RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
PKP4-212ENST00000483881 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
PKP4-212ENST00000483881 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
PKP4-212ENST00000483881 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
PKP4-212ENST00000483881 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
PKP4-212ENST00000483881 FOXD1Q16676 465 aa18.82■□□□□ 0.6
PKP4-212ENST00000483881 MSH5O43196 834 aa17.89■□□□□ 0.45
PKP4-212ENST00000483881 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
PKP4-212ENST00000483881 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
PKP4-212ENST00000483881 ADRA2BP18089 450 aa16.75■□□□□ 0.27
PKP4-212ENST00000483881 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PKP4-212ENST00000483881 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
PKP4-212ENST00000483881 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
PKP4-212ENST00000483881 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
PKP4-212ENST00000483881 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
PKP4-212ENST00000483881 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
PKP4-212ENST00000483881 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
PKP4-212ENST00000483881 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
PKP4-212ENST00000483881 POTEHQ6S545 545 aa14.86□□□□□ -0.03
PKP4-212ENST00000483881 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
PKP4-212ENST00000483881 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
PKP4-212ENST00000483881 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
PKP4-212ENST00000483881 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
PKP4-212ENST00000483881 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
PKP4-212ENST00000483881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.162e-12■□□□□ 9.1
PKP4-212ENST00000483881 DSG3P32926 999 aa13.94□□□□□ -0.18
PKP4-212ENST00000483881 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
PKP4-212ENST00000483881 CAPN15O75808 1086 aa13.76□□□□□ -0.21
PKP4-212ENST00000483881 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
PKP4-212ENST00000483881 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
PKP4-212ENST00000483881 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
PKP4-212ENST00000483881 ABCB7O75027 752 aa13.4□□□□□ -0.26
PKP4-212ENST00000483881 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
PKP4-212ENST00000483881 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
PKP4-212ENST00000483881 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
PKP4-212ENST00000483881 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
PKP4-212ENST00000483881 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
PKP4-212ENST00000483881 APLP2Q06481 763 aa13.03□□□□□ -0.32
PKP4-212ENST00000483881 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
PKP4-212ENST00000483881 HAX1O00165 279 aa12.92□□□□□ -0.34
PKP4-212ENST00000483881 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
PKP4-212ENST00000483881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
PKP4-212ENST00000483881 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
PKP4-212ENST00000483881 EVX2Q03828 476 aa12.78□□□□□ -0.36
PKP4-212ENST00000483881 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
PKP4-212ENST00000483881 POLA2Q14181 598 aa12.75□□□□□ -0.37
PKP4-212ENST00000483881 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
PKP4-212ENST00000483881 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
PKP4-212ENST00000483881 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
PKP4-212ENST00000483881 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
PKP4-212ENST00000483881 LHX8Q68G74 356 aa12.61□□□□□ -0.39
PKP4-212ENST00000483881 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
PKP4-212ENST00000483881 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
PKP4-212ENST00000483881 GABBR2O75899 941 aa12.36□□□□□ -0.43
PKP4-212ENST00000483881 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
PKP4-212ENST00000483881 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
PKP4-212ENST00000483881 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
PKP4-212ENST00000483881 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
PKP4-212ENST00000483881 KCNA4P22459 653 aa12.15□□□□□ -0.46
PKP4-212ENST00000483881 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
PKP4-212ENST00000483881 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
PKP4-212ENST00000483881 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
PKP4-212ENST00000483881 POTEMA6NI47 508 aa11.93□□□□□ -0.5
PKP4-212ENST00000483881 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
PKP4-212ENST00000483881 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
PKP4-212ENST00000483881 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
PKP4-212ENST00000483881 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
PKP4-212ENST00000483881 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
PKP4-212ENST00000483881 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
PKP4-212ENST00000483881 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
PKP4-212ENST00000483881 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
PKP4-212ENST00000483881 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
PKP4-212ENST00000483881 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
PKP4-212ENST00000483881 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
PKP4-212ENST00000483881 CLCN6P51797 869 aa11.71□□□□□ -0.53
PKP4-212ENST00000483881 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
PKP4-212ENST00000483881 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
PKP4-212ENST00000483881 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
PKP4-212ENST00000483881 FBLN2P98095 1184 aa11.6□□□□□ -0.55
PKP4-212ENST00000483881 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
PKP4-212ENST00000483881 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
PKP4-212ENST00000483881 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
PKP4-212ENST00000483881 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
PKP4-212ENST00000483881 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
PKP4-212ENST00000483881 LCE2DQ5TA82 110 aaPredicted RBP11.5□□□□□ -0.57
PKP4-212ENST00000483881 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
PKP4-212ENST00000483881 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
PKP4-212ENST00000483881 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
PKP4-212ENST00000483881 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
PKP4-212ENST00000483881 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
PKP4-212ENST00000483881 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
PKP4-212ENST00000483881 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
PKP4-212ENST00000483881 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
PKP4-212ENST00000483881 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
PKP4-212ENST00000483881 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
PKP4-212ENST00000483881 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
PKP4-212ENST00000483881 ZBTB22O15209 634 aa11.18□□□□□ -0.62
PKP4-212ENST00000483881 C7P10643 843 aa11.18□□□□□ -0.62
PKP4-212ENST00000483881 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
PKP4-212ENST00000483881 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms