RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 Q6ZSA8 131 aa10.32□□□□□ -0.76
USH1C-205ENST00000527020 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
USH1C-205ENST00000527020 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
USH1C-205ENST00000527020 KRTAP10-1P60331 282 aa10.31□□□□□ -0.76
USH1C-205ENST00000527020 TP53AIP1Q9HCN2 124 aa10.31□□□□□ -0.76
USH1C-205ENST00000527020 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
USH1C-205ENST00000527020 CD164Q04900 197 aa10.28□□□□□ -0.76
USH1C-205ENST00000527020 MRPL34Q9BQ48 92 aaKnown RBP10.28□□□□□ -0.76
USH1C-205ENST00000527020 SSBP3-AS1Q7Z2R9 100 aa10.27□□□□□ -0.77
USH1C-205ENST00000527020 SPINK6Q6UWN8 80 aa10.26□□□□□ -0.77
USH1C-205ENST00000527020 NDUFS5O43920 106 aa10.25□□□□□ -0.77
USH1C-205ENST00000527020 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
USH1C-205ENST00000527020 Q1T7F1 81 aa10.22□□□□□ -0.77
USH1C-205ENST00000527020 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
USH1C-205ENST00000527020 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
USH1C-205ENST00000527020 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
USH1C-205ENST00000527020 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
USH1C-205ENST00000527020 KRTAP13-3Q3SY46 172 aa10.15□□□□□ -0.79
USH1C-205ENST00000527020 Q5W150 140 aa10.15□□□□□ -0.79
USH1C-205ENST00000527020 PRO0628Q9UI54 55 aa10.13□□□□□ -0.79
USH1C-205ENST00000527020 SACSQ9NZJ4 4579 aa10.11□□□□□ -0.79
USH1C-205ENST00000527020 C8orf87E5RJ46 101 aa10.11□□□□□ -0.79
USH1C-205ENST00000527020 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
USH1C-205ENST00000527020 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
USH1C-205ENST00000527020 COA5Q86WW8 74 aa10.09□□□□□ -0.79
USH1C-205ENST00000527020 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
USH1C-205ENST00000527020 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
USH1C-205ENST00000527020 PSPHP1O15172 72 aa10.08□□□□□ -0.8
USH1C-205ENST00000527020 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
USH1C-205ENST00000527020 LINC00313P59037 77 aa10.05□□□□□ -0.8
USH1C-205ENST00000527020 V9GYY9 64 aa10.04□□□□□ -0.8
USH1C-205ENST00000527020 A8MUN3 132 aa10.02□□□□□ -0.8
USH1C-205ENST00000527020 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
USH1C-205ENST00000527020 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
USH1C-205ENST00000527020 HRES1P13985 223 aa9.98□□□□□ -0.81
USH1C-205ENST00000527020 LIMD2Q9BT23 127 aa9.98□□□□□ -0.81
USH1C-205ENST00000527020 Q5VV11 94 aa9.98□□□□□ -0.81
USH1C-205ENST00000527020 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
USH1C-205ENST00000527020 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
USH1C-205ENST00000527020 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
USH1C-205ENST00000527020 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
USH1C-205ENST00000527020 PRR15LQ9BU68 103 aa9.91□□□□□ -0.82
USH1C-205ENST00000527020 SPINK1P00995 79 aa9.9□□□□□ -0.82
USH1C-205ENST00000527020 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
USH1C-205ENST00000527020 IGKV2-30P06310 120 aa9.88□□□□□ -0.83
USH1C-205ENST00000527020 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
USH1C-205ENST00000527020 APOBP04114 4563 aaKnown RBP9.86□□□□□ -0.83
USH1C-205ENST00000527020 SPAG11AQ6PDA7 123 aa9.86□□□□□ -0.83
USH1C-205ENST00000527020 A0A1B0GVY2 172 aa9.85□□□□□ -0.83
USH1C-205ENST00000527020 LINC01558Q9Y6Z2 57 aa9.85□□□□□ -0.83
USH1C-205ENST00000527020 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
USH1C-205ENST00000527020 FAT1Q14517 4588 aa9.83□□□□□ -0.84
USH1C-205ENST00000527020 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
USH1C-205ENST00000527020 Q75L30 129 aa9.83□□□□□ -0.84
USH1C-205ENST00000527020 LINC00304Q8N9R0 145 aa9.82□□□□□ -0.84
USH1C-205ENST00000527020 DMAC1Q96GE9 116 aa9.82□□□□□ -0.84
USH1C-205ENST00000527020 A8MU10 97 aa9.82□□□□□ -0.84
USH1C-205ENST00000527020 ACYP2P14621 99 aa9.8□□□□□ -0.84
USH1C-205ENST00000527020 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
USH1C-205ENST00000527020 PKHD1L1Q86WI1 4243 aa9.8□□□□□ -0.84
USH1C-205ENST00000527020 RPS29P62273 56 aaKnown RBP9.8□□□□□ -0.84
USH1C-205ENST00000527020 RYR2Q92736 4967 aa9.77□□□□□ -0.85
USH1C-205ENST00000527020 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
USH1C-205ENST00000527020 LCA10Q71F78 164 aa9.71□□□□□ -0.86
USH1C-205ENST00000527020 A6NED7 52 aa9.7□□□□□ -0.86
USH1C-205ENST00000527020 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
USH1C-205ENST00000527020 SPINK7P58062 85 aa9.64□□□□□ -0.87
USH1C-205ENST00000527020 CDC42SE1Q9NRR8 79 aa9.61□□□□□ -0.87
USH1C-205ENST00000527020 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
USH1C-205ENST00000527020 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
USH1C-205ENST00000527020 A8MUU9 505 aa9.57□□□□□ -0.88
USH1C-205ENST00000527020 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
USH1C-205ENST00000527020 ATP11AUNQ6ZP68 121 aa9.54□□□□□ -0.88
USH1C-205ENST00000527020 SPTSSBQ8NFR3 76 aa9.53□□□□□ -0.88
USH1C-205ENST00000527020 PMAIP1Q13794 54 aa9.52□□□□□ -0.89
USH1C-205ENST00000527020 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
USH1C-205ENST00000527020 Q8N1X5 172 aa9.51□□□□□ -0.89
USH1C-205ENST00000527020 A0A1B0GU69 56 aa9.48□□□□□ -0.89
USH1C-205ENST00000527020 TNXBP22105 4242 aa9.48□□□□□ -0.89
USH1C-205ENST00000527020 LRP1Q07954 4544 aaKnown RBP9.47□□□□□ -0.89
USH1C-205ENST00000527020 FAT3Q8TDW7 4589 aa9.47□□□□□ -0.89
USH1C-205ENST00000527020 HSPG2P98160 4391 aa9.46□□□□□ -0.89
USH1C-205ENST00000527020 A6NN06 94 aa9.43□□□□□ -0.9
USH1C-205ENST00000527020 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
USH1C-205ENST00000527020 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
USH1C-205ENST00000527020 RYR3Q15413 4870 aa9.38□□□□□ -0.91
USH1C-205ENST00000527020 Q5VSD8 79 aa9.36□□□□□ -0.91
USH1C-205ENST00000527020 RYR1P21817 5038 aa9.33□□□□□ -0.92
USH1C-205ENST00000527020 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
USH1C-205ENST00000527020 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
USH1C-205ENST00000527020 KTN1-AS1Q86SY8 53 aa9.3□□□□□ -0.92
USH1C-205ENST00000527020 UQCR11O14957 56 aa9.29□□□□□ -0.92
USH1C-205ENST00000527020 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
USH1C-205ENST00000527020 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
USH1C-205ENST00000527020 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
USH1C-205ENST00000527020 SEC61GP60059 68 aa9.19□□□□□ -0.94
USH1C-205ENST00000527020 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
USH1C-205ENST00000527020 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
USH1C-205ENST00000527020 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
USH1C-205ENST00000527020 XP32Q5T750 250 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms