RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
USP47-207ENST00000527733 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
USP47-207ENST00000527733 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
USP47-207ENST00000527733 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
USP47-207ENST00000527733 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
USP47-207ENST00000527733 C4orf26Q17RF5 130 aa8.81□□□□□ -1
USP47-207ENST00000527733 HRES1P13985 223 aa8.78□□□□□ -1
USP47-207ENST00000527733 A8MUN3 132 aa8.78□□□□□ -1
USP47-207ENST00000527733 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
USP47-207ENST00000527733 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
USP47-207ENST00000527733 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
USP47-207ENST00000527733 Q5W150 140 aa8.75□□□□□ -1.01
USP47-207ENST00000527733 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
USP47-207ENST00000527733 KRTAP13-2Q52LG2 175 aa8.73□□□□□ -1.01
USP47-207ENST00000527733 UQCR11O14957 56 aa8.72□□□□□ -1.01
USP47-207ENST00000527733 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
USP47-207ENST00000527733 TGP01266 2768 aa8.71□□□□□ -1.02
USP47-207ENST00000527733 SPINK7P58062 85 aa8.7□□□□□ -1.02
USP47-207ENST00000527733 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
USP47-207ENST00000527733 ANK3Q12955 4377 aaKnown RBP8.68□□□□□ -1.02
USP47-207ENST00000527733 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
USP47-207ENST00000527733 PRO0628Q9UI54 55 aa8.68□□□□□ -1.02
USP47-207ENST00000527733 TRRAPQ9Y4A5 3859 aa8.65□□□□□ -1.02
USP47-207ENST00000527733 Q5XG85 94 aa8.65□□□□□ -1.02
USP47-207ENST00000527733 ZNF469Q96JG9 3925 aaPredicted RBP8.64□□□□□ -1.03
USP47-207ENST00000527733 OXTP01178 125 aa8.64□□□□□ -1.03
USP47-207ENST00000527733 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
USP47-207ENST00000527733 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
USP47-207ENST00000527733 MIR22HGQ0VDD5 57 aa8.59□□□□□ -1.04
USP47-207ENST00000527733 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
USP47-207ENST00000527733 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
USP47-207ENST00000527733 Q1T7F1 81 aa8.5□□□□□ -1.05
USP47-207ENST00000527733 S4R3F8 94 aa8.49□□□□□ -1.05
USP47-207ENST00000527733 M0R2T5 61 aa8.48□□□□□ -1.05
USP47-207ENST00000527733 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
USP47-207ENST00000527733 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
USP47-207ENST00000527733 Q75L30 129 aa8.42□□□□□ -1.06
USP47-207ENST00000527733 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
USP47-207ENST00000527733 A0A0D9SG42 100 aa8.42□□□□□ -1.06
USP47-207ENST00000527733 A0A1B0GU33 70 aa8.42□□□□□ -1.06
USP47-207ENST00000527733 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
USP47-207ENST00000527733 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
USP47-207ENST00000527733 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
USP47-207ENST00000527733 FBN3Q75N90 2809 aa8.37□□□□□ -1.07
USP47-207ENST00000527733 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
USP47-207ENST00000527733 A8MUU9 505 aa8.3□□□□□ -1.08
USP47-207ENST00000527733 C20orf166-AS1Q96NR2 134 aa8.28□□□□□ -1.08
USP47-207ENST00000527733 CRIPTQ9P021 101 aa8.25□□□□□ -1.09
USP47-207ENST00000527733 R4GN34 69 aa8.24□□□□□ -1.09
USP47-207ENST00000527733 H1FX-AS1Q4G0G2 97 aa8.23□□□□□ -1.09
USP47-207ENST00000527733 Q5VV11 94 aa8.22□□□□□ -1.09
USP47-207ENST00000527733 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
USP47-207ENST00000527733 AKAP9Q99996 3911 aa8.18□□□□□ -1.1
USP47-207ENST00000527733 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
USP47-207ENST00000527733 XP32Q5T750 250 aa8.16□□□□□ -1.1
USP47-207ENST00000527733 MEGF8Q7Z7M0 2845 aa8.15□□□□□ -1.1
USP47-207ENST00000527733 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
USP47-207ENST00000527733 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
USP47-207ENST00000527733 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
USP47-207ENST00000527733 M0QZ58 72 aa8.09□□□□□ -1.11
USP47-207ENST00000527733 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
USP47-207ENST00000527733 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
USP47-207ENST00000527733 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
USP47-207ENST00000527733 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
USP47-207ENST00000527733 LCA10Q71F78 164 aa7.99□□□□□ -1.13
USP47-207ENST00000527733 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
USP47-207ENST00000527733 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
USP47-207ENST00000527733 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
USP47-207ENST00000527733 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
USP47-207ENST00000527733 ROMO1P60602 79 aa7.8□□□□□ -1.16
USP47-207ENST00000527733 DNAH9Q9NYC9 4486 aa7.79□□□□□ -1.16
USP47-207ENST00000527733 A8MU10 97 aa7.78□□□□□ -1.16
USP47-207ENST00000527733 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
USP47-207ENST00000527733 DNHD1Q96M86 4753 aa7.71□□□□□ -1.17
USP47-207ENST00000527733 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
USP47-207ENST00000527733 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
USP47-207ENST00000527733 ALMS1Q8TCU4 4167 aa7.57□□□□□ -1.2
USP47-207ENST00000527733 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
USP47-207ENST00000527733 PLECQ15149 4684 aaKnown RBP7.54□□□□□ -1.2
USP47-207ENST00000527733 A6NN06 94 aa7.54□□□□□ -1.2
USP47-207ENST00000527733 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
USP47-207ENST00000527733 ANK2Q01484 3957 aa7.5□□□□□ -1.21
USP47-207ENST00000527733 KRTAP10-10P60014 251 aa7.5□□□□□ -1.21
USP47-207ENST00000527733 P0C880 135 aa7.5□□□□□ -1.21
USP47-207ENST00000527733 DNAH10Q8IVF4 4471 aa7.46□□□□□ -1.22
USP47-207ENST00000527733 H0YAA0 97 aa7.46□□□□□ -1.22
USP47-207ENST00000527733 DNAH5Q8TE73 4624 aa7.46□□□□□ -1.22
USP47-207ENST00000527733 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
USP47-207ENST00000527733 DNAH1Q9P2D7 4330 aa7.42□□□□□ -1.22
USP47-207ENST00000527733 TNP1P09430 55 aa7.41□□□□□ -1.22
USP47-207ENST00000527733 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
USP47-207ENST00000527733 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
USP47-207ENST00000527733 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
USP47-207ENST00000527733 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
USP47-207ENST00000527733 STARD9Q9P2P6 4700 aa7.34□□□□□ -1.23
USP47-207ENST00000527733 LYSTQ99698 3801 aa7.28□□□□□ -1.24
USP47-207ENST00000527733 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
USP47-207ENST00000527733 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
USP47-207ENST00000527733 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.25
USP47-207ENST00000527733 KMT2AQ03164 3969 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms