RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PCOTH	Q58A44	107 aa		13.84	□□□□□ -0.19
GSDMD-208	ENST00000528475	DNAH8	Q96JB1	4490 aa		13.83	□□□□□ -0.2
GSDMD-208	ENST00000528475	C1orf134	Q5TEV5	83 aa		13.83	□□□□□ -0.2
GSDMD-208	ENST00000528475		Q5VV11	94 aa		13.82	□□□□□ -0.2
GSDMD-208	ENST00000528475		A0A087X002	238 aa		13.8	□□□□□ -0.2
GSDMD-208	ENST00000528475	NOTCH2NL	Q7Z3S9	236 aa		13.8	□□□□□ -0.2
GSDMD-208	ENST00000528475	DNAH2	Q9P225	4427 aa		13.75	□□□□□ -0.21
GSDMD-208	ENST00000528475	SSBP3-AS1	Q7Z2R9	100 aa		13.74	□□□□□ -0.21
GSDMD-208	ENST00000528475	LOC101927531	A0A1B0GV80	90 aa		13.71	□□□□□ -0.21
GSDMD-208	ENST00000528475	FBN3	Q75N90	2809 aa		13.71	□□□□□ -0.22
GSDMD-208	ENST00000528475	CIRBP-AS1	Q8TBR5	109 aa		13.7	□□□□□ -0.22
GSDMD-208	ENST00000528475	PRR15L	Q9BU68	103 aa		13.7	□□□□□ -0.22
GSDMD-208	ENST00000528475	KRTAP13-3	Q3SY46	172 aa		13.69	□□□□□ -0.22
GSDMD-208	ENST00000528475	SPINK6	Q6UWN8	80 aa		13.69	□□□□□ -0.22
GSDMD-208	ENST00000528475	KMT2A	Q03164	3969 aa		13.68	□□□□□ -0.22
GSDMD-208	ENST00000528475	FRAS1	Q86XX4	4008 aa		13.68	□□□□□ -0.22
GSDMD-208	ENST00000528475	C8orf87	E5RJ46	101 aa		13.68	□□□□□ -0.22
GSDMD-208	ENST00000528475		Q75L30	129 aa		13.65	□□□□□ -0.22
GSDMD-208	ENST00000528475	CHKB-CPT1B	H3BT56	60 aa		13.65	□□□□□ -0.22
GSDMD-208	ENST00000528475	LY6G6C	O95867	125 aa		13.65	□□□□□ -0.22
GSDMD-208	ENST00000528475	HRES1	P13985	223 aa		13.63	□□□□□ -0.23
GSDMD-208	ENST00000528475		Q5W150	140 aa		13.63	□□□□□ -0.23
GSDMD-208	ENST00000528475	LINC01558	Q9Y6Z2	57 aa		13.61	□□□□□ -0.23
GSDMD-208	ENST00000528475	KRTAP10-2	P60368	255 aa		13.55	□□□□□ -0.24
GSDMD-208	ENST00000528475	DNAH6	Q9C0G6	4158 aa		13.55	□□□□□ -0.24
GSDMD-208	ENST00000528475	ALMS1	Q8TCU4	4167 aa		13.53	□□□□□ -0.24
GSDMD-208	ENST00000528475	SPAG11A	Q6PDA7	123 aa		13.52	□□□□□ -0.25
GSDMD-208	ENST00000528475		A8MU10	97 aa		13.51	□□□□□ -0.25
GSDMD-208	ENST00000528475		Q6ZSA8	131 aa		13.51	□□□□□ -0.25
GSDMD-208	ENST00000528475	LINC00313	P59037	77 aa		13.51	□□□□□ -0.25
GSDMD-208	ENST00000528475	KRTAP13-2	Q52LG2	175 aa		13.5	□□□□□ -0.25
GSDMD-208	ENST00000528475	TG	P01266	2768 aa		13.48	□□□□□ -0.25
GSDMD-208	ENST00000528475		A6NED7	52 aa		13.46	□□□□□ -0.25
GSDMD-208	ENST00000528475	FAM229A	H3BQW9	127 aa		13.46	□□□□□ -0.25
GSDMD-208	ENST00000528475	DNAH11	Q96DT5	4516 aa		13.46	□□□□□ -0.26
GSDMD-208	ENST00000528475	LCA10	Q71F78	164 aa		13.45	□□□□□ -0.26
GSDMD-208	ENST00000528475	PMAIP1	Q13794	54 aa		13.44	□□□□□ -0.26
GSDMD-208	ENST00000528475	DNAH5	Q8TE73	4624 aa		13.44	□□□□□ -0.26
GSDMD-208	ENST00000528475	ACYP2	P14621	99 aa		13.43	□□□□□ -0.26
GSDMD-208	ENST00000528475	KRTAP10-1	P60331	282 aa		13.41	□□□□□ -0.26
GSDMD-208	ENST00000528475	CDC42SE1	Q9NRR8	79 aa		13.4	□□□□□ -0.26
GSDMD-208	ENST00000528475	ATP11AUN	Q6ZP68	121 aa		13.39	□□□□□ -0.27
GSDMD-208	ENST00000528475	DMAC1	Q96GE9	116 aa		13.39	□□□□□ -0.27
GSDMD-208	ENST00000528475	KRTAP16-1	A8MUX0	517 aa		13.37	□□□□□ -0.27
GSDMD-208	ENST00000528475	IGKV2-30	P06310	120 aa		13.36	□□□□□ -0.27
GSDMD-208	ENST00000528475	KRTAP1-4	P0C5Y4	121 aa		13.36	□□□□□ -0.27
GSDMD-208	ENST00000528475	PRR26	Q8N8Z3	221 aa		13.35	□□□□□ -0.27
GSDMD-208	ENST00000528475	SPTSSB	Q8NFR3	76 aa		13.27	□□□□□ -0.28
GSDMD-208	ENST00000528475	SPINK7	P58062	85 aa		13.26	□□□□□ -0.29
GSDMD-208	ENST00000528475	RETNLB	Q9BQ08	111 aa		13.25	□□□□□ -0.29
GSDMD-208	ENST00000528475	PKD1	P98161	4303 aa		13.25	□□□□□ -0.29
GSDMD-208	ENST00000528475	LRP1B	Q9NZR2	4599 aa		13.23	□□□□□ -0.29
GSDMD-208	ENST00000528475		A6NN06	94 aa		13.19	□□□□□ -0.3
GSDMD-208	ENST00000528475	C4orf48	Q5BLP8	95 aa		13.19	□□□□□ -0.3
GSDMD-208	ENST00000528475	SPINK1	P00995	79 aa		13.17	□□□□□ -0.3
GSDMD-208	ENST00000528475	PLA2G1B	P04054	148 aa	Known RBP	13.17	□□□□□ -0.3
GSDMD-208	ENST00000528475	FAT2	Q9NYQ8	4349 aa		13.17	□□□□□ -0.3
GSDMD-208	ENST00000528475	HYDIN	Q4G0P3	5121 aa		13.16	□□□□□ -0.3
GSDMD-208	ENST00000528475	TYMSOS	Q8TAI1	123 aa		13.16	□□□□□ -0.3
GSDMD-208	ENST00000528475	KTN1-AS1	Q86SY8	53 aa		13.14	□□□□□ -0.31
GSDMD-208	ENST00000528475	IGKV2D-30	A0A075B6S6	120 aa		13.08	□□□□□ -0.32
GSDMD-208	ENST00000528475	RPS29	P62273	56 aa	Known RBP	13.07	□□□□□ -0.32
GSDMD-208	ENST00000528475		A0A1B0GU69	56 aa		13.04	□□□□□ -0.32
GSDMD-208	ENST00000528475	VPS13B	Q7Z7G8	4022 aa		13.04	□□□□□ -0.32
GSDMD-208	ENST00000528475	C7orf65	Q6ZTY9	151 aa		12.99	□□□□□ -0.33
GSDMD-208	ENST00000528475	LINC00304	Q8N9R0	145 aa		12.99	□□□□□ -0.33
GSDMD-208	ENST00000528475	SACS	Q9NZJ4	4579 aa		12.98	□□□□□ -0.33
GSDMD-208	ENST00000528475	SPATA8	Q6RVD6	105 aa		12.92	□□□□□ -0.34
GSDMD-208	ENST00000528475	UQCR11	O14957	56 aa		12.84	□□□□□ -0.35
GSDMD-208	ENST00000528475		A0A1B0GVY2	172 aa		12.83	□□□□□ -0.36
GSDMD-208	ENST00000528475	MIR22HG	Q0VDD5	57 aa		12.8	□□□□□ -0.36
GSDMD-208	ENST00000528475	RBM12B-AS1	Q9P1G2	102 aa		12.78	□□□□□ -0.36
GSDMD-208	ENST00000528475		A8MUU9	505 aa		12.77	□□□□□ -0.36
GSDMD-208	ENST00000528475	C20orf166-AS1	Q96NR2	134 aa		12.77	□□□□□ -0.36
GSDMD-208	ENST00000528475		Q8N1X5	172 aa		12.76	□□□□□ -0.37
GSDMD-208	ENST00000528475	SMR3B	P02814	79 aa	Predicted RBP	12.73	□□□□□ -0.37
GSDMD-208	ENST00000528475	KRTAP10-4	P60372	401 aa	Predicted RBP	12.71	□□□□□ -0.37
GSDMD-208	ENST00000528475	RYR2	Q92736	4967 aa		12.7	□□□□□ -0.38
GSDMD-208	ENST00000528475	PKHD1	P08F94	4074 aa		12.7	□□□□□ -0.38
GSDMD-208	ENST00000528475	PKHD1L1	Q86WI1	4243 aa		12.66	□□□□□ -0.38
GSDMD-208	ENST00000528475	C9orf92	A6NGG3	77 aa		12.65	□□□□□ -0.38
GSDMD-208	ENST00000528475	DYNC1H1	Q14204	4646 aa	Known RBP	12.65	□□□□□ -0.38
GSDMD-208	ENST00000528475	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.58	□□□□□ -0.4
GSDMD-208	ENST00000528475	APOB	P04114	4563 aa	Known RBP	12.58	□□□□□ -0.4
GSDMD-208	ENST00000528475	KRTAP3-1	Q9BYR8	98 aa		12.55	□□□□□ -0.4
GSDMD-208	ENST00000528475	PRAC1	Q96KF2	57 aa		12.47	□□□□□ -0.41
GSDMD-208	ENST00000528475	ADM2	Q7Z4H4	148 aa		12.44	□□□□□ -0.42
GSDMD-208	ENST00000528475	FAT1	Q14517	4588 aa		12.43	□□□□□ -0.42
GSDMD-208	ENST00000528475	COX6B2	Q6YFQ2	88 aa		12.38	□□□□□ -0.43
GSDMD-208	ENST00000528475		H0YAA0	97 aa		12.37	□□□□□ -0.43
GSDMD-208	ENST00000528475		A0A1B0GU33	70 aa		12.33	□□□□□ -0.44
GSDMD-208	ENST00000528475	H1FX-AS1	Q4G0G2	97 aa		12.31	□□□□□ -0.44
GSDMD-208	ENST00000528475	FLG2	Q5D862	2391 aa	Predicted RBP	12.29	□□□□□ -0.44
GSDMD-208	ENST00000528475	RYR3	Q15413	4870 aa		12.28	□□□□□ -0.44
GSDMD-208	ENST00000528475	KRTAP10-8	P60410	259 aa		12.25	□□□□□ -0.45
GSDMD-208	ENST00000528475		Q5VSD8	79 aa		12.18	□□□□□ -0.46
GSDMD-208	ENST00000528475	LINC01554	Q52M75	96 aa		12.16	□□□□□ -0.46
GSDMD-208	ENST00000528475	FAT3	Q8TDW7	4589 aa		12.16	□□□□□ -0.46
GSDMD-208	ENST00000528475		H3BS24	57 aa		12.15	□□□□□ -0.46
GSDMD-208	ENST00000528475	RPL37	P61927	97 aa	Known RBP	12.14	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms