531014 DNAH11Q96DT5 4516 aa3.27□□□□□ -1.89
CTNND1-229ENST00000531014 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
CTNND1-229ENST00000531014 ASPMQ8IZT6 3477 aa3.25□□□□□ -1.89
CTNND1-229ENST00000531014 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
CTNND1-229ENST00000531014 LOC400499M0QZD8 3231 aa3.23□□□□□ -1.89
CTNND1-229ENST00000531014 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
CTNND1-229ENST00000531014 CELSR3Q9NYQ7 3312 aa3.22□□□□□ -1.89
CTNND1-229ENST00000531014 DYNC2H1Q8NCM8 4307 aaKnown RBP3.19□□□□□ -1.9
CTNND1-229ENST00000531014 DMDP11532 3685 aa3.17□□□□□ -1.9
CTNND1-229ENST00000531014 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
CTNND1-229ENST00000531014 RELNP78509 3460 aa3.17□□□□□ -1.9
CTNND1-229ENST00000531014 DNAH9Q9NYC9 4486 aa3.17□□□□□ -1.9
CTNND1-229ENST00000531014 ZFHX4Q86UP3 3567 aa3.16□□□□□ -1.9
CTNND1-229ENST00000531014 DNAH10Q8IVF4 4471 aa3.16□□□□□ -1.9
CTNND1-229ENST00000531014 LRP1BQ9NZR2 4599 aa3.15□□□□□ -1.9
CTNND1-229ENST00000531014 AKAP9Q99996 3911 aa3.15□□□□□ -1.91
CTNND1-229ENST00000531014 ANK2Q01484 3957 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms