RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 KRTAP29-1A8MX34 341 aaPredicted RBP7.65□□□□□ -1.18
SDHA-216ENST00000514027 RTL8CO15255 209 aa7.65□□□□□ -1.18
SDHA-216ENST00000514027 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
SDHA-216ENST00000514027 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
SDHA-216ENST00000514027 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
SDHA-216ENST00000514027 A8MWP4 228 aa7.62□□□□□ -1.19
SDHA-216ENST00000514027 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
SDHA-216ENST00000514027 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
SDHA-216ENST00000514027 PSORS1C2Q9UIG4 136 aa7.6□□□□□ -1.19
SDHA-216ENST00000514027 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
SDHA-216ENST00000514027 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
SDHA-216ENST00000514027 VPS13DQ5THJ4 4388 aa7.57□□□□□ -1.2
SDHA-216ENST00000514027 Q6ZR54 194 aa7.57□□□□□ -1.2
SDHA-216ENST00000514027 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
SDHA-216ENST00000514027 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
SDHA-216ENST00000514027 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
SDHA-216ENST00000514027 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
SDHA-216ENST00000514027 SEC61BP60468 96 aaKnown RBP7.55□□□□□ -1.2
SDHA-216ENST00000514027 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
SDHA-216ENST00000514027 HECTD4Q9Y4D8 3996 aa7.54□□□□□ -1.2
SDHA-216ENST00000514027 MMP24-AS1A0A0U1RRL7 71 aa7.54□□□□□ -1.2
SDHA-216ENST00000514027 LY6G6CO95867 125 aa7.54□□□□□ -1.2
SDHA-216ENST00000514027 TGP01266 2768 aa7.53□□□□□ -1.2
SDHA-216ENST00000514027 ASB16-AS1Q495Z4 193 aa7.53□□□□□ -1.2
SDHA-216ENST00000514027 WWC2-AS2Q96NR7 200 aa7.53□□□□□ -1.2
SDHA-216ENST00000514027 ZNF861PO60384 105 aa7.52□□□□□ -1.2
SDHA-216ENST00000514027 Q96NJ1 140 aa7.52□□□□□ -1.2
SDHA-216ENST00000514027 PCOTHQ58A44 107 aa7.52□□□□□ -1.21
SDHA-216ENST00000514027 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
SDHA-216ENST00000514027 FRAS1Q86XX4 4008 aa7.5□□□□□ -1.21
SDHA-216ENST00000514027 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
SDHA-216ENST00000514027 IGHV6-1A0A0B4J1U7 121 aa7.49□□□□□ -1.21
SDHA-216ENST00000514027 HRES1P13985 223 aa7.48□□□□□ -1.21
SDHA-216ENST00000514027 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
SDHA-216ENST00000514027 C8orf17Q9NRJ1 99 aa7.46□□□□□ -1.22
SDHA-216ENST00000514027 A0A087X002 238 aa7.46□□□□□ -1.22
SDHA-216ENST00000514027 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
SDHA-216ENST00000514027 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
SDHA-216ENST00000514027 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
SDHA-216ENST00000514027 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
SDHA-216ENST00000514027 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
SDHA-216ENST00000514027 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
SDHA-216ENST00000514027 RETNLBQ9BQ08 111 aa7.43□□□□□ -1.22
SDHA-216ENST00000514027 KRTAP10-2P60368 255 aa7.42□□□□□ -1.22
SDHA-216ENST00000514027 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.23
SDHA-216ENST00000514027 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.23
SDHA-216ENST00000514027 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
SDHA-216ENST00000514027 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
SDHA-216ENST00000514027 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
SDHA-216ENST00000514027 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
SDHA-216ENST00000514027 KRTAP10-1P60331 282 aa7.31□□□□□ -1.24
SDHA-216ENST00000514027 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
SDHA-216ENST00000514027 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
SDHA-216ENST00000514027 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
SDHA-216ENST00000514027 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
SDHA-216ENST00000514027 A0A1B0GU69 56 aa7.27□□□□□ -1.25
SDHA-216ENST00000514027 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
SDHA-216ENST00000514027 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
SDHA-216ENST00000514027 Q6ZSA8 131 aa7.26□□□□□ -1.25
SDHA-216ENST00000514027 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
SDHA-216ENST00000514027 Q5W150 140 aa7.25□□□□□ -1.25
SDHA-216ENST00000514027 ACYP2P14621 99 aa7.23□□□□□ -1.25
SDHA-216ENST00000514027 PKD1P98161 4303 aa7.22□□□□□ -1.25
SDHA-216ENST00000514027 HYDINQ4G0P3 5121 aa7.22□□□□□ -1.25
SDHA-216ENST00000514027 UQCR11O14957 56 aa7.21□□□□□ -1.25
SDHA-216ENST00000514027 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
SDHA-216ENST00000514027 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
SDHA-216ENST00000514027 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
SDHA-216ENST00000514027 ROMO1P60602 79 aa7.17□□□□□ -1.26
SDHA-216ENST00000514027 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
SDHA-216ENST00000514027 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
SDHA-216ENST00000514027 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
SDHA-216ENST00000514027 SACSQ9NZJ4 4579 aa7.12□□□□□ -1.27
SDHA-216ENST00000514027 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
SDHA-216ENST00000514027 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
SDHA-216ENST00000514027 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
SDHA-216ENST00000514027 IGKV2-30P06310 120 aa7.07□□□□□ -1.28
SDHA-216ENST00000514027 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
SDHA-216ENST00000514027 SPINK1P00995 79 aa7.05□□□□□ -1.28
SDHA-216ENST00000514027 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
SDHA-216ENST00000514027 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
SDHA-216ENST00000514027 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
SDHA-216ENST00000514027 A8MUU9 505 aa6.99□□□□□ -1.29
SDHA-216ENST00000514027 P0C880 135 aa6.99□□□□□ -1.29
SDHA-216ENST00000514027 RYR2Q92736 4967 aa6.94□□□□□ -1.3
SDHA-216ENST00000514027 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
SDHA-216ENST00000514027 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
SDHA-216ENST00000514027 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
SDHA-216ENST00000514027 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
SDHA-216ENST00000514027 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.3
SDHA-216ENST00000514027 H0YAA0 97 aa6.87□□□□□ -1.31
SDHA-216ENST00000514027 Q8N1X5 172 aa6.87□□□□□ -1.31
SDHA-216ENST00000514027 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
SDHA-216ENST00000514027 FAT1Q14517 4588 aa6.85□□□□□ -1.31
SDHA-216ENST00000514027 APOBP04114 4563 aaKnown RBP6.82□□□□□ -1.32
SDHA-216ENST00000514027 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
SDHA-216ENST00000514027 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
SDHA-216ENST00000514027 RYR3Q15413 4870 aa6.76□□□□□ -1.33
SDHA-216ENST00000514027 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
SDHA-216ENST00000514027 LUZP6Q538Z0 58 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms