RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 COL6A3P12111 3177 aa5.74□□□□□ -1.49
EWSR1-216ENST00000479135 EYSQ5T1H1 3165 aa5.73□□□□□ -1.49
EWSR1-216ENST00000479135 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
EWSR1-216ENST00000479135 VPS13AQ96RL7 3174 aa5.72□□□□□ -1.49
EWSR1-216ENST00000479135 SETXQ7Z333 2677 aaKnown RBP5.72□□□□□ -1.49
EWSR1-216ENST00000479135 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
EWSR1-216ENST00000479135 NOTCH1P46531 2555 aa5.72□□□□□ -1.49
EWSR1-216ENST00000479135 UBR5O95071 2799 aaPredicted RBP5.72□□□□□ -1.49
EWSR1-216ENST00000479135 ITPR1Q14643 2758 aa5.71□□□□□ -1.5
EWSR1-216ENST00000479135 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
EWSR1-216ENST00000479135 ATMQ13315 3056 aa5.69□□□□□ -1.5
EWSR1-216ENST00000479135 NBEAL1Q6ZS30 2694 aa5.68□□□□□ -1.5
EWSR1-216ENST00000479135 BAHCC1Q9P281 2608 aa5.67□□□□□ -1.5
EWSR1-216ENST00000479135 ADGRG4Q8IZF6 3080 aa5.65□□□□□ -1.5
EWSR1-216ENST00000479135 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.5
EWSR1-216ENST00000479135 DCHS1Q96JQ0 3298 aa5.62□□□□□ -1.51
EWSR1-216ENST00000479135 TEX15Q9BXT5 2789 aa5.61□□□□□ -1.51
EWSR1-216ENST00000479135 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
EWSR1-216ENST00000479135 NSD1Q96L73 2696 aaPredicted RBP5.6□□□□□ -1.51
EWSR1-216ENST00000479135 XP32Q5T750 250 aa5.59□□□□□ -1.51
EWSR1-216ENST00000479135 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
EWSR1-216ENST00000479135 LAMA1P25391 3075 aa5.59□□□□□ -1.52
EWSR1-216ENST00000479135 LAMA5O15230 3695 aa5.58□□□□□ -1.52
EWSR1-216ENST00000479135 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
EWSR1-216ENST00000479135 HRNRQ86YZ3 2850 aaPredicted RBP5.58□□□□□ -1.52
EWSR1-216ENST00000479135 UTP20O75691 2785 aaKnown RBP5.58□□□□□ -1.52
EWSR1-216ENST00000479135 KALRNO60229 2985 aa5.56□□□□□ -1.52
EWSR1-216ENST00000479135 ZANQ9Y493 2812 aa5.55□□□□□ -1.52
EWSR1-216ENST00000479135 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
EWSR1-216ENST00000479135 COL12A1Q99715 3063 aa5.52□□□□□ -1.53
EWSR1-216ENST00000479135 CFAP47Q6ZTR5 3102 aa5.52□□□□□ -1.53
EWSR1-216ENST00000479135 TACC2O95359 2948 aa5.5□□□□□ -1.53
EWSR1-216ENST00000479135 ZZEF1O43149 2961 aa5.49□□□□□ -1.53
EWSR1-216ENST00000479135 BOD1L1Q8NFC6 3051 aa5.48□□□□□ -1.53
EWSR1-216ENST00000479135 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
EWSR1-216ENST00000479135 FRYLO94915 3013 aa5.47□□□□□ -1.53
EWSR1-216ENST00000479135 RELNP78509 3460 aa5.46□□□□□ -1.53
EWSR1-216ENST00000479135 APCP25054 2843 aa5.46□□□□□ -1.54
EWSR1-216ENST00000479135 ASH1LQ9NR48 2969 aaKnown RBP5.46□□□□□ -1.54
EWSR1-216ENST00000479135 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
EWSR1-216ENST00000479135 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
EWSR1-216ENST00000479135 NBPF19A0A087WUL8 3843 aa5.43□□□□□ -1.54
EWSR1-216ENST00000479135 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
EWSR1-216ENST00000479135 LOC400499M0QZD8 3231 aa5.42□□□□□ -1.54
EWSR1-216ENST00000479135 LRBAP50851 2863 aa5.41□□□□□ -1.54
EWSR1-216ENST00000479135 HIVEP1P15822 2718 aa5.4□□□□□ -1.55
EWSR1-216ENST00000479135 KMT2BQ9UMN6 2715 aaPredicted RBP5.39□□□□□ -1.55
EWSR1-216ENST00000479135 INE1O15225 51 aa5.39□□□□□ -1.55
EWSR1-216ENST00000479135 MXRA5Q9NR99 2828 aa5.37□□□□□ -1.55
EWSR1-216ENST00000479135 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
EWSR1-216ENST00000479135 NF1P21359 2839 aa5.35□□□□□ -1.55
EWSR1-216ENST00000479135 SPENQ96T58 3664 aaKnown RBP5.35□□□□□ -1.55
EWSR1-216ENST00000479135 TNRC18O15417 2968 aaPredicted RBP5.35□□□□□ -1.55
EWSR1-216ENST00000479135 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
EWSR1-216ENST00000479135 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
EWSR1-216ENST00000479135 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
EWSR1-216ENST00000479135 CELSR2Q9HCU4 2923 aa5.28□□□□□ -1.56
EWSR1-216ENST00000479135 FBN2P35556 2912 aa5.28□□□□□ -1.56
EWSR1-216ENST00000479135 CRYBG3Q68DQ2 2970 aa5.28□□□□□ -1.56
EWSR1-216ENST00000479135 DMDP11532 3685 aa5.27□□□□□ -1.57
EWSR1-216ENST00000479135 ZFHX3Q15911 3703 aa5.27□□□□□ -1.57
EWSR1-216ENST00000479135 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
EWSR1-216ENST00000479135 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
EWSR1-216ENST00000479135 TENM3Q9P273 2699 aa5.27□□□□□ -1.57
EWSR1-216ENST00000479135 DMXL1Q9Y485 3027 aa5.23□□□□□ -1.57
EWSR1-216ENST00000479135 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
EWSR1-216ENST00000479135 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
EWSR1-216ENST00000479135 TENM1Q9UKZ4 2725 aa5.17□□□□□ -1.58
EWSR1-216ENST00000479135 SMG1Q96Q15 3661 aaKnown RBP5.15□□□□□ -1.58
EWSR1-216ENST00000479135 TENM4Q6N022 2769 aa5.14□□□□□ -1.59
EWSR1-216ENST00000479135 CSMD2Q7Z408 3487 aa5.14□□□□□ -1.59
EWSR1-216ENST00000479135 VWFP04275 2813 aa5.13□□□□□ -1.59
EWSR1-216ENST00000479135 PDZD2O15018 2839 aa5.08□□□□□ -1.6
EWSR1-216ENST00000479135 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
EWSR1-216ENST00000479135 CUBNO60494 3623 aa5□□□□□ -1.61
EWSR1-216ENST00000479135 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
EWSR1-216ENST00000479135 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
EWSR1-216ENST00000479135 VPS13CQ709C8 3753 aa4.91□□□□□ -1.62
EWSR1-216ENST00000479135 CELSR1Q9NYQ6 3014 aa4.91□□□□□ -1.62
EWSR1-216ENST00000479135 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
EWSR1-216ENST00000479135 TGP01266 2768 aa4.89□□□□□ -1.63
EWSR1-216ENST00000479135 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
EWSR1-216ENST00000479135 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
EWSR1-216ENST00000479135 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
EWSR1-216ENST00000479135 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
EWSR1-216ENST00000479135 FBN1P35555 2871 aaKnown RBP4.83□□□□□ -1.64
EWSR1-216ENST00000479135 MUC3AQ02505 3323 aa4.8□□□□□ -1.64
EWSR1-216ENST00000479135 ANK3Q12955 4377 aaKnown RBP4.77□□□□□ -1.65
EWSR1-216ENST00000479135 SRRM2Q9UQ35 2752 aaKnown RBP4.77□□□□□ -1.65
EWSR1-216ENST00000479135 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
EWSR1-216ENST00000479135 BSNQ9UPA5 3926 aa4.76□□□□□ -1.65
EWSR1-216ENST00000479135 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
EWSR1-216ENST00000479135 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
EWSR1-216ENST00000479135 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
EWSR1-216ENST00000479135 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
EWSR1-216ENST00000479135 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
EWSR1-216ENST00000479135 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
EWSR1-216ENST00000479135 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
EWSR1-216ENST00000479135 KRTAP3-2Q9BYR7 98 aa4.61□□□□□ -1.67
EWSR1-216ENST00000479135 AKAP9Q99996 3911 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 303.1 ms