RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 ZFYVE26Q68DK2 2539 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 APC2O95996 2303 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 SPRR2DP22532 72 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 DEFB110Q30KQ9 67 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 RPL39LQ96EH5 51 aaKnown RBP0.57□□□□□ -2.32
SRRM1-218ENST00000494934 AKAP13Q12802 2813 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 HECTD1Q9ULT8 2610 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 CREBBPQ92793 2442 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
SRRM1-218ENST00000494934 SPART-AS1P0CW21 52 aa0.56□□□□□ -2.32
SRRM1-218ENST00000494934 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
SRRM1-218ENST00000494934 TNRC18O15417 2968 aaPredicted RBP0.55□□□□□ -2.32
SRRM1-218ENST00000494934 SPRR2BP35325 72 aa0.55□□□□□ -2.32
SRRM1-218ENST00000494934 ARHGAP5-AS1Q96IT6 56 aa0.55□□□□□ -2.32
SRRM1-218ENST00000494934 ACANP16112 2415 aa0.55□□□□□ -2.32
SRRM1-218ENST00000494934 SRRM2Q9UQ35 2752 aaKnown RBP0.54□□□□□ -2.32
SRRM1-218ENST00000494934 UBR5O95071 2799 aaPredicted RBP0.54□□□□□ -2.32
SRRM1-218ENST00000494934 LINC01590Q5TEZ4 76 aa0.53□□□□□ -2.32
SRRM1-218ENST00000494934 TNXBP22105 4242 aa0.52□□□□□ -2.33
SRRM1-218ENST00000494934 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
SRRM1-218ENST00000494934 NCOR2Q9Y618 2525 aa0.52□□□□□ -2.33
SRRM1-218ENST00000494934 LEAP2Q969E1 77 aa0.51□□□□□ -2.33
SRRM1-218ENST00000494934 COL6A5A8TX70 2615 aa0.51□□□□□ -2.33
SRRM1-218ENST00000494934 MTORP42345 2549 aa0.49□□□□□ -2.33
SRRM1-218ENST00000494934 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
SRRM1-218ENST00000494934 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
SRRM1-218ENST00000494934 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
SRRM1-218ENST00000494934 LYSTQ99698 3801 aa0.49□□□□□ -2.33
SRRM1-218ENST00000494934 MAP1BP46821 2468 aaKnown RBP0.48□□□□□ -2.33
SRRM1-218ENST00000494934 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
SRRM1-218ENST00000494934 SPRR2AP35326 72 aa0.48□□□□□ -2.33
SRRM1-218ENST00000494934 NF1P21359 2839 aa0.48□□□□□ -2.33
SRRM1-218ENST00000494934 ACACAQ13085 2346 aa0.48□□□□□ -2.33
SRRM1-218ENST00000494934 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
SRRM1-218ENST00000494934 SPTBN4Q9H254 2564 aa0.48□□□□□ -2.33
SRRM1-218ENST00000494934 ZZEF1O43149 2961 aa0.47□□□□□ -2.33
SRRM1-218ENST00000494934 PRCDQ00LT1 54 aa0.47□□□□□ -2.33
SRRM1-218ENST00000494934 LPAP08519 4548 aa0.46□□□□□ -2.34
SRRM1-218ENST00000494934 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
SRRM1-218ENST00000494934 KMT2AQ03164 3969 aa0.45□□□□□ -2.34
SRRM1-218ENST00000494934 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
SRRM1-218ENST00000494934 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
SRRM1-218ENST00000494934 MAST4O15021 2626 aa0.44□□□□□ -2.34
SRRM1-218ENST00000494934 MT1AP04731 61 aa0.44□□□□□ -2.34
SRRM1-218ENST00000494934 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
SRRM1-218ENST00000494934 DCHS2Q6V1P9 2916 aa0.43□□□□□ -2.34
SRRM1-218ENST00000494934 HRNRQ86YZ3 2850 aaPredicted RBP0.43□□□□□ -2.34
SRRM1-218ENST00000494934 FRYQ5TBA9 3013 aa0.43□□□□□ -2.34
SRRM1-218ENST00000494934 GCN1Q92616 2671 aaKnown RBP0.42□□□□□ -2.34
SRRM1-218ENST00000494934 COL7A1Q02388 2944 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 FLNCQ14315 2725 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 DNAH3Q8TD57 4116 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 SPG11Q96JI7 2443 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 PDZD2O15018 2839 aa0.42□□□□□ -2.34
SRRM1-218ENST00000494934 FAM186AA6NE01 2351 aa0.41□□□□□ -2.34
SRRM1-218ENST00000494934 SONP18583 2426 aaKnown RBP0.41□□□□□ -2.34
SRRM1-218ENST00000494934 DMBT1Q9UGM3 2413 aaPredicted RBP0.41□□□□□ -2.34
SRRM1-218ENST00000494934 K7EIM0 57 aa0.41□□□□□ -2.34
SRRM1-218ENST00000494934 RHPN1-AS1Q9BWJ2 59 aa0.41□□□□□ -2.34
SRRM1-218ENST00000494934 LRRK2Q5S007 2527 aa0.41□□□□□ -2.34
SRRM1-218ENST00000494934 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
SRRM1-218ENST00000494934 SETD2Q9BYW2 2564 aaPredicted RBP0.4□□□□□ -2.35
SRRM1-218ENST00000494934 KRTAP8-1Q8IUC2 63 aa0.4□□□□□ -2.35
SRRM1-218ENST00000494934 SPENQ96T58 3664 aaKnown RBP0.4□□□□□ -2.35
SRRM1-218ENST00000494934 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.35
SRRM1-218ENST00000494934 NSD1Q96L73 2696 aaPredicted RBP0.4□□□□□ -2.35
SRRM1-218ENST00000494934 PKD1P98161 4303 aa0.4□□□□□ -2.35
SRRM1-218ENST00000494934 CUBNO60494 3623 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 PKHD1L1Q86WI1 4243 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 ANKRD11Q6UB99 2663 aaPredicted RBP0.39□□□□□ -2.35
SRRM1-218ENST00000494934 TTTY10Q9BZA0 68 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 COL12A1Q99715 3063 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 HTTP42858 3142 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 NBEAL2Q6ZNJ1 2754 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 CHD7Q9P2D1 2997 aa0.39□□□□□ -2.35
SRRM1-218ENST00000494934 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
SRRM1-218ENST00000494934 ANK3Q12955 4377 aaKnown RBP0.38□□□□□ -2.35
SRRM1-218ENST00000494934 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
SRRM1-218ENST00000494934 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
SRRM1-218ENST00000494934 SPRR2EP22531 72 aa0.38□□□□□ -2.35
SRRM1-218ENST00000494934 TACC2O95359 2948 aa0.38□□□□□ -2.35
SRRM1-218ENST00000494934 HECTD4Q9Y4D8 3996 aa0.38□□□□□ -2.35
SRRM1-218ENST00000494934 RANBP2P49792 3224 aaKnown RBP0.38□□□□□ -2.35
SRRM1-218ENST00000494934 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
SRRM1-218ENST00000494934 ACACBO00763 2458 aa0.37□□□□□ -2.35
SRRM1-218ENST00000494934 NBEAQ8NFP9 2946 aa0.37□□□□□ -2.35
SRRM1-218ENST00000494934 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
SRRM1-218ENST00000494934 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
SRRM1-218ENST00000494934 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
SRRM1-218ENST00000494934 TGP01266 2768 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 DNAH11Q96DT5 4516 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 DNAH2Q9P225 4427 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 H3BUX3 64 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 UTP20O75691 2785 aaKnown RBP0.36□□□□□ -2.35
SRRM1-218ENST00000494934 HSPG2P98160 4391 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 VPS13DQ5THJ4 4388 aa0.36□□□□□ -2.35
SRRM1-218ENST00000494934 LRP1BQ9NZR2 4599 aa0.35□□□□□ -2.35
SRRM1-218ENST00000494934 COL6A3P12111 3177 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms