RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 C6orf48Q9UBA6 75 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 NBASA2RRP1 2371 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 STAB2Q8WWQ8 2551 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 AKAP13Q12802 2813 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
RNF4-219ENST00000513450 EP300Q09472 2414 aaPredicted RBP0.21□□□□□ -2.38
RNF4-219ENST00000513450 TNRC18O15417 2968 aaPredicted RBP0.2□□□□□ -2.38
RNF4-219ENST00000513450 GCN1Q92616 2671 aaKnown RBP0.2□□□□□ -2.38
RNF4-219ENST00000513450 SERF2P84101 59 aa0.2□□□□□ -2.38
RNF4-219ENST00000513450 WT1-ASQ06250 92 aa0.2□□□□□ -2.38
RNF4-219ENST00000513450 S4R3F8 94 aa0.2□□□□□ -2.38
RNF4-219ENST00000513450 RYR2Q92736 4967 aa0.2□□□□□ -2.38
RNF4-219ENST00000513450 SPENQ96T58 3664 aaKnown RBP0.2□□□□□ -2.38
RNF4-219ENST00000513450 UTP20O75691 2785 aaKnown RBP0.2□□□□□ -2.38
RNF4-219ENST00000513450 SACSQ9NZJ4 4579 aa0.2□□□□□ -2.38
RNF4-219ENST00000513450 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 MXRA5Q9NR99 2828 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 HSPG2P98160 4391 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 FLNCQ14315 2725 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 CFAP46Q8IYW2 2715 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 PRRC2CQ9Y520 2896 aaKnown RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 M0R2T5 61 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 PLNP26678 52 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 TFF3Q07654 80 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 DEFB135Q30KP9 77 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 CMC2Q9NRP2 79 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 PDZD2O15018 2839 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 KMT2CQ8NEZ4 4911 aaKnown RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 USP9YO00507 2555 aaPredicted RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 HRNRQ86YZ3 2850 aaPredicted RBP0.19□□□□□ -2.38
RNF4-219ENST00000513450 ABCC8Q09428 1581 aa0.19□□□□□ -2.38
RNF4-219ENST00000513450 KALRNO60229 2985 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 IQGAP1P46940 1657 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 SMIM27A0A1W2PRY6 76 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 LINC01546A6NGU7 62 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 H0YGX0 51 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 ACANP16112 2415 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 DNAH11Q96DT5 4516 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 MGAM2Q2M2H8 2515 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 APC2O95996 2303 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 LMO7Q8WWI1 1683 aa0.18□□□□□ -2.38
RNF4-219ENST00000513450 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 RNF213Q63HN8 5207 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 ACACBO00763 2458 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 PRLHP81277 87 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 DEFB106AQ8N104 65 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 TMEM167BQ9NRX6 74 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 TIMM8BQ9Y5J9 83 aaPredicted RBP0.17□□□□□ -2.38
RNF4-219ENST00000513450 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 RYR3Q15413 4870 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 NFAT5O94916 1531 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 HYDINQ4G0P3 5121 aa0.17□□□□□ -2.38
RNF4-219ENST00000513450 CEP290O15078 2479 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 LRP1BQ9NZR2 4599 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 DNAH3Q8TD57 4116 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 DDX60Q8IY21 1712 aaKnown RBP0.16□□□□□ -2.38
RNF4-219ENST00000513450 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 HERC1Q15751 4861 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 TLN1Q9Y490 2541 aaKnown RBP0.16□□□□□ -2.38
RNF4-219ENST00000513450 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 SPRR2DP22532 72 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 KRTAP20-1Q3LI63 56 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 ABRACLQ9P1F3 81 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 PKHD1L1Q86WI1 4243 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 PKD1P98161 4303 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 MAP1AP78559 2803 aaPredicted RBP0.16□□□□□ -2.38
RNF4-219ENST00000513450 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 MTORP42345 2549 aa0.16□□□□□ -2.38
RNF4-219ENST00000513450 EPPK1P58107 5090 aaKnown RBP0.16□□□□□ -2.38
RNF4-219ENST00000513450 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.38
RNF4-219ENST00000513450 TGP01266 2768 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 CEP295Q9C0D2 2601 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 SPTAN1Q13813 2472 aaKnown RBP0.15□□□□□ -2.39
RNF4-219ENST00000513450 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 APOBP04114 4563 aaKnown RBP0.15□□□□□ -2.39
RNF4-219ENST00000513450 BIRC6Q9NR09 4857 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 CELSR3Q9NYQ7 3312 aa0.15□□□□□ -2.39
RNF4-219ENST00000513450 TEX15Q9BXT5 2789 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 SPTBN5Q9NRC6 3674 aaKnown RBP0.14□□□□□ -2.39
RNF4-219ENST00000513450 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 TOMM5Q8N4H5 51 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 KAAG1Q9UBP8 84 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 PKHD1P08F94 4074 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 NBPF19A0A087WUL8 3843 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 DNHD1Q96M86 4753 aa0.14□□□□□ -2.39
RNF4-219ENST00000513450 NIPBLQ6KC79 2804 aaeCLIP0.14□□□□□ -2.39
RNF4-219ENST00000513450 ANK3Q12955 4377 aaKnown RBP0.13□□□□□ -2.39
RNF4-219ENST00000513450 FAT3Q8TDW7 4589 aa0.13□□□□□ -2.39
RNF4-219ENST00000513450 KIF21BO75037 1637 aa0.13□□□□□ -2.39
RNF4-219ENST00000513450 DCHS2Q6V1P9 2916 aa0.13□□□□□ -2.39
RNF4-219ENST00000513450 WFDC10BQ8IUB3 73 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms