RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 TNP1P09430 55 aa0.55□□□□□ -2.32
CLHC1-213ENST00000494539 SETD2Q9BYW2 2564 aaPredicted RBP0.55□□□□□ -2.32
CLHC1-213ENST00000494539 ZFYVE26Q68DK2 2539 aa0.55□□□□□ -2.32
CLHC1-213ENST00000494539 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
CLHC1-213ENST00000494539 APC2O95996 2303 aa0.54□□□□□ -2.32
CLHC1-213ENST00000494539 NCOR1O75376 2440 aa0.54□□□□□ -2.32
CLHC1-213ENST00000494539 M0R2T5 61 aa0.54□□□□□ -2.32
CLHC1-213ENST00000494539 RHPN1-AS1Q9BWJ2 59 aa0.54□□□□□ -2.32
CLHC1-213ENST00000494539 CHD7Q9P2D1 2997 aa0.54□□□□□ -2.32
CLHC1-213ENST00000494539 NBASA2RRP1 2371 aa0.53□□□□□ -2.32
CLHC1-213ENST00000494539 CEP250Q9BV73 2442 aa0.53□□□□□ -2.32
CLHC1-213ENST00000494539 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.32
CLHC1-213ENST00000494539 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
CLHC1-213ENST00000494539 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
CLHC1-213ENST00000494539 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
CLHC1-213ENST00000494539 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
CLHC1-213ENST00000494539 U3KQA8 63 aa0.52□□□□□ -2.33
CLHC1-213ENST00000494539 CHD8Q9HCK8 2581 aa0.52□□□□□ -2.33
CLHC1-213ENST00000494539 MGAQ8IWI9 3026 aa0.52□□□□□ -2.33
CLHC1-213ENST00000494539 FAM186AA6NE01 2351 aa0.52□□□□□ -2.33
CLHC1-213ENST00000494539 TENM2Q9NT68 2774 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 SPART-AS1P0CW21 52 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 APELAP0DMC3 54 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 MAP1BP46821 2468 aaKnown RBP0.51□□□□□ -2.33
CLHC1-213ENST00000494539 DEFB124Q8NES8 71 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 COX14Q96I36 57 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 CELSR1Q9NYQ6 3014 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
CLHC1-213ENST00000494539 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 VPS13DQ5THJ4 4388 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 AKAP13Q12802 2813 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 Q9Y3F1 56 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 HIVEP3Q5T1R4 2406 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 NBPF19A0A087WUL8 3843 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
CLHC1-213ENST00000494539 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
CLHC1-213ENST00000494539 DNAH11Q96DT5 4516 aa0.49□□□□□ -2.33
CLHC1-213ENST00000494539 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
CLHC1-213ENST00000494539 HTN1P15515 57 aa0.49□□□□□ -2.33
CLHC1-213ENST00000494539 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
CLHC1-213ENST00000494539 TNRC18O15417 2968 aaPredicted RBP0.48□□□□□ -2.33
CLHC1-213ENST00000494539 STATHP02808 62 aa0.48□□□□□ -2.33
CLHC1-213ENST00000494539 DEFB1P60022 68 aa0.48□□□□□ -2.33
CLHC1-213ENST00000494539 NCOR2Q9Y618 2525 aa0.48□□□□□ -2.33
CLHC1-213ENST00000494539 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
CLHC1-213ENST00000494539 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
CLHC1-213ENST00000494539 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 MTORP42345 2549 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 FRYQ5TBA9 3013 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 H3BNG1 76 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 DNAH3Q8TD57 4116 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 CRYBG3Q68DQ2 2970 aa0.47□□□□□ -2.33
CLHC1-213ENST00000494539 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 COL12A1Q99715 3063 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 ZFHX4Q86UP3 3567 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 A0A096LNI7 61 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 RPS29P62273 56 aaKnown RBP0.46□□□□□ -2.34
CLHC1-213ENST00000494539 DEFB136Q30KP8 78 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 RANBP2P49792 3224 aaKnown RBP0.46□□□□□ -2.34
CLHC1-213ENST00000494539 LYSTQ99698 3801 aa0.46□□□□□ -2.34
CLHC1-213ENST00000494539 SACSQ9NZJ4 4579 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 LINC01556Q5JQF7 62 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 TNXBP22105 4242 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 FLNCQ14315 2725 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 DYNC2H1Q8NCM8 4307 aaKnown RBP0.45□□□□□ -2.34
CLHC1-213ENST00000494539 ACANP16112 2415 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 MYCBP2O75592 4640 aa0.45□□□□□ -2.34
CLHC1-213ENST00000494539 DNAH7Q8WXX0 4024 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 USP9YO00507 2555 aaPredicted RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 SPENQ96T58 3664 aaKnown RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 DEFB108BQ8NET1 73 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 CACNA1AO00555 2505 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 SZT2Q5T011 3432 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 SETXQ7Z333 2677 aaKnown RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 FRYLO94915 3013 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 NF1P21359 2839 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
CLHC1-213ENST00000494539 SPG11Q96JI7 2443 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 DCHS2Q6V1P9 2916 aa0.44□□□□□ -2.34
CLHC1-213ENST00000494539 PKHD1L1Q86WI1 4243 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 LAMA5O15230 3695 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 DNAH8Q96JB1 4490 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 RELNP78509 3460 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 ZZEF1O43149 2961 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 PRM1P04553 51 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 DEFB133Q30KQ1 61 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 COL6A3P12111 3177 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 ANKHD1Q8IWZ3 2542 aaKnown RBP0.43□□□□□ -2.34
CLHC1-213ENST00000494539 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
CLHC1-213ENST00000494539 UTP20O75691 2785 aaKnown RBP0.43□□□□□ -2.34
CLHC1-213ENST00000494539 CFAP54Q96N23 3096 aa0.43□□□□□ -2.34
CLHC1-213ENST00000494539 DNAH2Q9P225 4427 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms