RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
CCDC90B-213ENST00000529611 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
CCDC90B-213ENST00000529611 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
CCDC90B-213ENST00000529611 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
CCDC90B-213ENST00000529611 SPINK1P00995 79 aa8.84□□□□□ -0.99
CCDC90B-213ENST00000529611 A0A0U1RQV1 116 aa8.83□□□□□ -1
CCDC90B-213ENST00000529611 FAM229AH3BQW9 127 aa8.83□□□□□ -1
CCDC90B-213ENST00000529611 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
CCDC90B-213ENST00000529611 RYR1P21817 5038 aa8.82□□□□□ -1
CCDC90B-213ENST00000529611 H7BZZ5 65 aa8.81□□□□□ -1
CCDC90B-213ENST00000529611 C5orf47Q569G3 176 aa8.81□□□□□ -1
CCDC90B-213ENST00000529611 TMEM258P61165 79 aa8.79□□□□□ -1
CCDC90B-213ENST00000529611 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
CCDC90B-213ENST00000529611 Q5VSD8 79 aa8.79□□□□□ -1
CCDC90B-213ENST00000529611 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
CCDC90B-213ENST00000529611 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
CCDC90B-213ENST00000529611 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
CCDC90B-213ENST00000529611 NDUFC1O43677 76 aa8.76□□□□□ -1.01
CCDC90B-213ENST00000529611 ZCCHC13Q8WW36 166 aaKnown RBP8.75□□□□□ -1.01
CCDC90B-213ENST00000529611 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
CCDC90B-213ENST00000529611 EPPK1P58107 5090 aaKnown RBP8.74□□□□□ -1.01
CCDC90B-213ENST00000529611 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
CCDC90B-213ENST00000529611 MP68P56378 58 aa8.73□□□□□ -1.01
CCDC90B-213ENST00000529611 TP53AIP1Q9HCN2 124 aa8.73□□□□□ -1.01
CCDC90B-213ENST00000529611 H0Y9P7 68 aa8.72□□□□□ -1.01
CCDC90B-213ENST00000529611 NDUFS5O43920 106 aa8.72□□□□□ -1.01
CCDC90B-213ENST00000529611 LINC00313P59037 77 aa8.72□□□□□ -1.01
CCDC90B-213ENST00000529611 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.01
CCDC90B-213ENST00000529611 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.02
CCDC90B-213ENST00000529611 TNXBP22105 4242 aa8.7□□□□□ -1.02
CCDC90B-213ENST00000529611 LINC00208Q96KT6 92 aa8.7□□□□□ -1.02
CCDC90B-213ENST00000529611 FAM236DA0A1B0GTK5 79 aa8.68□□□□□ -1.02
CCDC90B-213ENST00000529611 H3BPC8 53 aa8.68□□□□□ -1.02
CCDC90B-213ENST00000529611 FAM236CP0DP71 79 aa8.68□□□□□ -1.02
CCDC90B-213ENST00000529611 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
CCDC90B-213ENST00000529611 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-213ENST00000529611 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
CCDC90B-213ENST00000529611 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-213ENST00000529611 KRTAP10-8P60410 259 aa8.63□□□□□ -1.03
CCDC90B-213ENST00000529611 Q8N1X5 172 aa8.63□□□□□ -1.03
CCDC90B-213ENST00000529611 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
CCDC90B-213ENST00000529611 Q5W150 140 aa8.61□□□□□ -1.03
CCDC90B-213ENST00000529611 KRTAP13-3Q3SY46 172 aa8.6□□□□□ -1.03
CCDC90B-213ENST00000529611 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
CCDC90B-213ENST00000529611 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
CCDC90B-213ENST00000529611 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
CCDC90B-213ENST00000529611 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
CCDC90B-213ENST00000529611 OXTP01178 125 aa8.52□□□□□ -1.05
CCDC90B-213ENST00000529611 SERP1Q9Y6X1 66 aa8.52□□□□□ -1.05
CCDC90B-213ENST00000529611 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CCDC90B-213ENST00000529611 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
CCDC90B-213ENST00000529611 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
CCDC90B-213ENST00000529611 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
CCDC90B-213ENST00000529611 PCOTHQ58A44 107 aa8.5□□□□□ -1.05
CCDC90B-213ENST00000529611 PRR4Q16378 134 aa8.49□□□□□ -1.05
CCDC90B-213ENST00000529611 SPANXA2-OT1Q8N9U9 137 aa8.49□□□□□ -1.05
CCDC90B-213ENST00000529611 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
CCDC90B-213ENST00000529611 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
CCDC90B-213ENST00000529611 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
CCDC90B-213ENST00000529611 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
CCDC90B-213ENST00000529611 A8MUU9 505 aa8.42□□□□□ -1.06
CCDC90B-213ENST00000529611 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
CCDC90B-213ENST00000529611 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.06
CCDC90B-213ENST00000529611 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
CCDC90B-213ENST00000529611 HRES1P13985 223 aa8.33□□□□□ -1.08
CCDC90B-213ENST00000529611 Q75L30 129 aa8.32□□□□□ -1.08
CCDC90B-213ENST00000529611 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
CCDC90B-213ENST00000529611 SVIPQ8NHG7 77 aa8.31□□□□□ -1.08
CCDC90B-213ENST00000529611 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
CCDC90B-213ENST00000529611 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
CCDC90B-213ENST00000529611 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
CCDC90B-213ENST00000529611 HERC2O95714 4834 aa8.27□□□□□ -1.09
CCDC90B-213ENST00000529611 COA5Q86WW8 74 aa8.26□□□□□ -1.09
CCDC90B-213ENST00000529611 XP32Q5T750 250 aa8.24□□□□□ -1.09
CCDC90B-213ENST00000529611 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
CCDC90B-213ENST00000529611 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
CCDC90B-213ENST00000529611 ACYP2P14621 99 aa8.19□□□□□ -1.1
CCDC90B-213ENST00000529611 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
CCDC90B-213ENST00000529611 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
CCDC90B-213ENST00000529611 SPINK7P58062 85 aa8.17□□□□□ -1.1
CCDC90B-213ENST00000529611 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
CCDC90B-213ENST00000529611 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
CCDC90B-213ENST00000529611 J3QL48 77 aa8.12□□□□□ -1.11
CCDC90B-213ENST00000529611 Q1T7F1 81 aa8.12□□□□□ -1.11
CCDC90B-213ENST00000529611 LPAP08519 4548 aa8.09□□□□□ -1.11
CCDC90B-213ENST00000529611 LRP2P98164 4655 aa8.08□□□□□ -1.12
CCDC90B-213ENST00000529611 A8MUN3 132 aa8.06□□□□□ -1.12
CCDC90B-213ENST00000529611 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
CCDC90B-213ENST00000529611 KRTAP3-1Q9BYR8 98 aa8.04□□□□□ -1.12
CCDC90B-213ENST00000529611 V9GYY9 64 aa8.04□□□□□ -1.12
CCDC90B-213ENST00000529611 PSPHP1O15172 72 aa7.99□□□□□ -1.13
CCDC90B-213ENST00000529611 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
CCDC90B-213ENST00000529611 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
CCDC90B-213ENST00000529611 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CCDC90B-213ENST00000529611 PCLOQ9Y6V0 5065 aa7.93□□□□□ -1.14
CCDC90B-213ENST00000529611 Q5VV11 94 aa7.93□□□□□ -1.14
CCDC90B-213ENST00000529611 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-213ENST00000529611 HERC1Q15751 4861 aa7.84□□□□□ -1.15
CCDC90B-213ENST00000529611 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
CCDC90B-213ENST00000529611 A0A1B0GU69 56 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms