RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 REV3LO60673 3130 aa1.52□□□□□ -2.17
NIPBL-207ENST00000513819 AKAP13Q12802 2813 aa1.52□□□□□ -2.17
NIPBL-207ENST00000513819 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
NIPBL-207ENST00000513819 TRIOO75962 3097 aa1.51□□□□□ -2.17
NIPBL-207ENST00000513819 BOD1L1Q8NFC6 3051 aa1.51□□□□□ -2.17
NIPBL-207ENST00000513819 NCOR1O75376 2440 aa1.51□□□□□ -2.17
NIPBL-207ENST00000513819 NCOR2Q9Y618 2525 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 CREBBPQ92793 2442 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 F8P00451 2351 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 DNAH11Q96DT5 4516 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 AKAP9Q99996 3911 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 NBPF19A0A087WUL8 3843 aa1.5□□□□□ -2.17
NIPBL-207ENST00000513819 UNC80Q8N2C7 3258 aa1.49□□□□□ -2.17
NIPBL-207ENST00000513819 TRANK1O15050 2925 aa1.49□□□□□ -2.17
NIPBL-207ENST00000513819 DEFB4AO15263 64 aa1.49□□□□□ -2.17
NIPBL-207ENST00000513819 WDFY4Q6ZS81 3184 aa1.49□□□□□ -2.17
NIPBL-207ENST00000513819 LRBAP50851 2863 aa1.48□□□□□ -2.17
NIPBL-207ENST00000513819 FRYQ5TBA9 3013 aa1.48□□□□□ -2.17
NIPBL-207ENST00000513819 LAMA2P24043 3122 aaKnown RBP1.48□□□□□ -2.17
NIPBL-207ENST00000513819 VWFP04275 2813 aa1.48□□□□□ -2.17
NIPBL-207ENST00000513819 ITPR1Q14643 2758 aa1.47□□□□□ -2.17
NIPBL-207ENST00000513819 ABCA2Q9BZC7 2435 aa1.47□□□□□ -2.17
NIPBL-207ENST00000513819 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
NIPBL-207ENST00000513819 HIVEP3Q5T1R4 2406 aa1.47□□□□□ -2.17
NIPBL-207ENST00000513819 SPTBN5Q9NRC6 3674 aaKnown RBP1.46□□□□□ -2.18
NIPBL-207ENST00000513819 CRYBG3Q68DQ2 2970 aa1.46□□□□□ -2.18
NIPBL-207ENST00000513819 PRRC2CQ9Y520 2896 aaKnown RBP1.46□□□□□ -2.18
NIPBL-207ENST00000513819 CCDC168Q8NDH2 2452 aa1.46□□□□□ -2.18
NIPBL-207ENST00000513819 SPG11Q96JI7 2443 aa1.46□□□□□ -2.18
NIPBL-207ENST00000513819 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
NIPBL-207ENST00000513819 HTTP42858 3142 aa1.45□□□□□ -2.18
NIPBL-207ENST00000513819 DCHS1Q96JQ0 3298 aa1.45□□□□□ -2.18
NIPBL-207ENST00000513819 DMBT1Q9UGM3 2413 aaPredicted RBP1.45□□□□□ -2.18
NIPBL-207ENST00000513819 C5orf42Q9H799 3197 aa1.44□□□□□ -2.18
NIPBL-207ENST00000513819 CELSR1Q9NYQ6 3014 aa1.44□□□□□ -2.18
NIPBL-207ENST00000513819 RPS29P62273 56 aaKnown RBP1.44□□□□□ -2.18
NIPBL-207ENST00000513819 KRTAP21-3Q3LHN1 58 aa1.44□□□□□ -2.18
NIPBL-207ENST00000513819 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
NIPBL-207ENST00000513819 EP400Q96L91 3159 aa1.44□□□□□ -2.18
NIPBL-207ENST00000513819 TACC2O95359 2948 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 SPEGQ15772 3267 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 LAMA1P25391 3075 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 ZFHX4Q86UP3 3567 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 TNP1P09430 55 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 DMXL1Q9Y485 3027 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 COL6A5A8TX70 2615 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 CHD9Q3L8U1 2897 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 RIF1Q5UIP0 2472 aaKnown RBP1.43□□□□□ -2.18
NIPBL-207ENST00000513819 PKD1L2Q7Z442 2459 aa1.43□□□□□ -2.18
NIPBL-207ENST00000513819 XIRP2A4UGR9 3374 aa1.42□□□□□ -2.18
NIPBL-207ENST00000513819 ANKHD1Q8IWZ3 2542 aaKnown RBP1.42□□□□□ -2.18
NIPBL-207ENST00000513819 NBASA2RRP1 2371 aa1.42□□□□□ -2.18
NIPBL-207ENST00000513819 COL12A1Q99715 3063 aa1.42□□□□□ -2.18
NIPBL-207ENST00000513819 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
NIPBL-207ENST00000513819 ATMQ13315 3056 aa1.42□□□□□ -2.18
NIPBL-207ENST00000513819 USP34Q70CQ2 3546 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 DNAH1Q9P2D7 4330 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 DMXL2Q8TDJ6 3036 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 DMDP11532 3685 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 MEGF8Q7Z7M0 2845 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 CEP290O15078 2479 aa1.41□□□□□ -2.18
NIPBL-207ENST00000513819 SMR3AQ99954 134 aa1.4□□□□□ -2.19
NIPBL-207ENST00000513819 APCP25054 2843 aa1.4□□□□□ -2.19
NIPBL-207ENST00000513819 FREM2Q5SZK8 3169 aa1.4□□□□□ -2.19
NIPBL-207ENST00000513819 UTP20O75691 2785 aaKnown RBP1.39□□□□□ -2.19
NIPBL-207ENST00000513819 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
NIPBL-207ENST00000513819 SETD2Q9BYW2 2564 aaPredicted RBP1.39□□□□□ -2.19
NIPBL-207ENST00000513819 DNAH8Q96JB1 4490 aa1.38□□□□□ -2.19
NIPBL-207ENST00000513819 TLN1Q9Y490 2541 aaKnown RBP1.38□□□□□ -2.19
NIPBL-207ENST00000513819 LOC400499M0QZD8 3231 aa1.38□□□□□ -2.19
NIPBL-207ENST00000513819 TEX15Q9BXT5 2789 aa1.38□□□□□ -2.19
NIPBL-207ENST00000513819 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
NIPBL-207ENST00000513819 TTC28Q96AY4 2481 aa1.38□□□□□ -2.19
NIPBL-207ENST00000513819 NF1P21359 2839 aa1.37□□□□□ -2.19
NIPBL-207ENST00000513819 CENPEQ02224 2701 aa1.36□□□□□ -2.19
NIPBL-207ENST00000513819 CELSR3Q9NYQ7 3312 aa1.36□□□□□ -2.19
NIPBL-207ENST00000513819 USP9XQ93008 2570 aaPredicted RBP1.36□□□□□ -2.19
NIPBL-207ENST00000513819 SONP18583 2426 aaKnown RBP1.36□□□□□ -2.19
NIPBL-207ENST00000513819 SPTAN1Q13813 2472 aaKnown RBP1.35□□□□□ -2.19
NIPBL-207ENST00000513819 RELNP78509 3460 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 TLN2Q9Y4G6 2542 aa1.35□□□□□ -2.19
NIPBL-207ENST00000513819 DNAH14Q0VDD8 3507 aa1.34□□□□□ -2.19
NIPBL-207ENST00000513819 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.19
NIPBL-207ENST00000513819 LAMA3Q16787 3333 aa1.34□□□□□ -2.2
NIPBL-207ENST00000513819 DCHS2Q6V1P9 2916 aa1.34□□□□□ -2.2
NIPBL-207ENST00000513819 ABCA12Q86UK0 2595 aa1.34□□□□□ -2.2
NIPBL-207ENST00000513819 FRAS1Q86XX4 4008 aa1.34□□□□□ -2.2
NIPBL-207ENST00000513819 HELZ2Q9BYK8 2649 aaKnown RBP1.34□□□□□ -2.2
NIPBL-207ENST00000513819 WDFY3Q8IZQ1 3526 aa1.33□□□□□ -2.2
NIPBL-207ENST00000513819 ITPR3Q14573 2671 aa1.33□□□□□ -2.2
NIPBL-207ENST00000513819 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
NIPBL-207ENST00000513819 DOPEY1Q5JWR5 2465 aa1.33□□□□□ -2.2
NIPBL-207ENST00000513819 DNAH10Q8IVF4 4471 aa1.32□□□□□ -2.2
NIPBL-207ENST00000513819 SACSQ9NZJ4 4579 aa1.32□□□□□ -2.2
NIPBL-207ENST00000513819 LAMA5O15230 3695 aa1.32□□□□□ -2.2
NIPBL-207ENST00000513819 ANK3Q12955 4377 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms