RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 SRRM2Q9UQ35 2752 aaKnown RBP0.61□□□□□ -2.31
LINC02049-201ENST00000490647 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
LINC02049-201ENST00000490647 M0QY20 66 aa0.61□□□□□ -2.31
LINC02049-201ENST00000490647 A0A0C4DFX4 3053 aa0.61□□□□□ -2.31
LINC02049-201ENST00000490647 PDZD2O15018 2839 aa0.6□□□□□ -2.31
LINC02049-201ENST00000490647 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
LINC02049-201ENST00000490647 SPRR2DP22532 72 aa0.6□□□□□ -2.31
LINC02049-201ENST00000490647 APC2O95996 2303 aa0.6□□□□□ -2.31
LINC02049-201ENST00000490647 NF1P21359 2839 aa0.59□□□□□ -2.31
LINC02049-201ENST00000490647 CACNA1AO00555 2505 aa0.58□□□□□ -2.32
LINC02049-201ENST00000490647 VPS13BQ7Z7G8 4022 aa0.58□□□□□ -2.32
LINC02049-201ENST00000490647 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
LINC02049-201ENST00000490647 SNRPGP62308 76 aaKnown RBP0.57□□□□□ -2.32
LINC02049-201ENST00000490647 HRNRQ86YZ3 2850 aaPredicted RBP0.57□□□□□ -2.32
LINC02049-201ENST00000490647 GCN1Q92616 2671 aaKnown RBP0.57□□□□□ -2.32
LINC02049-201ENST00000490647 ZZEF1O43149 2961 aa0.56□□□□□ -2.32
LINC02049-201ENST00000490647 LPAP08519 4548 aa0.56□□□□□ -2.32
LINC02049-201ENST00000490647 IGSF10Q6WRI0 2623 aa0.55□□□□□ -2.32
LINC02049-201ENST00000490647 FLNCQ14315 2725 aa0.55□□□□□ -2.32
LINC02049-201ENST00000490647 DUOX1Q9NRD9 1551 aa0.55□□□□□ -2.32
LINC02049-201ENST00000490647 MROH2BQ7Z745 1585 aa0.54□□□□□ -2.32
LINC02049-201ENST00000490647 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
LINC02049-201ENST00000490647 FLNBO75369 2602 aaKnown RBP0.53□□□□□ -2.32
LINC02049-201ENST00000490647 DCHS2Q6V1P9 2916 aa0.53□□□□□ -2.32
LINC02049-201ENST00000490647 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
LINC02049-201ENST00000490647 A8MTW9 85 aa0.52□□□□□ -2.33
LINC02049-201ENST00000490647 POLR2KP53803 58 aaKnown RBP0.52□□□□□ -2.33
LINC02049-201ENST00000490647 PKD1P98161 4303 aa0.52□□□□□ -2.33
LINC02049-201ENST00000490647 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
LINC02049-201ENST00000490647 SPRR2BP35325 72 aa0.51□□□□□ -2.33
LINC02049-201ENST00000490647 GCC2Q8IWJ2 1684 aa0.5□□□□□ -2.33
LINC02049-201ENST00000490647 SACSQ9NZJ4 4579 aa0.5□□□□□ -2.33
LINC02049-201ENST00000490647 COL7A1Q02388 2944 aa0.5□□□□□ -2.33
LINC02049-201ENST00000490647 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
LINC02049-201ENST00000490647 HECTD4Q9Y4D8 3996 aa0.5□□□□□ -2.33
LINC02049-201ENST00000490647 CUBNO60494 3623 aa0.49□□□□□ -2.33
LINC02049-201ENST00000490647 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
LINC02049-201ENST00000490647 MAST4O15021 2626 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 M0QZ58 72 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 TNP1P09430 55 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 RPL39P62891 51 aaKnown RBP0.48□□□□□ -2.33
LINC02049-201ENST00000490647 CLPSL2Q6UWE3 100 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 TACC2O95359 2948 aa0.48□□□□□ -2.33
LINC02049-201ENST00000490647 MTORP42345 2549 aa0.47□□□□□ -2.33
LINC02049-201ENST00000490647 HSPG2P98160 4391 aa0.47□□□□□ -2.33
LINC02049-201ENST00000490647 DNAH11Q96DT5 4516 aa0.46□□□□□ -2.34
LINC02049-201ENST00000490647 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
LINC02049-201ENST00000490647 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
LINC02049-201ENST00000490647 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
LINC02049-201ENST00000490647 LRRK2Q5S007 2527 aa0.46□□□□□ -2.34
LINC02049-201ENST00000490647 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
LINC02049-201ENST00000490647 ACACAQ13085 2346 aa0.44□□□□□ -2.34
LINC02049-201ENST00000490647 COL6A5A8TX70 2615 aa0.44□□□□□ -2.34
LINC02049-201ENST00000490647 SONP18583 2426 aaKnown RBP0.44□□□□□ -2.34
LINC02049-201ENST00000490647 KALRNO60229 2985 aa0.44□□□□□ -2.34
LINC02049-201ENST00000490647 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
LINC02049-201ENST00000490647 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
LINC02049-201ENST00000490647 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
LINC02049-201ENST00000490647 HMCN2Q8NDA2 5059 aa0.43□□□□□ -2.34
LINC02049-201ENST00000490647 ANKHD1Q8IWZ3 2542 aaKnown RBP0.43□□□□□ -2.34
LINC02049-201ENST00000490647 DMBT1Q9UGM3 2413 aaPredicted RBP0.43□□□□□ -2.34
LINC02049-201ENST00000490647 RPL39LQ96EH5 51 aaKnown RBP0.43□□□□□ -2.34
LINC02049-201ENST00000490647 COL6A3P12111 3177 aa0.43□□□□□ -2.34
LINC02049-201ENST00000490647 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
LINC02049-201ENST00000490647 SPENQ96T58 3664 aaKnown RBP0.42□□□□□ -2.34
LINC02049-201ENST00000490647 FLGP20930 4061 aaPredicted RBP0.42□□□□□ -2.34
LINC02049-201ENST00000490647 DNAH9Q9NYC9 4486 aa0.42□□□□□ -2.34
LINC02049-201ENST00000490647 RANBP2P49792 3224 aaKnown RBP0.42□□□□□ -2.34
LINC02049-201ENST00000490647 ANK3Q12955 4377 aaKnown RBP0.41□□□□□ -2.34
LINC02049-201ENST00000490647 SPG11Q96JI7 2443 aa0.41□□□□□ -2.34
LINC02049-201ENST00000490647 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
LINC02049-201ENST00000490647 RIF1Q5UIP0 2472 aaKnown RBP0.41□□□□□ -2.34
LINC02049-201ENST00000490647 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
LINC02049-201ENST00000490647 PKHD1P08F94 4074 aa0.4□□□□□ -2.34
LINC02049-201ENST00000490647 DNAH2Q9P225 4427 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 SPRR2AP35326 72 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 TOMM7Q9P0U1 55 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 NBEAL2Q6ZNJ1 2754 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
LINC02049-201ENST00000490647 MAP1AP78559 2803 aaPredicted RBP0.4□□□□□ -2.35
LINC02049-201ENST00000490647 HTTP42858 3142 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 TENM2Q9NT68 2774 aa0.4□□□□□ -2.35
LINC02049-201ENST00000490647 LEAP2Q969E1 77 aa0.39□□□□□ -2.35
LINC02049-201ENST00000490647 AKAP9Q99996 3911 aa0.39□□□□□ -2.35
LINC02049-201ENST00000490647 FASNP49327 2511 aaKnown RBP0.38□□□□□ -2.35
LINC02049-201ENST00000490647 SVEP1Q4LDE5 3571 aa0.38□□□□□ -2.35
LINC02049-201ENST00000490647 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
LINC02049-201ENST00000490647 COL12A1Q99715 3063 aa0.37□□□□□ -2.35
LINC02049-201ENST00000490647 NBEAQ8NFP9 2946 aa0.37□□□□□ -2.35
LINC02049-201ENST00000490647 ACACBO00763 2458 aa0.37□□□□□ -2.35
LINC02049-201ENST00000490647 APOBP04114 4563 aaKnown RBP0.37□□□□□ -2.35
LINC02049-201ENST00000490647 FAM186AA6NE01 2351 aa0.36□□□□□ -2.35
LINC02049-201ENST00000490647 DYNC2H1Q8NCM8 4307 aaKnown RBP0.36□□□□□ -2.35
LINC02049-201ENST00000490647 EPG5Q9HCE0 2579 aa0.36□□□□□ -2.35
LINC02049-201ENST00000490647 CHD7Q9P2D1 2997 aa0.36□□□□□ -2.35
LINC02049-201ENST00000490647 SPART-AS1P0CW21 52 aa0.35□□□□□ -2.35
LINC02049-201ENST00000490647 TEP1Q99973 2627 aaKnown RBP0.35□□□□□ -2.35
LINC02049-201ENST00000490647 DNAH6Q9C0G6 4158 aa0.35□□□□□ -2.35
LINC02049-201ENST00000490647 CCDC168Q8NDH2 2452 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms