RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 C8orf17Q9NRJ1 99 aa13.8□□□□□ -0.2
PPP1R3F-205ENST00000495799 MT1HL1P0DM35 61 aa13.8□□□□□ -0.2
PPP1R3F-205ENST00000495799 CASC2Q6XLA1 102 aa13.79□□□□□ -0.2
PPP1R3F-205ENST00000495799 LRP1Q07954 4544 aaKnown RBP13.78□□□□□ -0.2
PPP1R3F-205ENST00000495799 MMP24-AS1A0A0U1RRL7 71 aa13.78□□□□□ -0.2
PPP1R3F-205ENST00000495799 WFDC13Q8IUB5 93 aa13.78□□□□□ -0.2
PPP1R3F-205ENST00000495799 ANAPC13Q9BS18 74 aa13.78□□□□□ -0.2
PPP1R3F-205ENST00000495799 SMIM20Q8N5G0 67 aa13.77□□□□□ -0.21
PPP1R3F-205ENST00000495799 TNXBP22105 4242 aa13.77□□□□□ -0.21
PPP1R3F-205ENST00000495799 KRTAP29-1A8MX34 341 aaPredicted RBP13.75□□□□□ -0.21
PPP1R3F-205ENST00000495799 hDV103S1A0JD37 113 aa13.74□□□□□ -0.21
PPP1R3F-205ENST00000495799 FLG2Q5D862 2391 aaPredicted RBP13.71□□□□□ -0.21
PPP1R3F-205ENST00000495799 LINC00313P59037 77 aa13.7□□□□□ -0.22
PPP1R3F-205ENST00000495799 HERC2O95714 4834 aa13.7□□□□□ -0.22
PPP1R3F-205ENST00000495799 PCP4P48539 62 aa13.69□□□□□ -0.22
PPP1R3F-205ENST00000495799 TMEM254Q8TBM7 123 aa13.69□□□□□ -0.22
PPP1R3F-205ENST00000495799 TRAV7A0A075B6U4 112 aa13.65□□□□□ -0.22
PPP1R3F-205ENST00000495799 SERP2Q8N6R1 65 aa13.65□□□□□ -0.22
PPP1R3F-205ENST00000495799 MRPL34Q9BQ48 92 aaKnown RBP13.65□□□□□ -0.22
PPP1R3F-205ENST00000495799 NOTCH2NLQ7Z3S9 236 aa13.64□□□□□ -0.23
PPP1R3F-205ENST00000495799 RETNLBQ9BQ08 111 aa13.64□□□□□ -0.23
PPP1R3F-205ENST00000495799 FP248Q71RG6 208 aaPredicted RBP13.64□□□□□ -0.23
PPP1R3F-205ENST00000495799 OCR1Q9BZK8 76 aa13.61□□□□□ -0.23
PPP1R3F-205ENST00000495799 MYCBP2O75592 4640 aa13.6□□□□□ -0.23
PPP1R3F-205ENST00000495799 COX7CP15954 63 aa13.58□□□□□ -0.24
PPP1R3F-205ENST00000495799 J3QL48 77 aa13.57□□□□□ -0.24
PPP1R3F-205ENST00000495799 TP53AIP1Q9HCN2 124 aa13.56□□□□□ -0.24
PPP1R3F-205ENST00000495799 NDUFS5O43920 106 aa13.54□□□□□ -0.24
PPP1R3F-205ENST00000495799 UQCRQO14949 82 aa13.54□□□□□ -0.24
PPP1R3F-205ENST00000495799 KRTAP16-1A8MUX0 517 aa13.51□□□□□ -0.25
PPP1R3F-205ENST00000495799 Q8N9P0 234 aaPredicted RBP13.48□□□□□ -0.25
PPP1R3F-205ENST00000495799 IGLV7-46A0A075B6I9 117 aa13.47□□□□□ -0.25
PPP1R3F-205ENST00000495799 DMBT1Q9UGM3 2413 aaPredicted RBP13.47□□□□□ -0.25
PPP1R3F-205ENST00000495799 ABCA13Q86UQ4 5058 aa13.46□□□□□ -0.25
PPP1R3F-205ENST00000495799 C5orf47Q569G3 176 aa13.45□□□□□ -0.26
PPP1R3F-205ENST00000495799 C9orf92A6NGG3 77 aa13.44□□□□□ -0.26
PPP1R3F-205ENST00000495799 CCDC179H3BU77 68 aa13.4□□□□□ -0.26
PPP1R3F-205ENST00000495799 MP68P56378 58 aa13.4□□□□□ -0.26
PPP1R3F-205ENST00000495799 PRR4Q16378 134 aa13.4□□□□□ -0.26
PPP1R3F-205ENST00000495799 TRAV22A0A0B4J277 110 aa13.39□□□□□ -0.27
PPP1R3F-205ENST00000495799 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
PPP1R3F-205ENST00000495799 H0Y9P7 68 aa13.36□□□□□ -0.27
PPP1R3F-205ENST00000495799 H3BPC8 53 aa13.34□□□□□ -0.27
PPP1R3F-205ENST00000495799 C20orf166-AS1Q96NR2 134 aa13.34□□□□□ -0.27
PPP1R3F-205ENST00000495799 A8MUU9 505 aa13.32□□□□□ -0.28
PPP1R3F-205ENST00000495799 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
PPP1R3F-205ENST00000495799 KLKP1Q107X0 134 aa13.29□□□□□ -0.28
PPP1R3F-205ENST00000495799 A0A0U1RQV1 116 aa13.29□□□□□ -0.28
PPP1R3F-205ENST00000495799 TPRXLQ17RH7 258 aa13.26□□□□□ -0.29
PPP1R3F-205ENST00000495799 Q75L30 129 aa13.26□□□□□ -0.29
PPP1R3F-205ENST00000495799 LINC00208Q96KT6 92 aa13.25□□□□□ -0.29
PPP1R3F-205ENST00000495799 SNURFQ9Y675 71 aa13.25□□□□□ -0.29
PPP1R3F-205ENST00000495799 Q5W150 140 aa13.23□□□□□ -0.29
PPP1R3F-205ENST00000495799 C1orf64Q8NEQ6 169 aa13.22□□□□□ -0.29
PPP1R3F-205ENST00000495799 NDUFC1O43677 76 aa13.21□□□□□ -0.29
PPP1R3F-205ENST00000495799 ZCCHC13Q8WW36 166 aaKnown RBP13.21□□□□□ -0.29
PPP1R3F-205ENST00000495799 XP32Q5T750 250 aa13.18□□□□□ -0.3
PPP1R3F-205ENST00000495799 LOC101927531A0A1B0GV80 90 aa13.18□□□□□ -0.3
PPP1R3F-205ENST00000495799 RPL37P61927 97 aaKnown RBP13.14□□□□□ -0.31
PPP1R3F-205ENST00000495799 CYSTM1Q9H1C7 97 aa13.11□□□□□ -0.31
PPP1R3F-205ENST00000495799 ATP11AUNQ6ZP68 121 aa13.1□□□□□ -0.31
PPP1R3F-205ENST00000495799 H7BZZ5 65 aa13.07□□□□□ -0.32
PPP1R3F-205ENST00000495799 IGKV2-30P06310 120 aa13.07□□□□□ -0.32
PPP1R3F-205ENST00000495799 TMEM258P61165 79 aa13.03□□□□□ -0.32
PPP1R3F-205ENST00000495799 CYP4F30PQ9H0H9 118 aa13.03□□□□□ -0.32
PPP1R3F-205ENST00000495799 IGKV2D-30A0A075B6S6 120 aa13□□□□□ -0.33
PPP1R3F-205ENST00000495799 C7orf65Q6ZTY9 151 aa13□□□□□ -0.33
PPP1R3F-205ENST00000495799 PCLOQ9Y6V0 5065 aa13□□□□□ -0.33
PPP1R3F-205ENST00000495799 PCOTHQ58A44 107 aa12.96□□□□□ -0.33
PPP1R3F-205ENST00000495799 ATP5EP56381 51 aaPredicted RBP12.92□□□□□ -0.34
PPP1R3F-205ENST00000495799 SPANXA2-OT1Q8N9U9 137 aa12.91□□□□□ -0.34
PPP1R3F-205ENST00000495799 FAM236DA0A1B0GTK5 79 aa12.89□□□□□ -0.35
PPP1R3F-205ENST00000495799 FAM236CP0DP71 79 aa12.89□□□□□ -0.35
PPP1R3F-205ENST00000495799 SPINK7P58062 85 aa12.86□□□□□ -0.35
PPP1R3F-205ENST00000495799 SEC61BP60468 96 aaKnown RBP12.85□□□□□ -0.35
PPP1R3F-205ENST00000495799 LPAP08519 4548 aa12.81□□□□□ -0.36
PPP1R3F-205ENST00000495799 HRES1P13985 223 aa12.81□□□□□ -0.36
PPP1R3F-205ENST00000495799 LRP2P98164 4655 aa12.72□□□□□ -0.37
PPP1R3F-205ENST00000495799 HERC1Q15751 4861 aa12.68□□□□□ -0.38
PPP1R3F-205ENST00000495799 C4orf26Q17RF5 130 aa12.62□□□□□ -0.39
PPP1R3F-205ENST00000495799 DMAC1Q96GE9 116 aa12.62□□□□□ -0.39
PPP1R3F-205ENST00000495799 HMCN2Q8NDA2 5059 aa12.61□□□□□ -0.39
PPP1R3F-205ENST00000495799 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
PPP1R3F-205ENST00000495799 A8MUN3 132 aa12.6□□□□□ -0.39
PPP1R3F-205ENST00000495799 ACYP2P14621 99 aa12.59□□□□□ -0.39
PPP1R3F-205ENST00000495799 MUC17Q685J3 4493 aa12.55□□□□□ -0.4
PPP1R3F-205ENST00000495799 COX6B2Q6YFQ2 88 aa12.55□□□□□ -0.4
PPP1R3F-205ENST00000495799 RPS28P62857 69 aaKnown RBP12.52□□□□□ -0.4
PPP1R3F-205ENST00000495799 RBM12B-AS1Q9P1G2 102 aa12.48□□□□□ -0.41
PPP1R3F-205ENST00000495799 COA5Q86WW8 74 aa12.47□□□□□ -0.41
PPP1R3F-205ENST00000495799 MPLKIPQ8TAP9 179 aa12.42□□□□□ -0.42
PPP1R3F-205ENST00000495799 KRTAP3-1Q9BYR8 98 aa12.41□□□□□ -0.42
PPP1R3F-205ENST00000495799 CHKB-CPT1BH3BT56 60 aa12.39□□□□□ -0.43
PPP1R3F-205ENST00000495799 KRTAP4-1Q9BYQ7 146 aa12.38□□□□□ -0.43
PPP1R3F-205ENST00000495799 H1FX-AS1Q4G0G2 97 aa12.28□□□□□ -0.44
PPP1R3F-205ENST00000495799 SMIM26A0A096LP01 95 aa12.27□□□□□ -0.45
PPP1R3F-205ENST00000495799 SPTSSBQ8NFR3 76 aa12.23□□□□□ -0.45
PPP1R3F-205ENST00000495799 S4R3F8 94 aa12.18□□□□□ -0.46
PPP1R3F-205ENST00000495799 LCA10Q71F78 164 aa12.09□□□□□ -0.47
PPP1R3F-205ENST00000495799 V9GYY9 64 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms