RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
TMED4-204ENST00000477639 CDK2AP2O75956 126 aa12.18□□□□□ -0.46
TMED4-204ENST00000477639 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
TMED4-204ENST00000477639 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
TMED4-204ENST00000477639 DNAH11Q96DT5 4516 aa12.15□□□□□ -0.46
TMED4-204ENST00000477639 A0A087X002 238 aa12.14□□□□□ -0.47
TMED4-204ENST00000477639 Q1T7F1 81 aa12.14□□□□□ -0.47
TMED4-204ENST00000477639 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
TMED4-204ENST00000477639 FAT2Q9NYQ8 4349 aa12.14□□□□□ -0.47
TMED4-204ENST00000477639 MRPL34Q9BQ48 92 aaKnown RBP12.13□□□□□ -0.47
TMED4-204ENST00000477639 CD164Q04900 197 aa12.12□□□□□ -0.47
TMED4-204ENST00000477639 SSBP3-AS1Q7Z2R9 100 aa12.12□□□□□ -0.47
TMED4-204ENST00000477639 BIRC6Q9NR09 4857 aa12.1□□□□□ -0.47
TMED4-204ENST00000477639 NDUFS5O43920 106 aa12.09□□□□□ -0.47
TMED4-204ENST00000477639 IGLV7-46A0A075B6I9 117 aa12.08□□□□□ -0.48
TMED4-204ENST00000477639 Q6ZSA8 131 aa12.08□□□□□ -0.48
TMED4-204ENST00000477639 PRO0628Q9UI54 55 aa12.08□□□□□ -0.48
TMED4-204ENST00000477639 SPINK6Q6UWN8 80 aa12.06□□□□□ -0.48
TMED4-204ENST00000477639 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
TMED4-204ENST00000477639 A0A1B0GVY2 172 aa12.05□□□□□ -0.48
TMED4-204ENST00000477639 PKD1P98161 4303 aa12.03□□□□□ -0.48
TMED4-204ENST00000477639 PCOTHQ58A44 107 aa12.03□□□□□ -0.48
TMED4-204ENST00000477639 PKHD1P08F94 4074 aa12□□□□□ -0.49
TMED4-204ENST00000477639 KRTAP13-2Q52LG2 175 aa11.99□□□□□ -0.49
TMED4-204ENST00000477639 BRK1Q8WUW1 75 aa11.98□□□□□ -0.49
TMED4-204ENST00000477639 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.5
TMED4-204ENST00000477639 C8orf87E5RJ46 101 aa11.95□□□□□ -0.5
TMED4-204ENST00000477639 V9GYY9 64 aa11.95□□□□□ -0.5
TMED4-204ENST00000477639 COA5Q86WW8 74 aa11.94□□□□□ -0.5
TMED4-204ENST00000477639 Q5W150 140 aa11.94□□□□□ -0.5
TMED4-204ENST00000477639 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
TMED4-204ENST00000477639 PSPHP1O15172 72 aa11.93□□□□□ -0.5
TMED4-204ENST00000477639 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
TMED4-204ENST00000477639 LOC101927531A0A1B0GV80 90 aa11.9□□□□□ -0.5
TMED4-204ENST00000477639 KRTAP1-4P0C5Y4 121 aa11.89□□□□□ -0.51
TMED4-204ENST00000477639 C1orf195Q5TG92 126 aa11.89□□□□□ -0.51
TMED4-204ENST00000477639 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
TMED4-204ENST00000477639 A8MUN3 132 aa11.87□□□□□ -0.51
TMED4-204ENST00000477639 LINC00313P59037 77 aa11.85□□□□□ -0.51
TMED4-204ENST00000477639 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
TMED4-204ENST00000477639 Q5VV11 94 aa11.82□□□□□ -0.52
TMED4-204ENST00000477639 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
TMED4-204ENST00000477639 HRES1P13985 223 aa11.8□□□□□ -0.52
TMED4-204ENST00000477639 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
TMED4-204ENST00000477639 KRTAP16-1A8MUX0 517 aa11.76□□□□□ -0.53
TMED4-204ENST00000477639 FAM229AH3BQW9 127 aa11.74□□□□□ -0.53
TMED4-204ENST00000477639 PRR15LQ9BU68 103 aa11.74□□□□□ -0.53
TMED4-204ENST00000477639 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
TMED4-204ENST00000477639 HERC2O95714 4834 aa11.72□□□□□ -0.53
TMED4-204ENST00000477639 RYR1P21817 5038 aa11.7□□□□□ -0.54
TMED4-204ENST00000477639 TYMSOSQ8TAI1 123 aa11.69□□□□□ -0.54
TMED4-204ENST00000477639 LINC01558Q9Y6Z2 57 aa11.68□□□□□ -0.54
TMED4-204ENST00000477639 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
TMED4-204ENST00000477639 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
TMED4-204ENST00000477639 RETNLBQ9BQ08 111 aa11.67□□□□□ -0.54
TMED4-204ENST00000477639 CHKB-CPT1BH3BT56 60 aa11.67□□□□□ -0.54
TMED4-204ENST00000477639 Q75L30 129 aa11.67□□□□□ -0.54
TMED4-204ENST00000477639 IGKV2-30P06310 120 aa11.66□□□□□ -0.54
TMED4-204ENST00000477639 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
TMED4-204ENST00000477639 HSPG2P98160 4391 aa11.65□□□□□ -0.54
TMED4-204ENST00000477639 SPINK1P00995 79 aa11.65□□□□□ -0.54
TMED4-204ENST00000477639 ACYP2P14621 99 aa11.61□□□□□ -0.55
TMED4-204ENST00000477639 DMAC1Q96GE9 116 aa11.61□□□□□ -0.55
TMED4-204ENST00000477639 A8MU10 97 aa11.58□□□□□ -0.56
TMED4-204ENST00000477639 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
TMED4-204ENST00000477639 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
TMED4-204ENST00000477639 RPS29P62273 56 aaKnown RBP11.53□□□□□ -0.56
TMED4-204ENST00000477639 LINC00304Q8N9R0 145 aa11.53□□□□□ -0.56
TMED4-204ENST00000477639 KRTAP4-5Q9BYR2 181 aa11.52□□□□□ -0.56
TMED4-204ENST00000477639 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
TMED4-204ENST00000477639 Q8N1X5 172 aa11.51□□□□□ -0.57
TMED4-204ENST00000477639 A6NED7 52 aa11.5□□□□□ -0.57
TMED4-204ENST00000477639 LCA10Q71F78 164 aa11.5□□□□□ -0.57
TMED4-204ENST00000477639 PCLOQ9Y6V0 5065 aa11.47□□□□□ -0.57
TMED4-204ENST00000477639 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
TMED4-204ENST00000477639 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.58
TMED4-204ENST00000477639 FAT1Q14517 4588 aa11.44□□□□□ -0.58
TMED4-204ENST00000477639 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
TMED4-204ENST00000477639 Q5VSD8 79 aa11.42□□□□□ -0.58
TMED4-204ENST00000477639 CDC42SE1Q9NRR8 79 aa11.41□□□□□ -0.58
TMED4-204ENST00000477639 SPINK7P58062 85 aa11.4□□□□□ -0.58
TMED4-204ENST00000477639 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
TMED4-204ENST00000477639 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
TMED4-204ENST00000477639 PMAIP1Q13794 54 aa11.32□□□□□ -0.6
TMED4-204ENST00000477639 C7orf65Q6ZTY9 151 aa11.32□□□□□ -0.6
TMED4-204ENST00000477639 SPTSSBQ8NFR3 76 aa11.31□□□□□ -0.6
TMED4-204ENST00000477639 A8MUU9 505 aa11.27□□□□□ -0.61
TMED4-204ENST00000477639 C20orf166-AS1Q96NR2 134 aa11.26□□□□□ -0.61
TMED4-204ENST00000477639 A0A1B0GU69 56 aa11.24□□□□□ -0.61
TMED4-204ENST00000477639 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
TMED4-204ENST00000477639 A6NN06 94 aa11.2□□□□□ -0.62
TMED4-204ENST00000477639 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
TMED4-204ENST00000477639 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
TMED4-204ENST00000477639 SPATA8Q6RVD6 105 aa11.08□□□□□ -0.64
TMED4-204ENST00000477639 KTN1-AS1Q86SY8 53 aa11.07□□□□□ -0.64
TMED4-204ENST00000477639 KRTAP3-1Q9BYR8 98 aa11.04□□□□□ -0.64
TMED4-204ENST00000477639 UQCR11O14957 56 aa11.02□□□□□ -0.65
TMED4-204ENST00000477639 LRP1Q07954 4544 aaKnown RBP11.02□□□□□ -0.65
TMED4-204ENST00000477639 J3QL48 77 aa11.01□□□□□ -0.65
TMED4-204ENST00000477639 KRTAP10-8P60410 259 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms