RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
LINC01558-202ENST00000495520 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
LINC01558-202ENST00000495520 HERC2O95714 4834 aa11.53□□□□□ -0.56
LINC01558-202ENST00000495520 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 CYSTM1Q9H1C7 97 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 SPINK1P00995 79 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 C1orf195Q5TG92 126 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
LINC01558-202ENST00000495520 C4orf48Q5BLP8 95 aa11.49□□□□□ -0.57
LINC01558-202ENST00000495520 RPS29P62273 56 aaKnown RBP11.48□□□□□ -0.57
LINC01558-202ENST00000495520 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 hDV103S1A0JD37 113 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 SPAG11AQ6PDA7 123 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 LINC00304Q8N9R0 145 aa11.46□□□□□ -0.58
LINC01558-202ENST00000495520 TMEM254Q8TBM7 123 aa11.44□□□□□ -0.58
LINC01558-202ENST00000495520 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
LINC01558-202ENST00000495520 NOTCH2NLQ7Z3S9 236 aa11.43□□□□□ -0.58
LINC01558-202ENST00000495520 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
LINC01558-202ENST00000495520 C8orf87E5RJ46 101 aa11.4□□□□□ -0.59
LINC01558-202ENST00000495520 SNURFQ9Y675 71 aa11.39□□□□□ -0.59
LINC01558-202ENST00000495520 LRP1Q07954 4544 aaKnown RBP11.39□□□□□ -0.59
LINC01558-202ENST00000495520 ABCA13Q86UQ4 5058 aa11.38□□□□□ -0.59
LINC01558-202ENST00000495520 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
LINC01558-202ENST00000495520 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
LINC01558-202ENST00000495520 H7BZZ5 65 aa11.36□□□□□ -0.59
LINC01558-202ENST00000495520 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
LINC01558-202ENST00000495520 NDUFC1O43677 76 aa11.35□□□□□ -0.59
LINC01558-202ENST00000495520 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
LINC01558-202ENST00000495520 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
LINC01558-202ENST00000495520 TMEM258P61165 79 aa11.33□□□□□ -0.6
LINC01558-202ENST00000495520 MYCBP2O75592 4640 aa11.33□□□□□ -0.6
LINC01558-202ENST00000495520 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
LINC01558-202ENST00000495520 LINC00313P59037 77 aa11.3□□□□□ -0.6
LINC01558-202ENST00000495520 TNXBP22105 4242 aa11.3□□□□□ -0.6
LINC01558-202ENST00000495520 OXTP01178 125 aa11.29□□□□□ -0.6
LINC01558-202ENST00000495520 H3BPC8 53 aa11.28□□□□□ -0.6
LINC01558-202ENST00000495520 MP68P56378 58 aa11.28□□□□□ -0.6
LINC01558-202ENST00000495520 H0Y9P7 68 aa11.26□□□□□ -0.61
LINC01558-202ENST00000495520 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
LINC01558-202ENST00000495520 KRTAP16-1A8MUX0 517 aa11.24□□□□□ -0.61
LINC01558-202ENST00000495520 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
LINC01558-202ENST00000495520 Q8N9P0 234 aaPredicted RBP11.23□□□□□ -0.61
LINC01558-202ENST00000495520 NDUFS5O43920 106 aa11.21□□□□□ -0.61
LINC01558-202ENST00000495520 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
LINC01558-202ENST00000495520 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 FAM236DA0A1B0GTK5 79 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 FAM236CP0DP71 79 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
LINC01558-202ENST00000495520 J3QL48 77 aa11.15□□□□□ -0.62
LINC01558-202ENST00000495520 Q5W150 140 aa11.13□□□□□ -0.63
LINC01558-202ENST00000495520 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
LINC01558-202ENST00000495520 PCLOQ9Y6V0 5065 aa11.12□□□□□ -0.63
LINC01558-202ENST00000495520 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
LINC01558-202ENST00000495520 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
LINC01558-202ENST00000495520 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
LINC01558-202ENST00000495520 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.64
LINC01558-202ENST00000495520 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
LINC01558-202ENST00000495520 SERP1Q9Y6X1 66 aa10.99□□□□□ -0.65
LINC01558-202ENST00000495520 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
LINC01558-202ENST00000495520 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
LINC01558-202ENST00000495520 C20orf166-AS1Q96NR2 134 aa10.97□□□□□ -0.65
LINC01558-202ENST00000495520 A8MUU9 505 aa10.96□□□□□ -0.65
LINC01558-202ENST00000495520 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
LINC01558-202ENST00000495520 IGLV7-46A0A075B6I9 117 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 PRR4Q16378 134 aa10.88□□□□□ -0.67
LINC01558-202ENST00000495520 Q75L30 129 aa10.83□□□□□ -0.68
LINC01558-202ENST00000495520 HRES1P13985 223 aa10.77□□□□□ -0.69
LINC01558-202ENST00000495520 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
LINC01558-202ENST00000495520 HERC1Q15751 4861 aa10.75□□□□□ -0.69
LINC01558-202ENST00000495520 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
LINC01558-202ENST00000495520 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
LINC01558-202ENST00000495520 XP32Q5T750 250 aa10.69□□□□□ -0.7
LINC01558-202ENST00000495520 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
LINC01558-202ENST00000495520 TPRXLQ17RH7 258 aa10.66□□□□□ -0.7
LINC01558-202ENST00000495520 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
LINC01558-202ENST00000495520 COA5Q86WW8 74 aa10.65□□□□□ -0.7
LINC01558-202ENST00000495520 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 LPAP08519 4548 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 ACYP2P14621 99 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 SPINK7P58062 85 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
LINC01558-202ENST00000495520 Q1T7F1 81 aa10.5□□□□□ -0.73
LINC01558-202ENST00000495520 A8MUN3 132 aa10.49□□□□□ -0.73
LINC01558-202ENST00000495520 C4orf26Q17RF5 130 aa10.48□□□□□ -0.73
LINC01558-202ENST00000495520 LRP2P98164 4655 aa10.47□□□□□ -0.73
LINC01558-202ENST00000495520 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
LINC01558-202ENST00000495520 KRTAP3-1Q9BYR8 98 aa10.43□□□□□ -0.74
LINC01558-202ENST00000495520 V9GYY9 64 aa10.41□□□□□ -0.74
LINC01558-202ENST00000495520 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
LINC01558-202ENST00000495520 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
LINC01558-202ENST00000495520 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
LINC01558-202ENST00000495520 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
LINC01558-202ENST00000495520 PRO0628Q9UI54 55 aa10.32□□□□□ -0.76
LINC01558-202ENST00000495520 PSPHP1O15172 72 aa10.23□□□□□ -0.77
LINC01558-202ENST00000495520 MUC17Q685J3 4493 aa10.22□□□□□ -0.77
LINC01558-202ENST00000495520 Q5VV11 94 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms