RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 NSD1Q96L73 2696 aaPredicted RBP3.01□□□□□ -1.93
LINC00616-205ENST00000514600 MRPL33O75394 65 aaKnown RBP3.01□□□□□ -1.93
LINC00616-205ENST00000514600 PRB3Q04118 309 aaPredicted RBP2.99□□□□□ -1.93
LINC00616-205ENST00000514600 ATRQ13535 2644 aa2.99□□□□□ -1.93
LINC00616-205ENST00000514600 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
LINC00616-205ENST00000514600 CUBNO60494 3623 aa2.98□□□□□ -1.93
LINC00616-205ENST00000514600 HRNRQ86YZ3 2850 aaPredicted RBP2.97□□□□□ -1.93
LINC00616-205ENST00000514600 HIVEP2P31629 2446 aa2.97□□□□□ -1.93
LINC00616-205ENST00000514600 MT3P25713 68 aa2.97□□□□□ -1.93
LINC00616-205ENST00000514600 RPL37P61927 97 aaKnown RBP2.97□□□□□ -1.93
LINC00616-205ENST00000514600 LINC00308Q8TCZ7 52 aa2.97□□□□□ -1.93
LINC00616-205ENST00000514600 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.93
LINC00616-205ENST00000514600 TLN2Q9Y4G6 2542 aa2.96□□□□□ -1.94
LINC00616-205ENST00000514600 Q8IZM0 81 aa2.95□□□□□ -1.94
LINC00616-205ENST00000514600 ZANQ9Y493 2812 aa2.95□□□□□ -1.94
LINC00616-205ENST00000514600 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
LINC00616-205ENST00000514600 SPINK13Q1W4C9 94 aa2.95□□□□□ -1.94
LINC00616-205ENST00000514600 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
LINC00616-205ENST00000514600 UNQ6190/PRO20217Q6UXQ8 127 aa2.95□□□□□ -1.94
LINC00616-205ENST00000514600 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
LINC00616-205ENST00000514600 PIGYQ3MUY2 71 aa2.94□□□□□ -1.94
LINC00616-205ENST00000514600 UBE2DNLQ8IWF7 75 aa2.94□□□□□ -1.94
LINC00616-205ENST00000514600 SONP18583 2426 aaKnown RBP2.94□□□□□ -1.94
LINC00616-205ENST00000514600 ANK2Q01484 3957 aa2.93□□□□□ -1.94
LINC00616-205ENST00000514600 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
LINC00616-205ENST00000514600 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
LINC00616-205ENST00000514600 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
LINC00616-205ENST00000514600 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
LINC00616-205ENST00000514600 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
LINC00616-205ENST00000514600 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
LINC00616-205ENST00000514600 IAPPP10997 89 aa2.9□□□□□ -1.95
LINC00616-205ENST00000514600 MEGF8Q7Z7M0 2845 aa2.9□□□□□ -1.95
LINC00616-205ENST00000514600 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
LINC00616-205ENST00000514600 TGP01266 2768 aa2.88□□□□□ -1.95
LINC00616-205ENST00000514600 NDUFA1O15239 70 aa2.88□□□□□ -1.95
LINC00616-205ENST00000514600 CNFNQ9BYD5 112 aa2.88□□□□□ -1.95
LINC00616-205ENST00000514600 USF3Q68DE3 2245 aa2.88□□□□□ -1.95
LINC00616-205ENST00000514600 KRTAP10-3P60369 221 aa2.86□□□□□ -1.95
LINC00616-205ENST00000514600 DEFB108AA8MXU0 73 aa2.86□□□□□ -1.95
LINC00616-205ENST00000514600 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
LINC00616-205ENST00000514600 PKD1L1Q8TDX9 2849 aa2.86□□□□□ -1.95
LINC00616-205ENST00000514600 ROS1P08922 2347 aa2.85□□□□□ -1.95
LINC00616-205ENST00000514600 I3L2K1 104 aa2.85□□□□□ -1.95
LINC00616-205ENST00000514600 MGAM2Q2M2H8 2515 aa2.84□□□□□ -1.95
LINC00616-205ENST00000514600 K7EQZ3 153 aa2.84□□□□□ -1.95
LINC00616-205ENST00000514600 TENM1Q9UKZ4 2725 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 PLCE1Q9P212 2302 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 A0A1B0GVY2 172 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 LYNX1G3V0Z9 82 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 H0YAA0 97 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 LYNX1P0DP58 116 aa2.83□□□□□ -1.96
LINC00616-205ENST00000514600 TRRAPQ9Y4A5 3859 aa2.82□□□□□ -1.96
LINC00616-205ENST00000514600 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
LINC00616-205ENST00000514600 NOTCH1P46531 2555 aa2.82□□□□□ -1.96
LINC00616-205ENST00000514600 PRKDCP78527 4128 aaKnown RBP2.82□□□□□ -1.96
LINC00616-205ENST00000514600 NBEAL2Q6ZNJ1 2754 aa2.81□□□□□ -1.96
LINC00616-205ENST00000514600 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
LINC00616-205ENST00000514600 TP53AIP1Q9HCN2 124 aa2.81□□□□□ -1.96
LINC00616-205ENST00000514600 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
LINC00616-205ENST00000514600 SPINK9Q5DT21 86 aa2.81□□□□□ -1.96
LINC00616-205ENST00000514600 RYR3Q15413 4870 aa2.81□□□□□ -1.96
LINC00616-205ENST00000514600 PRCDQ00LT1 54 aa2.8□□□□□ -1.96
LINC00616-205ENST00000514600 MINOS1Q5TGZ0 78 aa2.8□□□□□ -1.96
LINC00616-205ENST00000514600 PCOTHQ58A44 107 aa2.79□□□□□ -1.96
LINC00616-205ENST00000514600 RPL39P5Q59GN2 51 aa2.79□□□□□ -1.96
LINC00616-205ENST00000514600 LELP1Q5T871 98 aa2.79□□□□□ -1.96
LINC00616-205ENST00000514600 BRD3OSQ6XYD6 125 aa2.79□□□□□ -1.96
LINC00616-205ENST00000514600 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
LINC00616-205ENST00000514600 VWFP04275 2813 aa2.77□□□□□ -1.97
LINC00616-205ENST00000514600 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 TMEM167AQ8TBQ9 72 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 USMG5Q96IX5 58 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 WNK1Q9H4A3 2382 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 CMYA5Q8N3K9 4069 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
LINC00616-205ENST00000514600 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
LINC00616-205ENST00000514600 COX6A2Q02221 97 aa2.75□□□□□ -1.97
LINC00616-205ENST00000514600 WT1-ASQ06250 92 aa2.75□□□□□ -1.97
LINC00616-205ENST00000514600 LEAP2Q969E1 77 aa2.75□□□□□ -1.97
LINC00616-205ENST00000514600 K7EIL1 84 aa2.73□□□□□ -1.97
LINC00616-205ENST00000514600 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
LINC00616-205ENST00000514600 KAAG1Q9UBP8 84 aa2.72□□□□□ -1.97
LINC00616-205ENST00000514600 EPPK1P58107 5090 aaKnown RBP2.72□□□□□ -1.97
LINC00616-205ENST00000514600 WNK2Q9Y3S1 2297 aa2.72□□□□□ -1.97
LINC00616-205ENST00000514600 Q6ZSA8 131 aa2.71□□□□□ -1.98
LINC00616-205ENST00000514600 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
LINC00616-205ENST00000514600 DEFB108BQ8NET1 73 aa2.71□□□□□ -1.98
LINC00616-205ENST00000514600 NOTCH3Q9UM47 2321 aa2.7□□□□□ -1.98
LINC00616-205ENST00000514600 K7EIM0 57 aa2.69□□□□□ -1.98
LINC00616-205ENST00000514600 KLK9Q2XQG4 91 aa2.69□□□□□ -1.98
LINC00616-205ENST00000514600 KRTAP13-3Q3SY46 172 aa2.69□□□□□ -1.98
LINC00616-205ENST00000514600 WFDC13Q8IUB5 93 aa2.69□□□□□ -1.98
LINC00616-205ENST00000514600 RYR2Q92736 4967 aa2.68□□□□□ -1.98
LINC00616-205ENST00000514600 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
LINC00616-205ENST00000514600 WFDC10BQ8IUB3 73 aa2.66□□□□□ -1.98
LINC00616-205ENST00000514600 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
LINC00616-205ENST00000514600 COL7A1Q02388 2944 aa2.65□□□□□ -1.98
LINC00616-205ENST00000514600 APELAP0DMC3 54 aa2.65□□□□□ -1.99
LINC00616-205ENST00000514600 POLR2KP53803 58 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 254.3 ms