RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 ITPR2Q14571 2701 aa12.33□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 RELNP78509 3460 aa12.33□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 FBN2P35556 2912 aa12.32□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 LAMA5O15230 3695 aa12.31□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 DCHS2Q6V1P9 2916 aa12.29□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
CHKB-CPT1B-203ENST00000492556 NSD1Q96L73 2696 aaPredicted RBP12.27□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 H3BS24 57 aa12.27□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 NF1P21359 2839 aa12.24□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 HIVEP1P15822 2718 aa12.24□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 CRYBG3Q68DQ2 2970 aa12.23□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
CHKB-CPT1B-203ENST00000492556 DMBT1Q9UGM3 2413 aaPredicted RBP12.2□□□□□ -0.46
CHKB-CPT1B-203ENST00000492556 MXRA5Q9NR99 2828 aa12.18□□□□□ -0.46
CHKB-CPT1B-203ENST00000492556 SMG1Q96Q15 3661 aaKnown RBP12.17□□□□□ -0.46
CHKB-CPT1B-203ENST00000492556 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
CHKB-CPT1B-203ENST00000492556 Q6ZSA8 131 aa12.16□□□□□ -0.46
CHKB-CPT1B-203ENST00000492556 KRTAP10-2P60368 255 aa12.14□□□□□ -0.47
CHKB-CPT1B-203ENST00000492556 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
CHKB-CPT1B-203ENST00000492556 H1FX-AS1Q4G0G2 97 aa12.12□□□□□ -0.47
CHKB-CPT1B-203ENST00000492556 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
CHKB-CPT1B-203ENST00000492556 CSMD1Q96PZ7 3565 aa12.08□□□□□ -0.48
CHKB-CPT1B-203ENST00000492556 ADM2Q7Z4H4 148 aa12.07□□□□□ -0.48
CHKB-CPT1B-203ENST00000492556 M0R2T5 61 aa12□□□□□ -0.49
CHKB-CPT1B-203ENST00000492556 RPL37P61927 97 aaKnown RBP12□□□□□ -0.49
CHKB-CPT1B-203ENST00000492556 ROMO1P60602 79 aa11.99□□□□□ -0.49
CHKB-CPT1B-203ENST00000492556 S4R3F8 94 aa11.98□□□□□ -0.49
CHKB-CPT1B-203ENST00000492556 KRTAP13-2Q52LG2 175 aa11.94□□□□□ -0.5
CHKB-CPT1B-203ENST00000492556 CAMK2N1Q7Z7J9 78 aa11.92□□□□□ -0.5
CHKB-CPT1B-203ENST00000492556 KRTAP25-1Q3LHN0 102 aa11.87□□□□□ -0.51
CHKB-CPT1B-203ENST00000492556 CELSR1Q9NYQ6 3014 aa11.87□□□□□ -0.51
CHKB-CPT1B-203ENST00000492556 RPS29P62273 56 aaKnown RBP11.82□□□□□ -0.52
CHKB-CPT1B-203ENST00000492556 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
CHKB-CPT1B-203ENST00000492556 LUZP6Q538Z0 58 aa11.75□□□□□ -0.53
CHKB-CPT1B-203ENST00000492556 SEC61BP60468 96 aaKnown RBP11.71□□□□□ -0.53
CHKB-CPT1B-203ENST00000492556 TENM3Q9P273 2699 aa11.67□□□□□ -0.54
CHKB-CPT1B-203ENST00000492556 Q5VSD8 79 aa11.66□□□□□ -0.54
CHKB-CPT1B-203ENST00000492556 SPENQ96T58 3664 aaKnown RBP11.6□□□□□ -0.55
CHKB-CPT1B-203ENST00000492556 R4GN34 69 aa11.58□□□□□ -0.56
CHKB-CPT1B-203ENST00000492556 BSNQ9UPA5 3926 aa11.58□□□□□ -0.56
CHKB-CPT1B-203ENST00000492556 A8MUU9 505 aa11.53□□□□□ -0.56
CHKB-CPT1B-203ENST00000492556 KRTAP13-3Q3SY46 172 aa11.53□□□□□ -0.56
CHKB-CPT1B-203ENST00000492556 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 C20orf166-AS1Q96NR2 134 aa11.5□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 PDZD2O15018 2839 aa11.49□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 TENM1Q9UKZ4 2725 aa11.46□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 M0QZ58 72 aa11.46□□□□□ -0.57
CHKB-CPT1B-203ENST00000492556 H0YAA0 97 aa11.43□□□□□ -0.58
CHKB-CPT1B-203ENST00000492556 VWFP04275 2813 aa11.42□□□□□ -0.58
CHKB-CPT1B-203ENST00000492556 TENM4Q6N022 2769 aa11.39□□□□□ -0.59
CHKB-CPT1B-203ENST00000492556 A0A0A0MQY5 61 aa11.31□□□□□ -0.6
CHKB-CPT1B-203ENST00000492556 CUBNO60494 3623 aa11.3□□□□□ -0.6
CHKB-CPT1B-203ENST00000492556 TGP01266 2768 aa11.26□□□□□ -0.61
CHKB-CPT1B-203ENST00000492556 NDUFAF8A1L188 74 aa11.26□□□□□ -0.61
CHKB-CPT1B-203ENST00000492556 PLAC4Q8WY50 150 aa11.21□□□□□ -0.61
CHKB-CPT1B-203ENST00000492556 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
CHKB-CPT1B-203ENST00000492556 NBPF19A0A087WUL8 3843 aa11.19□□□□□ -0.62
CHKB-CPT1B-203ENST00000492556 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
CHKB-CPT1B-203ENST00000492556 ANK3Q12955 4377 aaKnown RBP11.1□□□□□ -0.63
CHKB-CPT1B-203ENST00000492556 PKD1L1Q8TDX9 2849 aa11.09□□□□□ -0.63
CHKB-CPT1B-203ENST00000492556 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
CHKB-CPT1B-203ENST00000492556 C10orf95Q9H7T3 257 aa11.07□□□□□ -0.64
CHKB-CPT1B-203ENST00000492556 XP32Q5T750 250 aa10.95□□□□□ -0.66
CHKB-CPT1B-203ENST00000492556 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
CHKB-CPT1B-203ENST00000492556 KRTAP21-3Q3LHN1 58 aa10.88□□□□□ -0.67
CHKB-CPT1B-203ENST00000492556 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
CHKB-CPT1B-203ENST00000492556 SRRM2Q9UQ35 2752 aaKnown RBP10.84□□□□□ -0.67
CHKB-CPT1B-203ENST00000492556 P0C880 135 aa10.84□□□□□ -0.67
CHKB-CPT1B-203ENST00000492556 ZFHX3Q15911 3703 aa10.77□□□□□ -0.68
CHKB-CPT1B-203ENST00000492556 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
CHKB-CPT1B-203ENST00000492556 KRTAP3-1Q9BYR8 98 aa10.76□□□□□ -0.69
CHKB-CPT1B-203ENST00000492556 PP632Q6XCG6 107 aa10.67□□□□□ -0.7
CHKB-CPT1B-203ENST00000492556 FBN3Q75N90 2809 aa10.63□□□□□ -0.71
CHKB-CPT1B-203ENST00000492556 TNP1P09430 55 aa10.62□□□□□ -0.71
CHKB-CPT1B-203ENST00000492556 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
CHKB-CPT1B-203ENST00000492556 KRTAP12-2P59991 146 aa10.58□□□□□ -0.72
CHKB-CPT1B-203ENST00000492556 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
CHKB-CPT1B-203ENST00000492556 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
CHKB-CPT1B-203ENST00000492556 AKAP9Q99996 3911 aa10.5□□□□□ -0.73
CHKB-CPT1B-203ENST00000492556 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
CHKB-CPT1B-203ENST00000492556 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
CHKB-CPT1B-203ENST00000492556 KRTAP12-1P59990 96 aa10.45□□□□□ -0.74
CHKB-CPT1B-203ENST00000492556 KRTAP10-6P60371 365 aaPredicted RBP10.45□□□□□ -0.74
CHKB-CPT1B-203ENST00000492556 KRTAP13-4Q3LI77 160 aa10.42□□□□□ -0.74
CHKB-CPT1B-203ENST00000492556 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
CHKB-CPT1B-203ENST00000492556 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
CHKB-CPT1B-203ENST00000492556 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
CHKB-CPT1B-203ENST00000492556 COL7A1Q02388 2944 aa10.1□□□□□ -0.79
CHKB-CPT1B-203ENST00000492556 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
CHKB-CPT1B-203ENST00000492556 KRTAP15-1Q3LI76 137 aa10.08□□□□□ -0.8
CHKB-CPT1B-203ENST00000492556 CSMD3Q7Z407 3707 aa10.03□□□□□ -0.8
CHKB-CPT1B-203ENST00000492556 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.82
CHKB-CPT1B-203ENST00000492556 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
CHKB-CPT1B-203ENST00000492556 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
CHKB-CPT1B-203ENST00000492556 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
CHKB-CPT1B-203ENST00000492556 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
CHKB-CPT1B-203ENST00000492556 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
CHKB-CPT1B-203ENST00000492556 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms