RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 HRES1P13985 223 aa2.9□□□□□ -1.94
PHF3-210ENST00000509876 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
PHF3-210ENST00000509876 NF1P21359 2839 aa2.9□□□□□ -1.95
PHF3-210ENST00000509876 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.95
PHF3-210ENST00000509876 PSPHP1O15172 72 aa2.89□□□□□ -1.95
PHF3-210ENST00000509876 KLKP1Q107X0 134 aa2.89□□□□□ -1.95
PHF3-210ENST00000509876 OCR1Q9BZK8 76 aa2.89□□□□□ -1.95
PHF3-210ENST00000509876 SMG1Q96Q15 3661 aaKnown RBP2.89□□□□□ -1.95
PHF3-210ENST00000509876 STAB2Q8WWQ8 2551 aa2.88□□□□□ -1.95
PHF3-210ENST00000509876 LINC01554Q52M75 96 aa2.87□□□□□ -1.95
PHF3-210ENST00000509876 SPENQ96T58 3664 aaKnown RBP2.87□□□□□ -1.95
PHF3-210ENST00000509876 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
PHF3-210ENST00000509876 TPRXLQ17RH7 258 aa2.87□□□□□ -1.95
PHF3-210ENST00000509876 FBN1P35555 2871 aaKnown RBP2.87□□□□□ -1.95
PHF3-210ENST00000509876 Q8N9P0 234 aaPredicted RBP2.87□□□□□ -1.95
PHF3-210ENST00000509876 UQCR11O14957 56 aa2.85□□□□□ -1.95
PHF3-210ENST00000509876 H1FX-AS1Q4G0G2 97 aa2.85□□□□□ -1.95
PHF3-210ENST00000509876 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.95
PHF3-210ENST00000509876 KRTAP10-8P60410 259 aa2.83□□□□□ -1.96
PHF3-210ENST00000509876 TENM2Q9NT68 2774 aa2.83□□□□□ -1.96
PHF3-210ENST00000509876 XP32Q5T750 250 aa2.83□□□□□ -1.96
PHF3-210ENST00000509876 SVIPQ8NHG7 77 aa2.83□□□□□ -1.96
PHF3-210ENST00000509876 A8MUU9 505 aa2.82□□□□□ -1.96
PHF3-210ENST00000509876 NOTCH2NLQ7Z3S9 236 aa2.82□□□□□ -1.96
PHF3-210ENST00000509876 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
PHF3-210ENST00000509876 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
PHF3-210ENST00000509876 H7BZZ5 65 aa2.82□□□□□ -1.96
PHF3-210ENST00000509876 TENM1Q9UKZ4 2725 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 ZFHX3Q15911 3703 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 R4GN34 69 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 A0A0D9SG42 100 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 RPS28P62857 69 aaKnown RBP2.81□□□□□ -1.96
PHF3-210ENST00000509876 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
PHF3-210ENST00000509876 LCA10Q71F78 164 aa2.79□□□□□ -1.96
PHF3-210ENST00000509876 FBN3Q75N90 2809 aa2.79□□□□□ -1.96
PHF3-210ENST00000509876 KRTAP13-3Q3SY46 172 aa2.79□□□□□ -1.96
PHF3-210ENST00000509876 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
PHF3-210ENST00000509876 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
PHF3-210ENST00000509876 A0A1B0GU33 70 aa2.78□□□□□ -1.96
PHF3-210ENST00000509876 VWFP04275 2813 aa2.78□□□□□ -1.96
PHF3-210ENST00000509876 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
PHF3-210ENST00000509876 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
PHF3-210ENST00000509876 ADM2Q7Z4H4 148 aa2.77□□□□□ -1.97
PHF3-210ENST00000509876 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
PHF3-210ENST00000509876 M0QZ58 72 aa2.76□□□□□ -1.97
PHF3-210ENST00000509876 CSMD2Q7Z408 3487 aa2.75□□□□□ -1.97
PHF3-210ENST00000509876 DNAH9Q9NYC9 4486 aa2.74□□□□□ -1.97
PHF3-210ENST00000509876 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
PHF3-210ENST00000509876 CDC42SE1Q9NRR8 79 aa2.74□□□□□ -1.97
PHF3-210ENST00000509876 PKD1L1Q8TDX9 2849 aa2.73□□□□□ -1.97
PHF3-210ENST00000509876 DMBT1Q9UGM3 2413 aaPredicted RBP2.73□□□□□ -1.97
PHF3-210ENST00000509876 ANK2Q01484 3957 aa2.73□□□□□ -1.97
PHF3-210ENST00000509876 TRRAPQ9Y4A5 3859 aa2.73□□□□□ -1.97
PHF3-210ENST00000509876 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
PHF3-210ENST00000509876 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
PHF3-210ENST00000509876 SVEP1Q4LDE5 3571 aa2.71□□□□□ -1.98
PHF3-210ENST00000509876 Q1T7F1 81 aa2.7□□□□□ -1.98
PHF3-210ENST00000509876 KRTAP16-1A8MUX0 517 aa2.69□□□□□ -1.98
PHF3-210ENST00000509876 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
PHF3-210ENST00000509876 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
PHF3-210ENST00000509876 KRTAP4-5Q9BYR2 181 aa2.67□□□□□ -1.98
PHF3-210ENST00000509876 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
PHF3-210ENST00000509876 KRTAP10-4P60372 401 aaPredicted RBP2.66□□□□□ -1.98
PHF3-210ENST00000509876 KRTAP10-10P60014 251 aa2.65□□□□□ -1.98
PHF3-210ENST00000509876 VPS13CQ709C8 3753 aa2.65□□□□□ -1.99
PHF3-210ENST00000509876 TGP01266 2768 aa2.65□□□□□ -1.99
PHF3-210ENST00000509876 MEGF8Q7Z7M0 2845 aa2.63□□□□□ -1.99
PHF3-210ENST00000509876 DNAH1Q9P2D7 4330 aa2.62□□□□□ -1.99
PHF3-210ENST00000509876 CYSTM1Q9H1C7 97 aa2.62□□□□□ -1.99
PHF3-210ENST00000509876 CUBNO60494 3623 aa2.61□□□□□ -1.99
PHF3-210ENST00000509876 CMYA5Q8N3K9 4069 aa2.61□□□□□ -1.99
PHF3-210ENST00000509876 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
PHF3-210ENST00000509876 DNAH3Q8TD57 4116 aa2.61□□□□□ -1.99
PHF3-210ENST00000509876 DNAH6Q9C0G6 4158 aa2.6□□□□□ -1.99
PHF3-210ENST00000509876 DNAH11Q96DT5 4516 aa2.6□□□□□ -1.99
PHF3-210ENST00000509876 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -1.99
PHF3-210ENST00000509876 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
PHF3-210ENST00000509876 DNHD1Q96M86 4753 aa2.59□□□□□ -2
PHF3-210ENST00000509876 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
PHF3-210ENST00000509876 DNAH10Q8IVF4 4471 aa2.58□□□□□ -2
PHF3-210ENST00000509876 Q5VV11 94 aa2.58□□□□□ -2
PHF3-210ENST00000509876 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
PHF3-210ENST00000509876 ROMO1P60602 79 aa2.57□□□□□ -2
PHF3-210ENST00000509876 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
PHF3-210ENST00000509876 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
PHF3-210ENST00000509876 PRKDCP78527 4128 aaKnown RBP2.54□□□□□ -2
PHF3-210ENST00000509876 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2.01
PHF3-210ENST00000509876 TNP1P09430 55 aa2.52□□□□□ -2.01
PHF3-210ENST00000509876 STARD9Q9P2P6 4700 aa2.52□□□□□ -2.01
PHF3-210ENST00000509876 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
PHF3-210ENST00000509876 A8MU10 97 aa2.51□□□□□ -2.01
PHF3-210ENST00000509876 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
PHF3-210ENST00000509876 H0YAA0 97 aa2.48□□□□□ -2.01
PHF3-210ENST00000509876 DNAH7Q8WXX0 4024 aa2.48□□□□□ -2.01
PHF3-210ENST00000509876 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
PHF3-210ENST00000509876 COL7A1Q02388 2944 aa2.47□□□□□ -2.01
PHF3-210ENST00000509876 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
PHF3-210ENST00000509876 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms