RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 SPTBN5Q9NRC6 3674 aaKnown RBP4.55□□□□□ -1.68
CTNND1-219ENST00000528621 XP32Q5T750 250 aa4.55□□□□□ -1.68
CTNND1-219ENST00000528621 ASH1LQ9NR48 2969 aaKnown RBP4.55□□□□□ -1.68
CTNND1-219ENST00000528621 DMXL2Q8TDJ6 3036 aa4.54□□□□□ -1.68
CTNND1-219ENST00000528621 REV3LO60673 3130 aa4.54□□□□□ -1.68
CTNND1-219ENST00000528621 UBR5O95071 2799 aaPredicted RBP4.53□□□□□ -1.69
CTNND1-219ENST00000528621 USP34Q70CQ2 3546 aa4.52□□□□□ -1.69
CTNND1-219ENST00000528621 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
CTNND1-219ENST00000528621 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
CTNND1-219ENST00000528621 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
CTNND1-219ENST00000528621 IGSF10Q6WRI0 2623 aa4.51□□□□□ -1.69
CTNND1-219ENST00000528621 CFAP47Q6ZTR5 3102 aa4.51□□□□□ -1.69
CTNND1-219ENST00000528621 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CTNND1-219ENST00000528621 KMT2BQ9UMN6 2715 aaPredicted RBP4.49□□□□□ -1.69
CTNND1-219ENST00000528621 TEP1Q99973 2627 aaKnown RBP4.49□□□□□ -1.69
CTNND1-219ENST00000528621 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
CTNND1-219ENST00000528621 MYO15AQ9UKN7 3530 aa4.49□□□□□ -1.69
CTNND1-219ENST00000528621 COL12A1Q99715 3063 aa4.49□□□□□ -1.69
CTNND1-219ENST00000528621 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
CTNND1-219ENST00000528621 A0A1B0GVY2 172 aa4.46□□□□□ -1.69
CTNND1-219ENST00000528621 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
CTNND1-219ENST00000528621 FLNCQ14315 2725 aa4.46□□□□□ -1.7
CTNND1-219ENST00000528621 APCP25054 2843 aa4.45□□□□□ -1.7
CTNND1-219ENST00000528621 P0C880 135 aa4.44□□□□□ -1.7
CTNND1-219ENST00000528621 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-219ENST00000528621 UTP20O75691 2785 aaKnown RBP4.43□□□□□ -1.7
CTNND1-219ENST00000528621 EYSQ5T1H1 3165 aa4.42□□□□□ -1.7
CTNND1-219ENST00000528621 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
CTNND1-219ENST00000528621 H0YAA0 97 aa4.42□□□□□ -1.7
CTNND1-219ENST00000528621 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CTNND1-219ENST00000528621 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.7
CTNND1-219ENST00000528621 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
CTNND1-219ENST00000528621 LOC400499M0QZD8 3231 aa4.4□□□□□ -1.7
CTNND1-219ENST00000528621 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
CTNND1-219ENST00000528621 TNRC18O15417 2968 aaPredicted RBP4.39□□□□□ -1.71
CTNND1-219ENST00000528621 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CTNND1-219ENST00000528621 ZANQ9Y493 2812 aa4.38□□□□□ -1.71
CTNND1-219ENST00000528621 CELSR2Q9HCU4 2923 aa4.36□□□□□ -1.71
CTNND1-219ENST00000528621 WDFY3Q8IZQ1 3526 aa4.35□□□□□ -1.71
CTNND1-219ENST00000528621 ITPR2Q14571 2701 aa4.35□□□□□ -1.71
CTNND1-219ENST00000528621 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
CTNND1-219ENST00000528621 FBN2P35556 2912 aa4.31□□□□□ -1.72
CTNND1-219ENST00000528621 NIPBLQ6KC79 2804 aaeCLIP4.31□□□□□ -1.721e-6■□□□□ 9
CTNND1-219ENST00000528621 DCHS1Q96JQ0 3298 aa4.3□□□□□ -1.72
CTNND1-219ENST00000528621 DCHS2Q6V1P9 2916 aa4.29□□□□□ -1.72
CTNND1-219ENST00000528621 ZFHX4Q86UP3 3567 aa4.29□□□□□ -1.72
CTNND1-219ENST00000528621 NF1P21359 2839 aa4.25□□□□□ -1.73
CTNND1-219ENST00000528621 CSMD1Q96PZ7 3565 aa4.24□□□□□ -1.73
CTNND1-219ENST00000528621 RELNP78509 3460 aa4.22□□□□□ -1.73
CTNND1-219ENST00000528621 ASPMQ8IZT6 3477 aa4.2□□□□□ -1.74
CTNND1-219ENST00000528621 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
CTNND1-219ENST00000528621 SMG1Q96Q15 3661 aaKnown RBP4.19□□□□□ -1.74
CTNND1-219ENST00000528621 MXRA5Q9NR99 2828 aa4.18□□□□□ -1.74
CTNND1-219ENST00000528621 CRYBG3Q68DQ2 2970 aa4.18□□□□□ -1.74
CTNND1-219ENST00000528621 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
CTNND1-219ENST00000528621 LAMA5O15230 3695 aa4.14□□□□□ -1.75
CTNND1-219ENST00000528621 TGP01266 2768 aa4.1□□□□□ -1.75
CTNND1-219ENST00000528621 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
CTNND1-219ENST00000528621 CELSR1Q9NYQ6 3014 aa4.1□□□□□ -1.75
CTNND1-219ENST00000528621 DMDP11532 3685 aa4.1□□□□□ -1.75
CTNND1-219ENST00000528621 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
CTNND1-219ENST00000528621 SVEP1Q4LDE5 3571 aa4.08□□□□□ -1.76
CTNND1-219ENST00000528621 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
CTNND1-219ENST00000528621 TENM4Q6N022 2769 aa4.06□□□□□ -1.76
CTNND1-219ENST00000528621 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
CTNND1-219ENST00000528621 PDZD2O15018 2839 aa4□□□□□ -1.77
CTNND1-219ENST00000528621 ALMS1Q8TCU4 4167 aa4□□□□□ -1.77
CTNND1-219ENST00000528621 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
CTNND1-219ENST00000528621 CUBNO60494 3623 aa3.97□□□□□ -1.77
CTNND1-219ENST00000528621 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.77
CTNND1-219ENST00000528621 SPENQ96T58 3664 aaKnown RBP3.95□□□□□ -1.78
CTNND1-219ENST00000528621 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
CTNND1-219ENST00000528621 VWFP04275 2813 aa3.94□□□□□ -1.78
CTNND1-219ENST00000528621 MUC3AQ02505 3323 aa3.91□□□□□ -1.78
CTNND1-219ENST00000528621 TENM2Q9NT68 2774 aa3.9□□□□□ -1.79
CTNND1-219ENST00000528621 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
CTNND1-219ENST00000528621 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
CTNND1-219ENST00000528621 FBN1P35555 2871 aaKnown RBP3.87□□□□□ -1.79
CTNND1-219ENST00000528621 NBPF19A0A087WUL8 3843 aa3.86□□□□□ -1.79
CTNND1-219ENST00000528621 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
CTNND1-219ENST00000528621 SRRM2Q9UQ35 2752 aaKnown RBP3.84□□□□□ -1.8
CTNND1-219ENST00000528621 INE1O15225 51 aa3.83□□□□□ -1.8
CTNND1-219ENST00000528621 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
CTNND1-219ENST00000528621 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
CTNND1-219ENST00000528621 KRTAP3-2Q9BYR7 98 aa3.82□□□□□ -1.8
CTNND1-219ENST00000528621 CSMD2Q7Z408 3487 aa3.81□□□□□ -1.8
CTNND1-219ENST00000528621 KRTAP10-4P60372 401 aaPredicted RBP3.8□□□□□ -1.8
CTNND1-219ENST00000528621 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
CTNND1-219ENST00000528621 BSNQ9UPA5 3926 aa3.8□□□□□ -1.8
CTNND1-219ENST00000528621 FBN3Q75N90 2809 aa3.78□□□□□ -1.8
CTNND1-219ENST00000528621 OTOGQ6ZRI0 2925 aa3.77□□□□□ -1.81
CTNND1-219ENST00000528621 ZFHX3Q15911 3703 aa3.77□□□□□ -1.81
CTNND1-219ENST00000528621 TRRAPQ9Y4A5 3859 aa3.76□□□□□ -1.81
CTNND1-219ENST00000528621 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
CTNND1-219ENST00000528621 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
CTNND1-219ENST00000528621 MEGF8Q7Z7M0 2845 aa3.73□□□□□ -1.81
CTNND1-219ENST00000528621 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
CTNND1-219ENST00000528621 AKAP9Q99996 3911 aa3.69□□□□□ -1.82
CTNND1-219ENST00000528621 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
CTNND1-219ENST00000528621 LCE3AQ5TA76 89 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms