RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
SCARNA6.1-201ENST00000516989 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
SCARNA6.1-201ENST00000516989 ANKRD29Q8N6D5 301 aa3.28□□□□□ -1.88
SCARNA6.1-201ENST00000516989 LIMD2Q9BT23 127 aa3.28□□□□□ -1.88
SCARNA6.1-201ENST00000516989 C9JAW5 83 aa3.27□□□□□ -1.89
SCARNA6.1-201ENST00000516989 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
SCARNA6.1-201ENST00000516989 SPCS1Q9Y6A9 102 aa3.27□□□□□ -1.89
SCARNA6.1-201ENST00000516989 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
SCARNA6.1-201ENST00000516989 FP248Q71RG6 208 aaPredicted RBP3.26□□□□□ -1.89
SCARNA6.1-201ENST00000516989 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
SCARNA6.1-201ENST00000516989 A0A1W2PNM2 257 aa3.25□□□□□ -1.89
SCARNA6.1-201ENST00000516989 Q5XG85 94 aa3.25□□□□□ -1.89
SCARNA6.1-201ENST00000516989 TEN1Q86WV5 123 aa3.25□□□□□ -1.89
SCARNA6.1-201ENST00000516989 VPS25Q9BRG1 176 aa3.25□□□□□ -1.89
SCARNA6.1-201ENST00000516989 A0A087WSZ3 146 aa3.24□□□□□ -1.89
SCARNA6.1-201ENST00000516989 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
SCARNA6.1-201ENST00000516989 CCKP06307 115 aa3.24□□□□□ -1.89
SCARNA6.1-201ENST00000516989 C1orf195Q5TG92 126 aa3.24□□□□□ -1.89
SCARNA6.1-201ENST00000516989 Q6Q795 121 aa3.24□□□□□ -1.89
SCARNA6.1-201ENST00000516989 MT3P25713 68 aa3.23□□□□□ -1.89
SCARNA6.1-201ENST00000516989 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
SCARNA6.1-201ENST00000516989 H3BT86 120 aa3.22□□□□□ -1.89
SCARNA6.1-201ENST00000516989 GTF2H5Q6ZYL4 71 aa3.22□□□□□ -1.89
SCARNA6.1-201ENST00000516989 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
SCARNA6.1-201ENST00000516989 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
SCARNA6.1-201ENST00000516989 K7EP34 96 aa3.21□□□□□ -1.9
SCARNA6.1-201ENST00000516989 TPRXLQ17RH7 258 aa3.21□□□□□ -1.9
SCARNA6.1-201ENST00000516989 ASB16-AS1Q495Z4 193 aa3.21□□□□□ -1.9
SCARNA6.1-201ENST00000516989 LPAP08519 4548 aa3.21□□□□□ -1.9
SCARNA6.1-201ENST00000516989 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
SCARNA6.1-201ENST00000516989 PDE6GP18545 87 aa3.2□□□□□ -1.9
SCARNA6.1-201ENST00000516989 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
SCARNA6.1-201ENST00000516989 LOC110117498A0A087WWA1 95 aa3.19□□□□□ -1.9
SCARNA6.1-201ENST00000516989 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
SCARNA6.1-201ENST00000516989 Q6ZQT0 140 aa3.19□□□□□ -1.9
SCARNA6.1-201ENST00000516989 OBSCN-AS1Q96MR7 158 aa3.19□□□□□ -1.9
SCARNA6.1-201ENST00000516989 LRP2P98164 4655 aa3.18□□□□□ -1.9
SCARNA6.1-201ENST00000516989 IGKV4-1P06312 121 aa3.18□□□□□ -1.9
SCARNA6.1-201ENST00000516989 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
SCARNA6.1-201ENST00000516989 PRO0461Q9UI25 63 aa3.18□□□□□ -1.9
SCARNA6.1-201ENST00000516989 F8W1H4 67 aa3.17□□□□□ -1.9
SCARNA6.1-201ENST00000516989 Q96NJ1 140 aa3.17□□□□□ -1.9
SCARNA6.1-201ENST00000516989 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
SCARNA6.1-201ENST00000516989 LINC00472Q9H8W2 130 aa3.17□□□□□ -1.9
SCARNA6.1-201ENST00000516989 A0A1B0GW54 56 aa3.16□□□□□ -1.9
SCARNA6.1-201ENST00000516989 NREPQ16612 68 aa3.16□□□□□ -1.9
SCARNA6.1-201ENST00000516989 A0A1B0GV90 55 aa3.15□□□□□ -1.91
SCARNA6.1-201ENST00000516989 IGHV6-1A0A0B4J1U7 121 aa3.14□□□□□ -1.91
SCARNA6.1-201ENST00000516989 DSCR10P59022 87 aa3.14□□□□□ -1.91
SCARNA6.1-201ENST00000516989 LINC00313P59037 77 aa3.14□□□□□ -1.91
SCARNA6.1-201ENST00000516989 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
SCARNA6.1-201ENST00000516989 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
SCARNA6.1-201ENST00000516989 J3KT08 172 aa3.13□□□□□ -1.91
SCARNA6.1-201ENST00000516989 NDUFB1O75438 58 aa3.13□□□□□ -1.91
SCARNA6.1-201ENST00000516989 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
SCARNA6.1-201ENST00000516989 PCOTHQ58A44 107 aa3.12□□□□□ -1.91
SCARNA6.1-201ENST00000516989 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
SCARNA6.1-201ENST00000516989 BPY2O14599 106 aa3.11□□□□□ -1.91
SCARNA6.1-201ENST00000516989 RPL37P61927 97 aaKnown RBP3.11□□□□□ -1.91
SCARNA6.1-201ENST00000516989 IGKV3D-7A0A0C4DH55 119 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 A8MWP4 228 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 ATP11AUNQ6ZP68 121 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 LINC00846Q9NV44 126 aa3.1□□□□□ -1.91
SCARNA6.1-201ENST00000516989 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
SCARNA6.1-201ENST00000516989 A8MUU9 505 aa3.08□□□□□ -1.92
SCARNA6.1-201ENST00000516989 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
SCARNA6.1-201ENST00000516989 C20orf166-AS1Q96NR2 134 aa3.08□□□□□ -1.92
SCARNA6.1-201ENST00000516989 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
SCARNA6.1-201ENST00000516989 K7EQZ3 153 aa3.07□□□□□ -1.92
SCARNA6.1-201ENST00000516989 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
SCARNA6.1-201ENST00000516989 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
SCARNA6.1-201ENST00000516989 ACYP1P07311 99 aa3.06□□□□□ -1.92
SCARNA6.1-201ENST00000516989 Q8N9L7 120 aa3.06□□□□□ -1.92
SCARNA6.1-201ENST00000516989 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
SCARNA6.1-201ENST00000516989 hDV103S1A0JD37 113 aa3.05□□□□□ -1.92
SCARNA6.1-201ENST00000516989 MMP24-AS1A0A0U1RRL7 71 aa3.04□□□□□ -1.92
SCARNA6.1-201ENST00000516989 NDUFS5O43920 106 aa3.04□□□□□ -1.92
SCARNA6.1-201ENST00000516989 WFDC13Q8IUB5 93 aa3.04□□□□□ -1.92
SCARNA6.1-201ENST00000516989 TMEM254Q8TBM7 123 aa3.04□□□□□ -1.92
SCARNA6.1-201ENST00000516989 MRPL34Q9BQ48 92 aaKnown RBP3.04□□□□□ -1.92
SCARNA6.1-201ENST00000516989 J3QR89 54 aa3.03□□□□□ -1.92
SCARNA6.1-201ENST00000516989 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
SCARNA6.1-201ENST00000516989 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
SCARNA6.1-201ENST00000516989 HCG22E2RYF7 251 aa3.01□□□□□ -1.93
SCARNA6.1-201ENST00000516989 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
SCARNA6.1-201ENST00000516989 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
SCARNA6.1-201ENST00000516989 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
SCARNA6.1-201ENST00000516989 LINC00643Q86TS7 51 aa2.99□□□□□ -1.93
SCARNA6.1-201ENST00000516989 SPINK7P58062 85 aa2.98□□□□□ -1.93
SCARNA6.1-201ENST00000516989 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
SCARNA6.1-201ENST00000516989 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
SCARNA6.1-201ENST00000516989 Q5W150 140 aa2.97□□□□□ -1.93
SCARNA6.1-201ENST00000516989 K7ERU9 68 aa2.96□□□□□ -1.94
SCARNA6.1-201ENST00000516989 RBM12B-AS1Q9P1G2 102 aa2.96□□□□□ -1.94
SCARNA6.1-201ENST00000516989 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
SCARNA6.1-201ENST00000516989 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
SCARNA6.1-201ENST00000516989 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms