RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 A0A096LNI7 61 aa0.41□□□□□ -2.34
SSB-212ENST00000494051 RPL39P5Q59GN2 51 aa0.41□□□□□ -2.34
SSB-212ENST00000494051 ANK2Q01484 3957 aa0.41□□□□□ -2.34
SSB-212ENST00000494051 TNRC18O15417 2968 aaPredicted RBP0.41□□□□□ -2.34
SSB-212ENST00000494051 DEFB108AA8MXU0 73 aa0.4□□□□□ -2.35
SSB-212ENST00000494051 PKD1L2Q7Z442 2459 aa0.4□□□□□ -2.35
SSB-212ENST00000494051 NCOR1O75376 2440 aa0.39□□□□□ -2.35
SSB-212ENST00000494051 SPRR2AP35326 72 aa0.39□□□□□ -2.35
SSB-212ENST00000494051 APCP25054 2843 aa0.39□□□□□ -2.35
SSB-212ENST00000494051 OTOGQ6ZRI0 2925 aa0.39□□□□□ -2.35
SSB-212ENST00000494051 A0A0C4DFX4 3053 aa0.39□□□□□ -2.35
SSB-212ENST00000494051 H3BUX3 64 aa0.38□□□□□ -2.35
SSB-212ENST00000494051 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
SSB-212ENST00000494051 KRTAP8-1Q8IUC2 63 aa0.38□□□□□ -2.35
SSB-212ENST00000494051 BSNQ9UPA5 3926 aa0.38□□□□□ -2.35
SSB-212ENST00000494051 CHD6Q8TD26 2715 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 ATRQ13535 2644 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 HECTD1Q9ULT8 2610 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 CEP290O15078 2479 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 HTN1P15515 57 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
SSB-212ENST00000494051 UBR5O95071 2799 aaPredicted RBP0.36□□□□□ -2.35
SSB-212ENST00000494051 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
SSB-212ENST00000494051 MT1AP04731 61 aa0.36□□□□□ -2.35
SSB-212ENST00000494051 CREBBPQ92793 2442 aa0.36□□□□□ -2.35
SSB-212ENST00000494051 SPTA1P02549 2419 aa0.35□□□□□ -2.35
SSB-212ENST00000494051 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
SSB-212ENST00000494051 DEFB1P60022 68 aa0.35□□□□□ -2.35
SSB-212ENST00000494051 ACANP16112 2415 aa0.35□□□□□ -2.35
SSB-212ENST00000494051 HUWE1Q7Z6Z7 4374 aaKnown RBP0.35□□□□□ -2.35
SSB-212ENST00000494051 PRKDCP78527 4128 aaKnown RBP0.35□□□□□ -2.35
SSB-212ENST00000494051 COL6A5A8TX70 2615 aa0.34□□□□□ -2.35
SSB-212ENST00000494051 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
SSB-212ENST00000494051 SPTBN4Q9H254 2564 aa0.34□□□□□ -2.35
SSB-212ENST00000494051 DEFB136Q30KP8 78 aa0.34□□□□□ -2.36
SSB-212ENST00000494051 SACSQ9NZJ4 4579 aa0.34□□□□□ -2.36
SSB-212ENST00000494051 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
SSB-212ENST00000494051 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.36
SSB-212ENST00000494051 LYSTQ99698 3801 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 CHD8Q9HCK8 2581 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 SMR3BP02814 79 aaPredicted RBP0.33□□□□□ -2.36
SSB-212ENST00000494051 APELAP0DMC3 54 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 SPRR2EP22531 72 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 LPAP08519 4548 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
SSB-212ENST00000494051 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
SSB-212ENST00000494051 SRRM2Q9UQ35 2752 aaKnown RBP0.32□□□□□ -2.36
SSB-212ENST00000494051 KMT2AQ03164 3969 aa0.32□□□□□ -2.36
SSB-212ENST00000494051 SPRR2FQ96RM1 72 aa0.32□□□□□ -2.36
SSB-212ENST00000494051 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
SSB-212ENST00000494051 STAB1Q9NY15 2570 aa0.31□□□□□ -2.36
SSB-212ENST00000494051 VPS13BQ7Z7G8 4022 aa0.31□□□□□ -2.36
SSB-212ENST00000494051 DEFB133Q30KQ1 61 aa0.31□□□□□ -2.36
SSB-212ENST00000494051 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
SSB-212ENST00000494051 VPS13DQ5THJ4 4388 aa0.3□□□□□ -2.36
SSB-212ENST00000494051 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
SSB-212ENST00000494051 NBASA2RRP1 2371 aa0.3□□□□□ -2.36
SSB-212ENST00000494051 ANK3Q12955 4377 aaKnown RBP0.29□□□□□ -2.36
SSB-212ENST00000494051 APC2O95996 2303 aa0.29□□□□□ -2.36
SSB-212ENST00000494051 TRIOO75962 3097 aa0.29□□□□□ -2.36
SSB-212ENST00000494051 DEFB124Q8NES8 71 aa0.29□□□□□ -2.36
SSB-212ENST00000494051 PDZD2O15018 2839 aa0.29□□□□□ -2.36
SSB-212ENST00000494051 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
SSB-212ENST00000494051 GCN1Q92616 2671 aaKnown RBP0.29□□□□□ -2.36
SSB-212ENST00000494051 SONP18583 2426 aaKnown RBP0.28□□□□□ -2.36
SSB-212ENST00000494051 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
SSB-212ENST00000494051 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
SSB-212ENST00000494051 MTORP42345 2549 aa0.28□□□□□ -2.36
SSB-212ENST00000494051 CUBNO60494 3623 aa0.28□□□□□ -2.36
SSB-212ENST00000494051 KRTAP19-5Q3LI72 72 aa0.28□□□□□ -2.36
SSB-212ENST00000494051 SYNE2Q8WXH0 6885 aaKnown RBP0.28□□□□□ -2.36
SSB-212ENST00000494051 HSPG2P98160 4391 aa0.28□□□□□ -2.37
SSB-212ENST00000494051 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.37
SSB-212ENST00000494051 PKD1P98161 4303 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 LRP1BQ9NZR2 4599 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 NAV2Q8IVL1 2488 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 NF1P21359 2839 aa0.27□□□□□ -2.37
SSB-212ENST00000494051 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
SSB-212ENST00000494051 SETXQ7Z333 2677 aaKnown RBP0.26□□□□□ -2.37
SSB-212ENST00000494051 DNAH3Q8TD57 4116 aa0.26□□□□□ -2.37
SSB-212ENST00000494051 ACACAQ13085 2346 aa0.26□□□□□ -2.37
SSB-212ENST00000494051 FLNBO75369 2602 aaKnown RBP0.26□□□□□ -2.37
SSB-212ENST00000494051 RANBP2P49792 3224 aaKnown RBP0.26□□□□□ -2.37
SSB-212ENST00000494051 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 CHD7Q9P2D1 2997 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 CCDC168Q8NDH2 2452 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 KMT2DO14686 5537 aa0.25□□□□□ -2.37
SSB-212ENST00000494051 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
SSB-212ENST00000494051 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
SSB-212ENST00000494051 CD52P31358 61 aa0.24□□□□□ -2.37
SSB-212ENST00000494051 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
SSB-212ENST00000494051 TENM2Q9NT68 2774 aa0.24□□□□□ -2.37
SSB-212ENST00000494051 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms