RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CEP250Q9BV73 2442 aa1.99□□□□□ -2.09
CHD1-208ENST00000512392 ATMQ13315 3056 aa1.98□□□□□ -2.09
CHD1-208ENST00000512392 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
CHD1-208ENST00000512392 MGAQ8IWI9 3026 aa1.98□□□□□ -2.09
CHD1-208ENST00000512392 DMXL2Q8TDJ6 3036 aa1.98□□□□□ -2.09
CHD1-208ENST00000512392 U3KQA8 63 aa1.97□□□□□ -2.09
CHD1-208ENST00000512392 AKAP13Q12802 2813 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 MAP1BP46821 2468 aaKnown RBP1.96□□□□□ -2.1
CHD1-208ENST00000512392 CSPG4Q6UVK1 2322 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 KALRNO60229 2985 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 ADGRG4Q8IZF6 3080 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 H3BUA1 57 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 DCHS2Q6V1P9 2916 aa1.96□□□□□ -2.1
CHD1-208ENST00000512392 EP300Q09472 2414 aaPredicted RBP1.95□□□□□ -2.1
CHD1-208ENST00000512392 ANKRD11Q6UB99 2663 aaPredicted RBP1.95□□□□□ -2.1
CHD1-208ENST00000512392 TACC2O95359 2948 aa1.95□□□□□ -2.1
CHD1-208ENST00000512392 PIEZO1Q92508 2521 aa1.95□□□□□ -2.1
CHD1-208ENST00000512392 CSMD1Q96PZ7 3565 aa1.94□□□□□ -2.1
CHD1-208ENST00000512392 ACACAQ13085 2346 aa1.94□□□□□ -2.1
CHD1-208ENST00000512392 LRBAP50851 2863 aa1.93□□□□□ -2.1
CHD1-208ENST00000512392 LEAP2Q969E1 77 aa1.93□□□□□ -2.1
CHD1-208ENST00000512392 ZZEF1O43149 2961 aa1.93□□□□□ -2.1
CHD1-208ENST00000512392 RELNP78509 3460 aa1.93□□□□□ -2.1
CHD1-208ENST00000512392 APC2O95996 2303 aa1.92□□□□□ -2.1
CHD1-208ENST00000512392 RIF1Q5UIP0 2472 aaKnown RBP1.92□□□□□ -2.1
CHD1-208ENST00000512392 HRNRQ86YZ3 2850 aaPredicted RBP1.92□□□□□ -2.1
CHD1-208ENST00000512392 DEFB131AP59861 70 aa1.92□□□□□ -2.1
CHD1-208ENST00000512392 NBASA2RRP1 2371 aa1.91□□□□□ -2.1
CHD1-208ENST00000512392 CEP295Q9C0D2 2601 aa1.91□□□□□ -2.1
CHD1-208ENST00000512392 TLN1Q9Y490 2541 aaKnown RBP1.9□□□□□ -2.1
CHD1-208ENST00000512392 CELSR1Q9NYQ6 3014 aa1.9□□□□□ -2.1
CHD1-208ENST00000512392 DEFB109BQ30KR1 87 aa1.89□□□□□ -2.11
CHD1-208ENST00000512392 KRTAP21-3Q3LHN1 58 aa1.89□□□□□ -2.11
CHD1-208ENST00000512392 ATRQ13535 2644 aa1.89□□□□□ -2.11
CHD1-208ENST00000512392 AKAP6Q13023 2319 aa1.89□□□□□ -2.11
CHD1-208ENST00000512392 SVEP1Q4LDE5 3571 aa1.89□□□□□ -2.11
CHD1-208ENST00000512392 SPTA1P02549 2419 aa1.88□□□□□ -2.11
CHD1-208ENST00000512392 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
CHD1-208ENST00000512392 ANKHD1Q8IWZ3 2542 aaKnown RBP1.87□□□□□ -2.11
CHD1-208ENST00000512392 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
CHD1-208ENST00000512392 SPTBN4Q9H254 2564 aa1.87□□□□□ -2.11
CHD1-208ENST00000512392 VPS13CQ709C8 3753 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 HECTD1Q9ULT8 2610 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 CHD6Q8TD26 2715 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 A8MTW9 85 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 DEFB108AA8MXU0 73 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 CRYBG3Q68DQ2 2970 aa1.86□□□□□ -2.11
CHD1-208ENST00000512392 NCOR2Q9Y618 2525 aa1.85□□□□□ -2.11
CHD1-208ENST00000512392 CHD8Q9HCK8 2581 aa1.85□□□□□ -2.11
CHD1-208ENST00000512392 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
CHD1-208ENST00000512392 SPINK1P00995 79 aa1.85□□□□□ -2.11
CHD1-208ENST00000512392 RPL39P5Q59GN2 51 aa1.85□□□□□ -2.11
CHD1-208ENST00000512392 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 DEFB124Q8NES8 71 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 ITPR1Q14643 2758 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 ANK2Q01484 3957 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 SPTAN1Q13813 2472 aaKnown RBP1.83□□□□□ -2.12
CHD1-208ENST00000512392 CSMD2Q7Z408 3487 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 UTP20O75691 2785 aaKnown RBP1.83□□□□□ -2.12
CHD1-208ENST00000512392 CLPSL2Q6UWE3 100 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 DEFB108BQ8NET1 73 aa1.83□□□□□ -2.12
CHD1-208ENST00000512392 ZANQ9Y493 2812 aa1.82□□□□□ -2.12
CHD1-208ENST00000512392 FLNCQ14315 2725 aa1.81□□□□□ -2.12
CHD1-208ENST00000512392 APELAP0DMC3 54 aa1.81□□□□□ -2.12
CHD1-208ENST00000512392 CFAP46Q8IYW2 2715 aa1.8□□□□□ -2.12
CHD1-208ENST00000512392 SPG11Q96JI7 2443 aa1.8□□□□□ -2.12
CHD1-208ENST00000512392 PRCDQ00LT1 54 aa1.8□□□□□ -2.12
CHD1-208ENST00000512392 CUBNO60494 3623 aa1.8□□□□□ -2.12
CHD1-208ENST00000512392 CENPEQ02224 2701 aa1.8□□□□□ -2.12
CHD1-208ENST00000512392 PKD1L2Q7Z442 2459 aa1.79□□□□□ -2.12
CHD1-208ENST00000512392 USP9XQ93008 2570 aaPredicted RBP1.79□□□□□ -2.12
CHD1-208ENST00000512392 AKAP9Q99996 3911 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 WNK1Q9H4A3 2382 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 VWFP04275 2813 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 ZFYVE26Q68DK2 2539 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 MYO18BQ8IUG5 2567 aa1.78□□□□□ -2.12
CHD1-208ENST00000512392 TLN2Q9Y4G6 2542 aa1.78□□□□□ -2.13
CHD1-208ENST00000512392 TMEM167AQ8TBQ9 72 aa1.78□□□□□ -2.13
CHD1-208ENST00000512392 MXRA5Q9NR99 2828 aa1.77□□□□□ -2.13
CHD1-208ENST00000512392 TENM4Q6N022 2769 aa1.77□□□□□ -2.13
CHD1-208ENST00000512392 LRRK2Q5S007 2527 aa1.77□□□□□ -2.13
CHD1-208ENST00000512392 ZNF469Q96JG9 3925 aaPredicted RBP1.77□□□□□ -2.13
CHD1-208ENST00000512392 SRRM2Q9UQ35 2752 aaKnown RBP1.77□□□□□ -2.13
CHD1-208ENST00000512392 USP9YO00507 2555 aaPredicted RBP1.77□□□□□ -2.13
CHD1-208ENST00000512392 FBN2P35556 2912 aa1.76□□□□□ -2.13
CHD1-208ENST00000512392 OTOGQ6ZRI0 2925 aa1.76□□□□□ -2.13
CHD1-208ENST00000512392 MYO9AB2RTY4 2548 aa1.76□□□□□ -2.13
CHD1-208ENST00000512392 K7EIM0 57 aa1.76□□□□□ -2.13
CHD1-208ENST00000512392 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CHD1-208ENST00000512392 CACNA1AO00555 2505 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 DOPEY1Q5JWR5 2465 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 USP24Q9UPU5 2620 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 M0QY20 66 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 ACACBO00763 2458 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 SETD2Q9BYW2 2564 aaPredicted RBP1.75□□□□□ -2.13
CHD1-208ENST00000512392 NF1P21359 2839 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 SONP18583 2426 aaKnown RBP1.75□□□□□ -2.13
CHD1-208ENST00000512392 NBPF19A0A087WUL8 3843 aa1.75□□□□□ -2.13
CHD1-208ENST00000512392 TEX15Q9BXT5 2789 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms