RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 H3BPC8 53 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 PRB2P02812 416 aaPredicted RBP1.8□□□□□ -2.12
PKP4-212ENST00000483881 LY6EQ16553 131 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 PRR9Q5T870 116 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 C5orf56Q8N8D9 126 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 SPRR4Q96PI1 79 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 HIGD2AQ9BW72 106 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 CNFNQ9BYD5 112 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 ORMDL1Q9P0S3 153 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
PKP4-212ENST00000483881 NDUFB1O75438 58 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 PPP1R17O96001 155 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 PDE6GP18545 87 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 DEFB114Q30KQ6 69 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 SPAG11AQ6PDA7 123 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 BRD3OSQ6XYD6 125 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 DEFB104AQ8WTQ1 72 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 LINC00208Q96KT6 92 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 SMR3AQ99954 134 aa1.79□□□□□ -2.12
PKP4-212ENST00000483881 WNK2Q9Y3S1 2297 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.12
PKP4-212ENST00000483881 IGKV3-7A0A075B6H7 116 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 LOC110117498A0A087WWA1 95 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 JMJD7-PLA2G4BH0Y9G9 81 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 LINC00315P59091 139 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 Q5W150 140 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 RPL39LQ96EH5 51 aaKnown RBP1.78□□□□□ -2.12
PKP4-212ENST00000483881 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.12
PKP4-212ENST00000483881 DYNC2H1Q8NCM8 4307 aaKnown RBP1.77□□□□□ -2.13
PKP4-212ENST00000483881 NUPR2A6NF83 97 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 H3BUX3 64 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 NDUFA4O00483 81 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 MGPP08493 103 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 RNASE3P12724 160 aaKnown RBP1.77□□□□□ -2.13
PKP4-212ENST00000483881 C10orf99Q6UWK7 81 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 SMIM2Q9BVW6 85 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 RHPN1-AS1Q9BWJ2 59 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 CSMD3Q7Z407 3707 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 FRAS1Q86XX4 4008 aa1.77□□□□□ -2.13
PKP4-212ENST00000483881 H0YGX0 51 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 H3BQ85 93 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 CCL18P55774 89 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 USMG5Q96IX5 58 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 CCL19Q99731 98 aa1.76□□□□□ -2.13
PKP4-212ENST00000483881 IGKV3OR2-268A0A0C4DH90 116 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 A0A1B0GU33 70 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 IGKV2-29A2NJV5 120 aaPredicted RBP1.75□□□□□ -2.13
PKP4-212ENST00000483881 H3BUA1 57 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 IGKV4-1P06312 121 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 POLR2KP53803 58 aaKnown RBP1.75□□□□□ -2.13
PKP4-212ENST00000483881 RPL39P62891 51 aaKnown RBP1.75□□□□□ -2.13
PKP4-212ENST00000483881 KCNQ1DNQ9H478 68 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 SACSQ9NZJ4 4579 aa1.75□□□□□ -2.13
PKP4-212ENST00000483881 IGHV3-64A0A075B6Q5 118 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 A0A087WTM6 91 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 A0A096LNT2 108 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 H0Y9P7 68 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 M0QY20 66 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 NCR3O14931 201 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 LINC00472Q9H8W2 130 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 LYSTQ99698 3801 aa1.74□□□□□ -2.13
PKP4-212ENST00000483881 HMCN2Q8NDA2 5059 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 DEFB131AP59861 70 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 DEFB136Q30KP8 78 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 Q6ZTI0 123 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 COA5Q86WW8 74 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 WFDC10AQ9H1F0 79 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 KMT2AQ03164 3969 aa1.73□□□□□ -2.13
PKP4-212ENST00000483881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
PKP4-212ENST00000483881 UQCR11O14957 56 aa1.72□□□□□ -2.13
PKP4-212ENST00000483881 HTN1P15515 57 aa1.72□□□□□ -2.13
PKP4-212ENST00000483881 IGFL1Q6UW32 110 aa1.72□□□□□ -2.13
PKP4-212ENST00000483881 LINC00308Q8TCZ7 52 aa1.72□□□□□ -2.13
PKP4-212ENST00000483881 TRGV2A0A075B6R0 118 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 ETDCA0A1B0GVM5 59 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 TRBV6-4A0A1B0GX49 114 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 A8MTW9 85 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 HAMPP81172 84 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 PKHD1P08F94 4074 aa1.71□□□□□ -2.14
PKP4-212ENST00000483881 M0R2N4 97 aa1.7□□□□□ -2.14
PKP4-212ENST00000483881 NDUFA1O15239 70 aa1.7□□□□□ -2.14
PKP4-212ENST00000483881 COX6A2Q02221 97 aa1.7□□□□□ -2.14
PKP4-212ENST00000483881 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
PKP4-212ENST00000483881 HRNRQ86YZ3 2850 aaPredicted RBP1.69□□□□□ -2.14
PKP4-212ENST00000483881 ANK3Q12955 4377 aaKnown RBP1.69□□□□□ -2.14
PKP4-212ENST00000483881 NBDYA0A0U1RRE5 68 aa1.69□□□□□ -2.14
PKP4-212ENST00000483881 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms