RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
SNF8-211ENST00000512243 RBM3P98179 157 aaKnown RBP5.39□□□□□ -1.55
SNF8-211ENST00000512243 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
SNF8-211ENST00000512243 JMJD7-PLA2G4BH0Y9G9 81 aa5.38□□□□□ -1.55
SNF8-211ENST00000512243 DSCR8Q96T75 97 aa5.38□□□□□ -1.55
SNF8-211ENST00000512243 TRBV7-7A0A0K0K1E9 115 aa5.37□□□□□ -1.55
SNF8-211ENST00000512243 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
SNF8-211ENST00000512243 Q6Q795 121 aa5.36□□□□□ -1.55
SNF8-211ENST00000512243 TEN1Q86WV5 123 aa5.36□□□□□ -1.55
SNF8-211ENST00000512243 CCKP06307 115 aa5.35□□□□□ -1.55
SNF8-211ENST00000512243 RETNLBQ9BQ08 111 aa5.35□□□□□ -1.55
SNF8-211ENST00000512243 VPS25Q9BRG1 176 aa5.35□□□□□ -1.55
SNF8-211ENST00000512243 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
SNF8-211ENST00000512243 A0A1W2PNM2 257 aa5.34□□□□□ -1.55
SNF8-211ENST00000512243 PRR4Q16378 134 aa5.34□□□□□ -1.55
SNF8-211ENST00000512243 Q5XG85 94 aa5.34□□□□□ -1.55
SNF8-211ENST00000512243 C14orf132Q9NPU4 83 aa5.34□□□□□ -1.55
SNF8-211ENST00000512243 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.55
SNF8-211ENST00000512243 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
SNF8-211ENST00000512243 PDE6GP18545 87 aa5.33□□□□□ -1.56
SNF8-211ENST00000512243 OBSCN-AS1Q96MR7 158 aa5.33□□□□□ -1.56
SNF8-211ENST00000512243 A0A087WSZ3 146 aa5.32□□□□□ -1.56
SNF8-211ENST00000512243 A0A1B0GV90 55 aa5.32□□□□□ -1.56
SNF8-211ENST00000512243 Q6ZQT0 140 aa5.32□□□□□ -1.56
SNF8-211ENST00000512243 FP248Q71RG6 208 aaPredicted RBP5.32□□□□□ -1.56
SNF8-211ENST00000512243 F8W1H4 67 aa5.31□□□□□ -1.56
SNF8-211ENST00000512243 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
SNF8-211ENST00000512243 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
SNF8-211ENST00000512243 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
SNF8-211ENST00000512243 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
SNF8-211ENST00000512243 A0A1B0GW54 56 aa5.27□□□□□ -1.57
SNF8-211ENST00000512243 ETDBQ3ZM63 59 aa5.26□□□□□ -1.57
SNF8-211ENST00000512243 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
SNF8-211ENST00000512243 SIGMAR1Q99720 223 aa5.24□□□□□ -1.57
SNF8-211ENST00000512243 LPAP08519 4548 aa5.24□□□□□ -1.57
SNF8-211ENST00000512243 Q96NJ1 140 aa5.23□□□□□ -1.57
SNF8-211ENST00000512243 LRP2P98164 4655 aa5.23□□□□□ -1.57
SNF8-211ENST00000512243 IGKV4-1P06312 121 aa5.21□□□□□ -1.58
SNF8-211ENST00000512243 NREPQ16612 68 aa5.21□□□□□ -1.58
SNF8-211ENST00000512243 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
SNF8-211ENST00000512243 LINC00472Q9H8W2 130 aa5.21□□□□□ -1.58
SNF8-211ENST00000512243 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
SNF8-211ENST00000512243 J3KT08 172 aa5.19□□□□□ -1.58
SNF8-211ENST00000512243 DEFB116Q30KQ4 102 aa5.19□□□□□ -1.58
SNF8-211ENST00000512243 UBL5Q9BZL1 73 aa5.17□□□□□ -1.58
SNF8-211ENST00000512243 Q6ZVQ6 151 aa5.16□□□□□ -1.58
SNF8-211ENST00000512243 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
SNF8-211ENST00000512243 NDUFB1O75438 58 aa5.15□□□□□ -1.59
SNF8-211ENST00000512243 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 FAM240AA0A1B0GVK7 77 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 A8MWP4 228 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 BPY2O14599 106 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
SNF8-211ENST00000512243 C8orf87E5RJ46 101 aa5.13□□□□□ -1.59
SNF8-211ENST00000512243 ACYP1P07311 99 aa5.13□□□□□ -1.59
SNF8-211ENST00000512243 DSCR10P59022 87 aa5.13□□□□□ -1.59
SNF8-211ENST00000512243 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
SNF8-211ENST00000512243 LINC00313P59037 77 aa5.12□□□□□ -1.59
SNF8-211ENST00000512243 J3QR89 54 aa5.11□□□□□ -1.59
SNF8-211ENST00000512243 IGKV3D-7A0A0C4DH55 119 aa5.1□□□□□ -1.59
SNF8-211ENST00000512243 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
SNF8-211ENST00000512243 K7EQZ3 153 aa5.09□□□□□ -1.59
SNF8-211ENST00000512243 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
SNF8-211ENST00000512243 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
SNF8-211ENST00000512243 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
SNF8-211ENST00000512243 C8orf17Q9NRJ1 99 aa5.08□□□□□ -1.6
SNF8-211ENST00000512243 RPL37P61927 97 aaKnown RBP5.07□□□□□ -1.6
SNF8-211ENST00000512243 Q75L30 129 aa5.07□□□□□ -1.6
SNF8-211ENST00000512243 CXCL6P80162 114 aa5.06□□□□□ -1.6
SNF8-211ENST00000512243 ATP5EP2Q5VTU8 51 aa5.06□□□□□ -1.6
SNF8-211ENST00000512243 Q8N9L7 120 aa5.06□□□□□ -1.6
SNF8-211ENST00000512243 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
SNF8-211ENST00000512243 MMP24-AS1A0A0U1RRL7 71 aa5.05□□□□□ -1.6
SNF8-211ENST00000512243 A8MUU9 505 aa5.05□□□□□ -1.6
SNF8-211ENST00000512243 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
SNF8-211ENST00000512243 hDV103S1A0JD37 113 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 K7ERU9 68 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 LINC00643Q86TS7 51 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 TMEM254Q8TBM7 123 aa5.03□□□□□ -1.6
SNF8-211ENST00000512243 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
SNF8-211ENST00000512243 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
SNF8-211ENST00000512243 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
SNF8-211ENST00000512243 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
SNF8-211ENST00000512243 HCG22E2RYF7 251 aa5□□□□□ -1.61
SNF8-211ENST00000512243 CASC2Q6XLA1 102 aa5□□□□□ -1.61
SNF8-211ENST00000512243 NDUFS5O43920 106 aa4.98□□□□□ -1.61
SNF8-211ENST00000512243 HIST1H4AP62805 103 aaKnown RBP4.98□□□□□ -1.61
SNF8-211ENST00000512243 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
SNF8-211ENST00000512243 ZCCHC13Q8WW36 166 aaKnown RBP4.96□□□□□ -1.62
SNF8-211ENST00000512243 KRTAP4-1Q9BYQ7 146 aa4.94□□□□□ -1.62
SNF8-211ENST00000512243 A0A087WVE0 104 aa4.92□□□□□ -1.62
SNF8-211ENST00000512243 A0A0U1RQV1 116 aa4.91□□□□□ -1.62
SNF8-211ENST00000512243 MT-ATP8P03928 68 aa4.89□□□□□ -1.63
SNF8-211ENST00000512243 TP53AIP1Q9HCN2 124 aa4.89□□□□□ -1.63
SNF8-211ENST00000512243 MUC2Q02817 5179 aa4.88□□□□□ -1.63
SNF8-211ENST00000512243 IMUPQ9GZP8 106 aa4.87□□□□□ -1.63
SNF8-211ENST00000512243 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms