RNA–Protein interactions for RNA: ENST00000523557.1

LINC01608-201, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 544 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-201ENST00000523557 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
LINC01608-201ENST00000523557 PLNP26678 52 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 RPS27P42677 84 aaKnown RBP0.32□□□□□ -2.36
LINC01608-201ENST00000523557 WT1-ASQ06250 92 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 RPS27LQ71UM5 84 aaKnown RBP0.32□□□□□ -2.36
LINC01608-201ENST00000523557 LINC00308Q8TCZ7 52 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 GCN1Q92616 2671 aaKnown RBP0.32□□□□□ -2.36
LINC01608-201ENST00000523557 CLASP1Q7Z460 1538 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 HERC1Q15751 4861 aa0.32□□□□□ -2.36
LINC01608-201ENST00000523557 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
LINC01608-201ENST00000523557 AGLP35573 1532 aa0.31□□□□□ -2.36
LINC01608-201ENST00000523557 HYDINQ4G0P3 5121 aa0.31□□□□□ -2.36
LINC01608-201ENST00000523557 DSPP15924 2871 aaKnown RBP0.31□□□□□ -2.36
LINC01608-201ENST00000523557 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
LINC01608-201ENST00000523557 PRLHP81277 87 aa0.3□□□□□ -2.36
LINC01608-201ENST00000523557 S4R3F8 94 aa0.3□□□□□ -2.36
LINC01608-201ENST00000523557 WDFY4Q6ZS81 3184 aa0.3□□□□□ -2.36
LINC01608-201ENST00000523557 CDC42BPAQ5VT25 1732 aa0.3□□□□□ -2.36
LINC01608-201ENST00000523557 TOGARAM1Q9Y4F4 1720 aa0.3□□□□□ -2.36
LINC01608-201ENST00000523557 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
LINC01608-201ENST00000523557 ITPR1Q14643 2758 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 CEP290O15078 2479 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 TNXBP22105 4242 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 PRRC2CQ9Y520 2896 aaKnown RBP0.29□□□□□ -2.36
LINC01608-201ENST00000523557 EFCAB6Q5THR3 1501 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 PCNX1Q96RV3 2341 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 H3BUA1 57 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 ZANQ9Y493 2812 aa0.29□□□□□ -2.36
LINC01608-201ENST00000523557 ZZEF1O43149 2961 aa0.28□□□□□ -2.36
LINC01608-201ENST00000523557 FLNBO75369 2602 aaKnown RBP0.28□□□□□ -2.36
LINC01608-201ENST00000523557 DEFB106AQ8N104 65 aa0.28□□□□□ -2.36
LINC01608-201ENST00000523557 RYR3Q15413 4870 aa0.28□□□□□ -2.36
LINC01608-201ENST00000523557 AKAP13Q12802 2813 aa0.28□□□□□ -2.36
LINC01608-201ENST00000523557 HMCN2Q8NDA2 5059 aa0.28□□□□□ -2.37
LINC01608-201ENST00000523557 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.37
LINC01608-201ENST00000523557 ABCC8Q09428 1581 aa0.28□□□□□ -2.37
LINC01608-201ENST00000523557 TIMM8BQ9Y5J9 83 aaPredicted RBP0.27□□□□□ -2.37
LINC01608-201ENST00000523557 TNRC18O15417 2968 aaPredicted RBP0.26□□□□□ -2.37
LINC01608-201ENST00000523557 SPRR2DP22532 72 aa0.26□□□□□ -2.37
LINC01608-201ENST00000523557 ABRACLQ9P1F3 81 aa0.26□□□□□ -2.37
LINC01608-201ENST00000523557 FAM186AA6NE01 2351 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 ABCA5Q8WWZ7 1642 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 NRXN3Q9Y4C0 1643 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 SMIM27A0A1W2PRY6 76 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 LINC01546A6NGU7 62 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 LPAP08519 4548 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 MGAM2Q2M2H8 2515 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 LYSTQ99698 3801 aa0.25□□□□□ -2.37
LINC01608-201ENST00000523557 HECTD4Q9Y4D8 3996 aa0.24□□□□□ -2.37
LINC01608-201ENST00000523557 FLNCQ14315 2725 aa0.24□□□□□ -2.37
LINC01608-201ENST00000523557 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
LINC01608-201ENST00000523557 A0A1B0GUL6 1792 aa0.24□□□□□ -2.37
LINC01608-201ENST00000523557 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
LINC01608-201ENST00000523557 NOP10Q9NPE3 64 aaKnown RBP0.23□□□□□ -2.37
LINC01608-201ENST00000523557 A0A0C4DFX4 3053 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 DDX60Q8IY21 1712 aaKnown RBP0.22□□□□□ -2.37
LINC01608-201ENST00000523557 NF1P21359 2839 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 LMO7Q8WWI1 1683 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 IGLV5-48A0A075B6I7 105 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 C9orf92A6NGG3 77 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 SPRR2BP35325 72 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 TFF3Q07654 80 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 TOMM5Q8N4H5 51 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 SMIM2Q9BVW6 85 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 KAAG1Q9UBP8 84 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 COL12A1Q99715 3063 aa0.22□□□□□ -2.37
LINC01608-201ENST00000523557 CELSR3Q9NYQ7 3312 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 UTP20O75691 2785 aaKnown RBP0.21□□□□□ -2.38
LINC01608-201ENST00000523557 TGP01266 2768 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 H3BNG1 76 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 WFDC10BQ8IUB3 73 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 CEP295Q9C0D2 2601 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 MAP1AP78559 2803 aaPredicted RBP0.21□□□□□ -2.38
LINC01608-201ENST00000523557 MYO9AB2RTY4 2548 aa0.21□□□□□ -2.38
LINC01608-201ENST00000523557 TLN1Q9Y490 2541 aaKnown RBP0.21□□□□□ -2.38
LINC01608-201ENST00000523557 FLGP20930 4061 aaPredicted RBP0.2□□□□□ -2.38
LINC01608-201ENST00000523557 USH2AO75445 5202 aa0.2□□□□□ -2.38
LINC01608-201ENST00000523557 NBEAL1Q6ZS30 2694 aa0.2□□□□□ -2.38
LINC01608-201ENST00000523557 MXRA5Q9NR99 2828 aa0.2□□□□□ -2.38
LINC01608-201ENST00000523557 VPS13BQ7Z7G8 4022 aa0.2□□□□□ -2.38
LINC01608-201ENST00000523557 PKD1P98161 4303 aa0.19□□□□□ -2.38
LINC01608-201ENST00000523557 SRRM2Q9UQ35 2752 aaKnown RBP0.19□□□□□ -2.38
LINC01608-201ENST00000523557 KIF21BO75037 1637 aa0.19□□□□□ -2.38
LINC01608-201ENST00000523557 CFAP46Q8IYW2 2715 aa0.19□□□□□ -2.38
LINC01608-201ENST00000523557 ACACAQ13085 2346 aa0.19□□□□□ -2.38
LINC01608-201ENST00000523557 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
LINC01608-201ENST00000523557 IQGAP1P46940 1657 aa0.18□□□□□ -2.38
LINC01608-201ENST00000523557 TEX15Q9BXT5 2789 aa0.18□□□□□ -2.38
LINC01608-201ENST00000523557 IQGAP2Q13576 1575 aa0.18□□□□□ -2.38
LINC01608-201ENST00000523557 DNAH3Q8TD57 4116 aa0.18□□□□□ -2.38
LINC01608-201ENST00000523557 KALRNO60229 2985 aa0.17□□□□□ -2.38
LINC01608-201ENST00000523557 MMP24-AS1A0A0U1RRL7 71 aa0.17□□□□□ -2.38
LINC01608-201ENST00000523557 BIRC6Q9NR09 4857 aa0.17□□□□□ -2.38
LINC01608-201ENST00000523557 MTORP42345 2549 aa0.17□□□□□ -2.38
LINC01608-201ENST00000523557 AKAP9Q99996 3911 aa0.16□□□□□ -2.38
LINC01608-201ENST00000523557 SRCAPQ6ZRS2 3230 aa0.16□□□□□ -2.38
LINC01608-201ENST00000523557 DEFB131AP59861 70 aa0.16□□□□□ -2.38
LINC01608-201ENST00000523557 FAM208AQ9UK61 1670 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms