RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
TOPBP1-203ENST00000503464 LINC00472Q9H8W2 130 aa3.98□□□□□ -1.77
TOPBP1-203ENST00000503464 NREPQ16612 68 aa3.97□□□□□ -1.77
TOPBP1-203ENST00000503464 SIGMAR1Q99720 223 aa3.97□□□□□ -1.77
TOPBP1-203ENST00000503464 FLG2Q5D862 2391 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-203ENST00000503464 MYCBP2O75592 4640 aa3.97□□□□□ -1.77
TOPBP1-203ENST00000503464 DSCR10P59022 87 aa3.96□□□□□ -1.78
TOPBP1-203ENST00000503464 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
TOPBP1-203ENST00000503464 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
TOPBP1-203ENST00000503464 ATP5EP2Q5VTU8 51 aa3.96□□□□□ -1.78
TOPBP1-203ENST00000503464 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
TOPBP1-203ENST00000503464 CXCL6P80162 114 aa3.95□□□□□ -1.78
TOPBP1-203ENST00000503464 Q8N9L7 120 aa3.95□□□□□ -1.78
TOPBP1-203ENST00000503464 A0A087WVE0 104 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 BPY2O14599 106 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 Q5XG85 94 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
TOPBP1-203ENST00000503464 K7EQZ3 153 aa3.93□□□□□ -1.78
TOPBP1-203ENST00000503464 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
TOPBP1-203ENST00000503464 SPINK1P00995 79 aa3.92□□□□□ -1.78
TOPBP1-203ENST00000503464 C1orf195Q5TG92 126 aa3.92□□□□□ -1.78
TOPBP1-203ENST00000503464 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
TOPBP1-203ENST00000503464 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-203ENST00000503464 A8MWP4 228 aa3.9□□□□□ -1.79
TOPBP1-203ENST00000503464 HIST1H4AP62805 103 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-203ENST00000503464 SPAG11AQ6PDA7 123 aa3.9□□□□□ -1.79
TOPBP1-203ENST00000503464 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
TOPBP1-203ENST00000503464 J3KT08 172 aa3.89□□□□□ -1.79
TOPBP1-203ENST00000503464 PRR15Q8IV56 129 aa3.89□□□□□ -1.79
TOPBP1-203ENST00000503464 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
TOPBP1-203ENST00000503464 FAM236AA0A1B0GUQ0 79 aa3.88□□□□□ -1.79
TOPBP1-203ENST00000503464 FAM236BA0A1B0GV22 79 aa3.88□□□□□ -1.79
TOPBP1-203ENST00000503464 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
TOPBP1-203ENST00000503464 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
TOPBP1-203ENST00000503464 A0A1B0GVX0 72 aa3.87□□□□□ -1.79
TOPBP1-203ENST00000503464 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-203ENST00000503464 OXTP01178 125 aa3.87□□□□□ -1.79
TOPBP1-203ENST00000503464 SCGB1A1P11684 91 aa3.87□□□□□ -1.79
TOPBP1-203ENST00000503464 RETNLBQ9BQ08 111 aa3.86□□□□□ -1.79
TOPBP1-203ENST00000503464 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-203ENST00000503464 H3BS24 57 aa3.85□□□□□ -1.79
TOPBP1-203ENST00000503464 C8orf17Q9NRJ1 99 aa3.85□□□□□ -1.79
TOPBP1-203ENST00000503464 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
TOPBP1-203ENST00000503464 HCG22E2RYF7 251 aa3.84□□□□□ -1.79
TOPBP1-203ENST00000503464 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
TOPBP1-203ENST00000503464 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
TOPBP1-203ENST00000503464 NDUFB1O75438 58 aa3.83□□□□□ -1.8
TOPBP1-203ENST00000503464 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
TOPBP1-203ENST00000503464 OCR1Q9BZK8 76 aa3.81□□□□□ -1.8
TOPBP1-203ENST00000503464 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
TOPBP1-203ENST00000503464 C8orf87E5RJ46 101 aa3.8□□□□□ -1.8
TOPBP1-203ENST00000503464 ATOX1O00244 68 aa3.8□□□□□ -1.8
TOPBP1-203ENST00000503464 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
TOPBP1-203ENST00000503464 LINC00313P59037 77 aa3.78□□□□□ -1.8
TOPBP1-203ENST00000503464 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-203ENST00000503464 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
TOPBP1-203ENST00000503464 TRAV7A0A075B6U4 112 aa3.77□□□□□ -1.81
TOPBP1-203ENST00000503464 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
TOPBP1-203ENST00000503464 PCP4P48539 62 aa3.77□□□□□ -1.81
TOPBP1-203ENST00000503464 FP248Q71RG6 208 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-203ENST00000503464 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-203ENST00000503464 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
TOPBP1-203ENST00000503464 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
TOPBP1-203ENST00000503464 LPAP08519 4548 aa3.75□□□□□ -1.81
TOPBP1-203ENST00000503464 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
TOPBP1-203ENST00000503464 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
TOPBP1-203ENST00000503464 COX7CP15954 63 aa3.75□□□□□ -1.81
TOPBP1-203ENST00000503464 Q5W150 140 aa3.74□□□□□ -1.81
TOPBP1-203ENST00000503464 SMIM20Q8N5G0 67 aa3.74□□□□□ -1.81
TOPBP1-203ENST00000503464 CYSTM1Q9H1C7 97 aa3.74□□□□□ -1.81
TOPBP1-203ENST00000503464 A8MUU9 505 aa3.73□□□□□ -1.81
TOPBP1-203ENST00000503464 PRR4Q16378 134 aa3.73□□□□□ -1.81
TOPBP1-203ENST00000503464 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
TOPBP1-203ENST00000503464 UQCRQO14949 82 aa3.72□□□□□ -1.81
TOPBP1-203ENST00000503464 NDUFS5O43920 106 aa3.72□□□□□ -1.81
TOPBP1-203ENST00000503464 HERC1Q15751 4861 aa3.72□□□□□ -1.81
TOPBP1-203ENST00000503464 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
TOPBP1-203ENST00000503464 A0A0U1RQV1 116 aa3.71□□□□□ -1.82
TOPBP1-203ENST00000503464 ZCCHC13Q8WW36 166 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-203ENST00000503464 TP53AIP1Q9HCN2 124 aa3.71□□□□□ -1.82
TOPBP1-203ENST00000503464 LRP2P98164 4655 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 TRAV22A0A0B4J277 110 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 H0Y9P7 68 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 Q75L30 129 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
TOPBP1-203ENST00000503464 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
TOPBP1-203ENST00000503464 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
TOPBP1-203ENST00000503464 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
TOPBP1-203ENST00000503464 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-203ENST00000503464 LINC00208Q96KT6 92 aa3.67□□□□□ -1.82
TOPBP1-203ENST00000503464 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
TOPBP1-203ENST00000503464 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
TOPBP1-203ENST00000503464 H3BPC8 53 aa3.65□□□□□ -1.83
TOPBP1-203ENST00000503464 H7BZZ5 65 aa3.65□□□□□ -1.83
TOPBP1-203ENST00000503464 MP68P56378 58 aa3.65□□□□□ -1.83
TOPBP1-203ENST00000503464 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
TOPBP1-203ENST00000503464 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms