RNA–Protein interactions for RNA: ENST00000510372.5

SNX2-209, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 1,412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-209ENST00000510372 A8MTW9 85 aa0.69□□□□□ -2.3
SNX2-209ENST00000510372 H3BNG1 76 aa0.69□□□□□ -2.3
SNX2-209ENST00000510372 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
SNX2-209ENST00000510372 APC2O95996 2303 aa0.68□□□□□ -2.3
SNX2-209ENST00000510372 C9orf92A6NGG3 77 aa0.68□□□□□ -2.3
SNX2-209ENST00000510372 DUOX1Q9NRD9 1551 aa0.67□□□□□ -2.3
SNX2-209ENST00000510372 ACANP16112 2415 aa0.67□□□□□ -2.3
SNX2-209ENST00000510372 RPL39P62891 51 aaKnown RBP0.66□□□□□ -2.3
SNX2-209ENST00000510372 MROH2BQ7Z745 1585 aa0.66□□□□□ -2.3
SNX2-209ENST00000510372 HUWE1Q7Z6Z7 4374 aaKnown RBP0.65□□□□□ -2.3
SNX2-209ENST00000510372 POLR2KP53803 58 aaKnown RBP0.65□□□□□ -2.3
SNX2-209ENST00000510372 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
SNX2-209ENST00000510372 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
SNX2-209ENST00000510372 M0QZ58 72 aa0.64□□□□□ -2.31
SNX2-209ENST00000510372 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
SNX2-209ENST00000510372 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
SNX2-209ENST00000510372 PDZD2O15018 2839 aa0.63□□□□□ -2.31
SNX2-209ENST00000510372 GCN1Q92616 2671 aaKnown RBP0.63□□□□□ -2.31
SNX2-209ENST00000510372 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
SNX2-209ENST00000510372 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
SNX2-209ENST00000510372 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
SNX2-209ENST00000510372 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
SNX2-209ENST00000510372 SPRR2DP22532 72 aa0.62□□□□□ -2.31
SNX2-209ENST00000510372 DCHS2Q6V1P9 2916 aa0.62□□□□□ -2.31
SNX2-209ENST00000510372 GCC2Q8IWJ2 1684 aa0.61□□□□□ -2.31
SNX2-209ENST00000510372 TNP1P09430 55 aa0.61□□□□□ -2.31
SNX2-209ENST00000510372 DMXL1Q9Y485 3027 aa0.61□□□□□ -2.31
SNX2-209ENST00000510372 FLNCQ14315 2725 aa0.6□□□□□ -2.31
SNX2-209ENST00000510372 MTORP42345 2549 aa0.6□□□□□ -2.31
SNX2-209ENST00000510372 FLNBO75369 2602 aaKnown RBP0.6□□□□□ -2.31
SNX2-209ENST00000510372 RPL39LQ96EH5 51 aaKnown RBP0.6□□□□□ -2.31
SNX2-209ENST00000510372 ACACAQ13085 2346 aa0.59□□□□□ -2.31
SNX2-209ENST00000510372 VPS13BQ7Z7G8 4022 aa0.59□□□□□ -2.31
SNX2-209ENST00000510372 CACNA1AO00555 2505 aa0.59□□□□□ -2.31
SNX2-209ENST00000510372 DEFB110Q30KQ9 67 aa0.59□□□□□ -2.31
SNX2-209ENST00000510372 SPTBN4Q9H254 2564 aa0.58□□□□□ -2.32
SNX2-209ENST00000510372 DMBT1Q9UGM3 2413 aaPredicted RBP0.58□□□□□ -2.32
SNX2-209ENST00000510372 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
SNX2-209ENST00000510372 CUBNO60494 3623 aa0.58□□□□□ -2.32
SNX2-209ENST00000510372 LRP1Q07954 4544 aaKnown RBP0.58□□□□□ -2.32
SNX2-209ENST00000510372 UTP20O75691 2785 aaKnown RBP0.58□□□□□ -2.32
SNX2-209ENST00000510372 LRRK2Q5S007 2527 aa0.58□□□□□ -2.32
SNX2-209ENST00000510372 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
SNX2-209ENST00000510372 TOMM7Q9P0U1 55 aa0.57□□□□□ -2.32
SNX2-209ENST00000510372 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
SNX2-209ENST00000510372 SETD2Q9BYW2 2564 aaPredicted RBP0.57□□□□□ -2.32
SNX2-209ENST00000510372 RIF1Q5UIP0 2472 aaKnown RBP0.57□□□□□ -2.32
SNX2-209ENST00000510372 TACC2O95359 2948 aa0.57□□□□□ -2.32
SNX2-209ENST00000510372 LEAP2Q969E1 77 aa0.56□□□□□ -2.32
SNX2-209ENST00000510372 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
SNX2-209ENST00000510372 SPENQ96T58 3664 aaKnown RBP0.56□□□□□ -2.32
SNX2-209ENST00000510372 KALRNO60229 2985 aa0.55□□□□□ -2.32
SNX2-209ENST00000510372 SPRR2BP35325 72 aa0.55□□□□□ -2.32
SNX2-209ENST00000510372 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
SNX2-209ENST00000510372 LPAP08519 4548 aa0.53□□□□□ -2.32
SNX2-209ENST00000510372 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
SNX2-209ENST00000510372 HECTD4Q9Y4D8 3996 aa0.53□□□□□ -2.32
SNX2-209ENST00000510372 ANKHD1Q8IWZ3 2542 aaKnown RBP0.53□□□□□ -2.32
SNX2-209ENST00000510372 EPG5Q9HCE0 2579 aa0.53□□□□□ -2.33
SNX2-209ENST00000510372 RANBP2P49792 3224 aaKnown RBP0.53□□□□□ -2.33
SNX2-209ENST00000510372 ANKRD11Q6UB99 2663 aaPredicted RBP0.52□□□□□ -2.33
SNX2-209ENST00000510372 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 HTTP42858 3142 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 CHD7Q9P2D1 2997 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 SPART-AS1P0CW21 52 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 ARHGAP5-AS1Q96IT6 56 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 STAB1Q9NY15 2570 aa0.52□□□□□ -2.33
SNX2-209ENST00000510372 SONP18583 2426 aaKnown RBP0.52□□□□□ -2.33
SNX2-209ENST00000510372 NBEAQ8NFP9 2946 aa0.51□□□□□ -2.33
SNX2-209ENST00000510372 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
SNX2-209ENST00000510372 FLNAP21333 2647 aaKnown RBP0.51□□□□□ -2.33
SNX2-209ENST00000510372 NBEAL2Q6ZNJ1 2754 aa0.5□□□□□ -2.33
SNX2-209ENST00000510372 FAM186AA6NE01 2351 aa0.5□□□□□ -2.33
SNX2-209ENST00000510372 SACSQ9NZJ4 4579 aa0.5□□□□□ -2.33
SNX2-209ENST00000510372 FASNP49327 2511 aaKnown RBP0.5□□□□□ -2.33
SNX2-209ENST00000510372 SPTBN5Q9NRC6 3674 aaKnown RBP0.49□□□□□ -2.33
SNX2-209ENST00000510372 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
SNX2-209ENST00000510372 DNAH11Q96DT5 4516 aa0.49□□□□□ -2.33
SNX2-209ENST00000510372 COL6A3P12111 3177 aa0.49□□□□□ -2.33
SNX2-209ENST00000510372 AKAP9Q99996 3911 aa0.49□□□□□ -2.33
SNX2-209ENST00000510372 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
SNX2-209ENST00000510372 DNAH3Q8TD57 4116 aa0.48□□□□□ -2.33
SNX2-209ENST00000510372 PKD1P98161 4303 aa0.47□□□□□ -2.33
SNX2-209ENST00000510372 MAST4O15021 2626 aa0.47□□□□□ -2.33
SNX2-209ENST00000510372 HSPG2P98160 4391 aa0.47□□□□□ -2.33
SNX2-209ENST00000510372 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
SNX2-209ENST00000510372 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
SNX2-209ENST00000510372 MACF1Q9UPN3 7388 aaKnown RBP0.46□□□□□ -2.34
SNX2-209ENST00000510372 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
SNX2-209ENST00000510372 CRYBG3Q68DQ2 2970 aa0.46□□□□□ -2.34
SNX2-209ENST00000510372 CCDC168Q8NDH2 2452 aa0.46□□□□□ -2.34
SNX2-209ENST00000510372 ACACBO00763 2458 aa0.45□□□□□ -2.34
SNX2-209ENST00000510372 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
SNX2-209ENST00000510372 SPRR2AP35326 72 aa0.45□□□□□ -2.34
SNX2-209ENST00000510372 KMT2DO14686 5537 aa0.44□□□□□ -2.34
SNX2-209ENST00000510372 ZANQ9Y493 2812 aa0.44□□□□□ -2.34
SNX2-209ENST00000510372 PKHD1L1Q86WI1 4243 aa0.44□□□□□ -2.34
SNX2-209ENST00000510372 TEP1Q99973 2627 aaKnown RBP0.44□□□□□ -2.34
SNX2-209ENST00000510372 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SNX2-209ENST00000510372 MAP1AP78559 2803 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms