RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 C1orf195Q5TG92 126 aa11.1□□□□□ -0.63
TM9SF1-203ENST00000524835 NOTCH2NLQ7Z3S9 236 aa11.1□□□□□ -0.63
TM9SF1-203ENST00000524835 TMEM258P61165 79 aa11.09□□□□□ -0.63
TM9SF1-203ENST00000524835 LIMD2Q9BT23 127 aa11.09□□□□□ -0.63
TM9SF1-203ENST00000524835 HSPG2P98160 4391 aa11.08□□□□□ -0.64
TM9SF1-203ENST00000524835 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
TM9SF1-203ENST00000524835 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
TM9SF1-203ENST00000524835 SPINK1P00995 79 aa11.06□□□□□ -0.64
TM9SF1-203ENST00000524835 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
TM9SF1-203ENST00000524835 NDUFC1O43677 76 aa11.03□□□□□ -0.64
TM9SF1-203ENST00000524835 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
TM9SF1-203ENST00000524835 ZCCHC13Q8WW36 166 aaKnown RBP11.02□□□□□ -0.65
TM9SF1-203ENST00000524835 MRPL34Q9BQ48 92 aaKnown RBP11.01□□□□□ -0.65
TM9SF1-203ENST00000524835 RYR1P21817 5038 aa11.01□□□□□ -0.65
TM9SF1-203ENST00000524835 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
TM9SF1-203ENST00000524835 RPS29P62273 56 aaKnown RBP11□□□□□ -0.65
TM9SF1-203ENST00000524835 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
TM9SF1-203ENST00000524835 C8orf87E5RJ46 101 aa10.99□□□□□ -0.65
TM9SF1-203ENST00000524835 MP68P56378 58 aa10.97□□□□□ -0.65
TM9SF1-203ENST00000524835 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
TM9SF1-203ENST00000524835 H0Y9P7 68 aa10.96□□□□□ -0.65
TM9SF1-203ENST00000524835 Q5VSD8 79 aa10.96□□□□□ -0.66
TM9SF1-203ENST00000524835 FAM236DA0A1B0GTK5 79 aa10.94□□□□□ -0.66
TM9SF1-203ENST00000524835 FAM236CP0DP71 79 aa10.94□□□□□ -0.66
TM9SF1-203ENST00000524835 TRAV22A0A0B4J277 110 aa10.94□□□□□ -0.66
TM9SF1-203ENST00000524835 NDUFS5O43920 106 aa10.93□□□□□ -0.66
TM9SF1-203ENST00000524835 LINC00313P59037 77 aa10.92□□□□□ -0.66
TM9SF1-203ENST00000524835 LINC00208Q96KT6 92 aa10.92□□□□□ -0.66
TM9SF1-203ENST00000524835 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
TM9SF1-203ENST00000524835 H3BPC8 53 aa10.91□□□□□ -0.66
TM9SF1-203ENST00000524835 EPPK1P58107 5090 aaKnown RBP10.9□□□□□ -0.67
TM9SF1-203ENST00000524835 KRTAP17-1Q9BYP8 105 aa10.9□□□□□ -0.67
TM9SF1-203ENST00000524835 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
TM9SF1-203ENST00000524835 C1orf64Q8NEQ6 169 aa10.86□□□□□ -0.67
TM9SF1-203ENST00000524835 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
TM9SF1-203ENST00000524835 ATP5EP56381 51 aaPredicted RBP10.84□□□□□ -0.67
TM9SF1-203ENST00000524835 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
TM9SF1-203ENST00000524835 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
TM9SF1-203ENST00000524835 KRTAP13-3Q3SY46 172 aa10.81□□□□□ -0.68
TM9SF1-203ENST00000524835 TNXBP22105 4242 aa10.81□□□□□ -0.68
TM9SF1-203ENST00000524835 Q5W150 140 aa10.8□□□□□ -0.68
TM9SF1-203ENST00000524835 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
TM9SF1-203ENST00000524835 OXTP01178 125 aa10.77□□□□□ -0.69
TM9SF1-203ENST00000524835 Q8N1X5 172 aa10.76□□□□□ -0.69
TM9SF1-203ENST00000524835 FLG2Q5D862 2391 aaPredicted RBP10.76□□□□□ -0.69
TM9SF1-203ENST00000524835 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
TM9SF1-203ENST00000524835 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
TM9SF1-203ENST00000524835 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
TM9SF1-203ENST00000524835 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
TM9SF1-203ENST00000524835 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
TM9SF1-203ENST00000524835 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
TM9SF1-203ENST00000524835 PRR4Q16378 134 aa10.66□□□□□ -0.7
TM9SF1-203ENST00000524835 PCOTHQ58A44 107 aa10.66□□□□□ -0.7
TM9SF1-203ENST00000524835 MYCBP2O75592 4640 aa10.65□□□□□ -0.71
TM9SF1-203ENST00000524835 C9orf92A6NGG3 77 aa10.62□□□□□ -0.71
TM9SF1-203ENST00000524835 MT1HL1P0DM35 61 aa10.6□□□□□ -0.71
TM9SF1-203ENST00000524835 IGLV7-46A0A075B6I9 117 aa10.6□□□□□ -0.71
TM9SF1-203ENST00000524835 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
TM9SF1-203ENST00000524835 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
TM9SF1-203ENST00000524835 A8MUU9 505 aa10.54□□□□□ -0.72
TM9SF1-203ENST00000524835 DMBT1Q9UGM3 2413 aaPredicted RBP10.54□□□□□ -0.72
TM9SF1-203ENST00000524835 FP248Q71RG6 208 aaPredicted RBP10.5□□□□□ -0.73
TM9SF1-203ENST00000524835 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
TM9SF1-203ENST00000524835 SMIM26A0A096LP01 95 aa10.49□□□□□ -0.73
TM9SF1-203ENST00000524835 IGKV2D-30A0A075B6S6 120 aa10.46□□□□□ -0.73
TM9SF1-203ENST00000524835 HRES1P13985 223 aa10.46□□□□□ -0.73
TM9SF1-203ENST00000524835 Q75L30 129 aa10.42□□□□□ -0.74
TM9SF1-203ENST00000524835 COA5Q86WW8 74 aa10.39□□□□□ -0.75
TM9SF1-203ENST00000524835 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
TM9SF1-203ENST00000524835 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
TM9SF1-203ENST00000524835 BIRC6Q9NR09 4857 aa10.35□□□□□ -0.75
TM9SF1-203ENST00000524835 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
TM9SF1-203ENST00000524835 HERC2O95714 4834 aa10.32□□□□□ -0.76
TM9SF1-203ENST00000524835 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
TM9SF1-203ENST00000524835 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
TM9SF1-203ENST00000524835 XP32Q5T750 250 aa10.3□□□□□ -0.76
TM9SF1-203ENST00000524835 ACYP2P14621 99 aa10.28□□□□□ -0.76
TM9SF1-203ENST00000524835 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.76
TM9SF1-203ENST00000524835 Q1T7F1 81 aa10.25□□□□□ -0.77
TM9SF1-203ENST00000524835 SPINK7P58062 85 aa10.25□□□□□ -0.77
TM9SF1-203ENST00000524835 ATP11AUNQ6ZP68 121 aa10.23□□□□□ -0.77
TM9SF1-203ENST00000524835 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
TM9SF1-203ENST00000524835 V9GYY9 64 aa10.15□□□□□ -0.79
TM9SF1-203ENST00000524835 A8MUN3 132 aa10.13□□□□□ -0.79
TM9SF1-203ENST00000524835 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
TM9SF1-203ENST00000524835 J3QL48 77 aa10.1□□□□□ -0.79
TM9SF1-203ENST00000524835 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
TM9SF1-203ENST00000524835 LRP2P98164 4655 aa10.08□□□□□ -0.8
TM9SF1-203ENST00000524835 PSPHP1O15172 72 aa10.07□□□□□ -0.8
TM9SF1-203ENST00000524835 LPAP08519 4548 aa10.07□□□□□ -0.8
TM9SF1-203ENST00000524835 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
TM9SF1-203ENST00000524835 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.81
TM9SF1-203ENST00000524835 PRR15LQ9BU68 103 aa10.01□□□□□ -0.81
TM9SF1-203ENST00000524835 Q5VV11 94 aa9.99□□□□□ -0.81
TM9SF1-203ENST00000524835 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
TM9SF1-203ENST00000524835 SPTSSBQ8NFR3 76 aa9.83□□□□□ -0.84
TM9SF1-203ENST00000524835 BRK1Q8WUW1 75 aa9.82□□□□□ -0.84
TM9SF1-203ENST00000524835 A0A1B0GU69 56 aa9.8□□□□□ -0.84
TM9SF1-203ENST00000524835 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
TM9SF1-203ENST00000524835 HERC1Q15751 4861 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms