RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
COLCA2-202ENST00000526216 NREPQ16612 68 aa8.2□□□□□ -1.1
COLCA2-202ENST00000526216 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
COLCA2-202ENST00000526216 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
COLCA2-202ENST00000526216 DEFB116Q30KQ4 102 aa8.19□□□□□ -1.1
COLCA2-202ENST00000526216 UBL5Q9BZL1 73 aa8.19□□□□□ -1.1
COLCA2-202ENST00000526216 SS18L2Q9UHA2 77 aa8.19□□□□□ -1.1
COLCA2-202ENST00000526216 LIMD2Q9BT23 127 aa8.18□□□□□ -1.1
COLCA2-202ENST00000526216 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
COLCA2-202ENST00000526216 DMBT1Q9UGM3 2413 aaPredicted RBP8.16□□□□□ -1.1
COLCA2-202ENST00000526216 KRTAP5-3Q6L8H2 238 aa8.14□□□□□ -1.11
COLCA2-202ENST00000526216 LINC00643Q86TS7 51 aa8.14□□□□□ -1.11
COLCA2-202ENST00000526216 IGKV3D-7A0A0C4DH55 119 aa8.13□□□□□ -1.11
COLCA2-202ENST00000526216 DSCR10P59022 87 aa8.12□□□□□ -1.11
COLCA2-202ENST00000526216 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
COLCA2-202ENST00000526216 BPY2O14599 106 aa8.1□□□□□ -1.11
COLCA2-202ENST00000526216 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
COLCA2-202ENST00000526216 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
COLCA2-202ENST00000526216 SIGMAR1Q99720 223 aa8.1□□□□□ -1.11
COLCA2-202ENST00000526216 CXCL6P80162 114 aa8.08□□□□□ -1.12
COLCA2-202ENST00000526216 Q8N9L7 120 aa8.08□□□□□ -1.12
COLCA2-202ENST00000526216 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
COLCA2-202ENST00000526216 J3KT08 172 aa8.06□□□□□ -1.12
COLCA2-202ENST00000526216 K7EQZ3 153 aa8.05□□□□□ -1.12
COLCA2-202ENST00000526216 A8MWP4 228 aa8.04□□□□□ -1.12
COLCA2-202ENST00000526216 HERC1Q15751 4861 aa8.03□□□□□ -1.12
COLCA2-202ENST00000526216 A0A1B0GVX0 72 aa8.02□□□□□ -1.13
COLCA2-202ENST00000526216 PRR15Q8IV56 129 aa8.02□□□□□ -1.13
COLCA2-202ENST00000526216 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
COLCA2-202ENST00000526216 A0A087WVE0 104 aa8□□□□□ -1.13
COLCA2-202ENST00000526216 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
COLCA2-202ENST00000526216 MMP24-AS1A0A0U1RRL7 71 aa7.98□□□□□ -1.13
COLCA2-202ENST00000526216 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
COLCA2-202ENST00000526216 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
COLCA2-202ENST00000526216 NDUFB1O75438 58 aa7.96□□□□□ -1.14
COLCA2-202ENST00000526216 C8orf17Q9NRJ1 99 aa7.96□□□□□ -1.14
COLCA2-202ENST00000526216 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
COLCA2-202ENST00000526216 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
COLCA2-202ENST00000526216 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
COLCA2-202ENST00000526216 PRR4Q16378 134 aa7.93□□□□□ -1.14
COLCA2-202ENST00000526216 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
COLCA2-202ENST00000526216 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
COLCA2-202ENST00000526216 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
COLCA2-202ENST00000526216 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
COLCA2-202ENST00000526216 WFDC13Q8IUB5 93 aa7.91□□□□□ -1.14
COLCA2-202ENST00000526216 LPAP08519 4548 aa7.91□□□□□ -1.14
COLCA2-202ENST00000526216 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
COLCA2-202ENST00000526216 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
COLCA2-202ENST00000526216 LINC00313P59037 77 aa7.89□□□□□ -1.15
COLCA2-202ENST00000526216 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
COLCA2-202ENST00000526216 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
COLCA2-202ENST00000526216 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
COLCA2-202ENST00000526216 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
COLCA2-202ENST00000526216 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
COLCA2-202ENST00000526216 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
COLCA2-202ENST00000526216 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
COLCA2-202ENST00000526216 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
COLCA2-202ENST00000526216 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
COLCA2-202ENST00000526216 LRP2P98164 4655 aa7.79□□□□□ -1.16
COLCA2-202ENST00000526216 A8MUU9 505 aa7.78□□□□□ -1.16
COLCA2-202ENST00000526216 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
COLCA2-202ENST00000526216 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
COLCA2-202ENST00000526216 OCR1Q9BZK8 76 aa7.75□□□□□ -1.17
COLCA2-202ENST00000526216 NDUFS5O43920 106 aa7.73□□□□□ -1.17
COLCA2-202ENST00000526216 SCGB1A1P11684 91 aa7.73□□□□□ -1.17
COLCA2-202ENST00000526216 Q75L30 129 aa7.73□□□□□ -1.17
COLCA2-202ENST00000526216 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
COLCA2-202ENST00000526216 ATOX1O00244 68 aa7.71□□□□□ -1.18
COLCA2-202ENST00000526216 Q5W150 140 aa7.7□□□□□ -1.18
COLCA2-202ENST00000526216 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
COLCA2-202ENST00000526216 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
COLCA2-202ENST00000526216 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
COLCA2-202ENST00000526216 UQCRQO14949 82 aa7.65□□□□□ -1.18
COLCA2-202ENST00000526216 LCE5AQ5TCM9 118 aa7.63□□□□□ -1.19
COLCA2-202ENST00000526216 SMIM20Q8N5G0 67 aa7.63□□□□□ -1.19
COLCA2-202ENST00000526216 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
COLCA2-202ENST00000526216 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
COLCA2-202ENST00000526216 H0Y9P7 68 aa7.6□□□□□ -1.19
COLCA2-202ENST00000526216 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
COLCA2-202ENST00000526216 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
COLCA2-202ENST00000526216 UBR4Q5T4S7 5183 aa7.58□□□□□ -1.2
COLCA2-202ENST00000526216 ATP11AUNQ6ZP68 121 aa7.57□□□□□ -1.2
COLCA2-202ENST00000526216 COX7CP15954 63 aa7.56□□□□□ -1.2
COLCA2-202ENST00000526216 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
COLCA2-202ENST00000526216 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
COLCA2-202ENST00000526216 A0A0U1RQV1 116 aa7.52□□□□□ -1.2
COLCA2-202ENST00000526216 IGKV2-30P06310 120 aa7.52□□□□□ -1.2
COLCA2-202ENST00000526216 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.2
COLCA2-202ENST00000526216 LINC00208Q96KT6 92 aa7.52□□□□□ -1.2
COLCA2-202ENST00000526216 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.2
COLCA2-202ENST00000526216 MP68P56378 58 aa7.52□□□□□ -1.21
COLCA2-202ENST00000526216 CCDC179H3BU77 68 aa7.51□□□□□ -1.21
COLCA2-202ENST00000526216 C20orf197Q8N268 126 aa7.51□□□□□ -1.21
COLCA2-202ENST00000526216 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
COLCA2-202ENST00000526216 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
COLCA2-202ENST00000526216 H3BPC8 53 aa7.49□□□□□ -1.21
COLCA2-202ENST00000526216 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
COLCA2-202ENST00000526216 LOC101927531A0A1B0GV80 90 aa7.48□□□□□ -1.21
COLCA2-202ENST00000526216 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
COLCA2-202ENST00000526216 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms