RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 CSPG4Q6UVK1 2322 aa6.01□□□□□ -1.45
NUP35-209ENST00000479162 DEFB130BP0DP73 79 aa6□□□□□ -1.45
NUP35-209ENST00000479162 DEFB130AP0DP74 79 aa6□□□□□ -1.45
NUP35-209ENST00000479162 Q6ZSA8 131 aa6□□□□□ -1.45
NUP35-209ENST00000479162 NOTCH3Q9UM47 2321 aa6□□□□□ -1.45
NUP35-209ENST00000479162 TPRXLQ17RH7 258 aa6□□□□□ -1.45
NUP35-209ENST00000479162 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
NUP35-209ENST00000479162 SVEP1Q4LDE5 3571 aa5.99□□□□□ -1.45
NUP35-209ENST00000479162 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
NUP35-209ENST00000479162 SONP18583 2426 aaKnown RBP5.97□□□□□ -1.45
NUP35-209ENST00000479162 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
NUP35-209ENST00000479162 TENM2Q9NT68 2774 aa5.96□□□□□ -1.46
NUP35-209ENST00000479162 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
NUP35-209ENST00000479162 ANAPC11Q9NYG5 84 aa5.95□□□□□ -1.46
NUP35-209ENST00000479162 CUBNO60494 3623 aa5.95□□□□□ -1.46
NUP35-209ENST00000479162 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
NUP35-209ENST00000479162 TLN2Q9Y4G6 2542 aa5.94□□□□□ -1.46
NUP35-209ENST00000479162 GIG44P09565 113 aaPredicted RBP5.93□□□□□ -1.46
NUP35-209ENST00000479162 MTORP42345 2549 aa5.93□□□□□ -1.46
NUP35-209ENST00000479162 A0A1B0GU33 70 aa5.92□□□□□ -1.46
NUP35-209ENST00000479162 NIPBLQ6KC79 2804 aaeCLIP5.9□□□□□ -1.46
NUP35-209ENST00000479162 LELP1Q5T871 98 aa5.9□□□□□ -1.47
NUP35-209ENST00000479162 SPRR1BP22528 89 aa5.86□□□□□ -1.47
NUP35-209ENST00000479162 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
NUP35-209ENST00000479162 SETD2Q9BYW2 2564 aaPredicted RBP5.85□□□□□ -1.47
NUP35-209ENST00000479162 TENM1Q9UKZ4 2725 aa5.85□□□□□ -1.47
NUP35-209ENST00000479162 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
NUP35-209ENST00000479162 PRLHP81277 87 aa5.84□□□□□ -1.47
NUP35-209ENST00000479162 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
NUP35-209ENST00000479162 IGKV2-30P06310 120 aa5.84□□□□□ -1.48
NUP35-209ENST00000479162 SPINK1P00995 79 aa5.83□□□□□ -1.48
NUP35-209ENST00000479162 ATRQ13535 2644 aa5.82□□□□□ -1.48
NUP35-209ENST00000479162 A0A096LNI7 61 aa5.82□□□□□ -1.48
NUP35-209ENST00000479162 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
NUP35-209ENST00000479162 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
NUP35-209ENST00000479162 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
NUP35-209ENST00000479162 JMJD1CQ15652 2540 aa5.78□□□□□ -1.48
NUP35-209ENST00000479162 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
NUP35-209ENST00000479162 STAB1Q9NY15 2570 aa5.77□□□□□ -1.49
NUP35-209ENST00000479162 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
NUP35-209ENST00000479162 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
NUP35-209ENST00000479162 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
NUP35-209ENST00000479162 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
NUP35-209ENST00000479162 H3BNG1 76 aa5.71□□□□□ -1.5
NUP35-209ENST00000479162 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
NUP35-209ENST00000479162 LCE2BO14633 110 aa5.7□□□□□ -1.5
NUP35-209ENST00000479162 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
NUP35-209ENST00000479162 DYNC2H1Q8NCM8 4307 aaKnown RBP5.7□□□□□ -1.5
NUP35-209ENST00000479162 VWFP04275 2813 aa5.69□□□□□ -1.5
NUP35-209ENST00000479162 DEFB135Q30KP9 77 aa5.69□□□□□ -1.5
NUP35-209ENST00000479162 HUWE1Q7Z6Z7 4374 aaKnown RBP5.68□□□□□ -1.5
NUP35-209ENST00000479162 SPART-AS1P0CW21 52 aa5.68□□□□□ -1.5
NUP35-209ENST00000479162 C14orf177Q52M58 125 aa5.66□□□□□ -1.5
NUP35-209ENST00000479162 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
NUP35-209ENST00000479162 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.5
NUP35-209ENST00000479162 HTN3P15516 51 aa5.65□□□□□ -1.5
NUP35-209ENST00000479162 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
NUP35-209ENST00000479162 PKD1L1Q8TDX9 2849 aa5.65□□□□□ -1.51
NUP35-209ENST00000479162 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.51
NUP35-209ENST00000479162 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
NUP35-209ENST00000479162 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
NUP35-209ENST00000479162 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
NUP35-209ENST00000479162 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
NUP35-209ENST00000479162 SPINK6Q6UWN8 80 aa5.61□□□□□ -1.51
NUP35-209ENST00000479162 DEFB4AO15263 64 aa5.61□□□□□ -1.51
NUP35-209ENST00000479162 APLNQ9ULZ1 77 aa5.61□□□□□ -1.51
NUP35-209ENST00000479162 DNAH1Q9P2D7 4330 aa5.59□□□□□ -1.51
NUP35-209ENST00000479162 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
NUP35-209ENST00000479162 MGAM2Q2M2H8 2515 aa5.58□□□□□ -1.52
NUP35-209ENST00000479162 Q8N1X5 172 aa5.57□□□□□ -1.52
NUP35-209ENST00000479162 NBEAL1Q6ZS30 2694 aa5.57□□□□□ -1.52
NUP35-209ENST00000479162 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
NUP35-209ENST00000479162 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
NUP35-209ENST00000479162 NBEAL2Q6ZNJ1 2754 aa5.52□□□□□ -1.53
NUP35-209ENST00000479162 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
NUP35-209ENST00000479162 CSMD3Q7Z407 3707 aa5.51□□□□□ -1.53
NUP35-209ENST00000479162 R4GN34 69 aa5.51□□□□□ -1.53
NUP35-209ENST00000479162 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
NUP35-209ENST00000479162 XP32Q5T750 250 aa5.47□□□□□ -1.53
NUP35-209ENST00000479162 A0A0D9SG42 100 aa5.47□□□□□ -1.53
NUP35-209ENST00000479162 VPS13DQ5THJ4 4388 aa5.47□□□□□ -1.53
NUP35-209ENST00000479162 NOTCH1P46531 2555 aa5.47□□□□□ -1.53
NUP35-209ENST00000479162 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
NUP35-209ENST00000479162 KRTAP13-1Q8IUC0 172 aa5.44□□□□□ -1.54
NUP35-209ENST00000479162 Q6ZRN7 208 aaPredicted RBP5.43□□□□□ -1.54
NUP35-209ENST00000479162 S4R3F8 94 aa5.42□□□□□ -1.54
NUP35-209ENST00000479162 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
NUP35-209ENST00000479162 LYSTQ99698 3801 aa5.41□□□□□ -1.54
NUP35-209ENST00000479162 UBE2DNLQ8IWF7 75 aa5.41□□□□□ -1.54
NUP35-209ENST00000479162 STARD9Q9P2P6 4700 aa5.4□□□□□ -1.54
NUP35-209ENST00000479162 PLECQ15149 4684 aaKnown RBP5.4□□□□□ -1.54
NUP35-209ENST00000479162 DNAH17Q9UFH2 4485 aa5.39□□□□□ -1.55
NUP35-209ENST00000479162 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
NUP35-209ENST00000479162 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
NUP35-209ENST00000479162 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
NUP35-209ENST00000479162 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.56
NUP35-209ENST00000479162 RYR2Q92736 4967 aa5.33□□□□□ -1.56
NUP35-209ENST00000479162 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
NUP35-209ENST00000479162 KRTAP1-5Q9BYS1 174 aa5.32□□□□□ -1.56
NUP35-209ENST00000479162 DNAH10Q8IVF4 4471 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms