RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
LSM2-211ENST00000475835 MTORP42345 2549 aa2.07□□□□□ -2.08
LSM2-211ENST00000475835 CRYBG3Q68DQ2 2970 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 KRTAP10-11P60412 298 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 KRTAP7-1Q8IUC3 87 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 MUC3AQ02505 3323 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 FBN2P35556 2912 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 ACANP16112 2415 aa2.06□□□□□ -2.08
LSM2-211ENST00000475835 K7EIL1 84 aa2.05□□□□□ -2.08
LSM2-211ENST00000475835 NOTCH2Q04721 2471 aa2.05□□□□□ -2.08
LSM2-211ENST00000475835 CENPEQ02224 2701 aa2.04□□□□□ -2.08
LSM2-211ENST00000475835 APCP25054 2843 aa2.04□□□□□ -2.08
LSM2-211ENST00000475835 CELSR2Q9HCU4 2923 aa2.04□□□□□ -2.08
LSM2-211ENST00000475835 KRTAP12-2P59991 146 aa2.03□□□□□ -2.08
LSM2-211ENST00000475835 RELNP78509 3460 aa2.03□□□□□ -2.08
LSM2-211ENST00000475835 TENM2Q9NT68 2774 aa2.03□□□□□ -2.09
LSM2-211ENST00000475835 COL12A1Q99715 3063 aa2.02□□□□□ -2.09
LSM2-211ENST00000475835 LAMA5O15230 3695 aa2.02□□□□□ -2.09
LSM2-211ENST00000475835 XP32Q5T750 250 aa2.02□□□□□ -2.09
LSM2-211ENST00000475835 HIVEP1P15822 2718 aa2.02□□□□□ -2.09
LSM2-211ENST00000475835 NBEAL2Q6ZNJ1 2754 aa2.01□□□□□ -2.09
LSM2-211ENST00000475835 UNC79Q9P2D8 2635 aa2.01□□□□□ -2.09
LSM2-211ENST00000475835 PDZD2O15018 2839 aa2.01□□□□□ -2.09
LSM2-211ENST00000475835 TEP1Q99973 2627 aaKnown RBP2□□□□□ -2.09
LSM2-211ENST00000475835 KRTAP1-5Q9BYS1 174 aa2□□□□□ -2.09
LSM2-211ENST00000475835 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
LSM2-211ENST00000475835 FASNP49327 2511 aaKnown RBP2□□□□□ -2.09
LSM2-211ENST00000475835 NF1P21359 2839 aa2□□□□□ -2.09
LSM2-211ENST00000475835 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
LSM2-211ENST00000475835 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
LSM2-211ENST00000475835 SPINK6Q6UWN8 80 aa1.98□□□□□ -2.09
LSM2-211ENST00000475835 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
LSM2-211ENST00000475835 SVEP1Q4LDE5 3571 aa1.98□□□□□ -2.09
LSM2-211ENST00000475835 ATRQ13535 2644 aa1.98□□□□□ -2.09
LSM2-211ENST00000475835 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
LSM2-211ENST00000475835 APLNQ9ULZ1 77 aa1.97□□□□□ -2.09
LSM2-211ENST00000475835 F8P00451 2351 aa1.96□□□□□ -2.09
LSM2-211ENST00000475835 TENM3Q9P273 2699 aa1.96□□□□□ -2.1
LSM2-211ENST00000475835 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
LSM2-211ENST00000475835 NIPBLQ6KC79 2804 aaeCLIP1.96□□□□□ -2.1
LSM2-211ENST00000475835 TENM4Q6N022 2769 aa1.96□□□□□ -2.1
LSM2-211ENST00000475835 AKAP9Q99996 3911 aa1.95□□□□□ -2.1
LSM2-211ENST00000475835 VPS13CQ709C8 3753 aa1.95□□□□□ -2.1
LSM2-211ENST00000475835 VWFP04275 2813 aa1.95□□□□□ -2.1
LSM2-211ENST00000475835 TENM1Q9UKZ4 2725 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 SPINK1P00995 79 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 KRTAP3-3Q9BYR6 98 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 KRTAP3-2Q9BYR7 98 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 S4R3F8 94 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 MAST4O15021 2626 aa1.94□□□□□ -2.1
LSM2-211ENST00000475835 HELZ2Q9BYK8 2649 aaKnown RBP1.93□□□□□ -2.1
LSM2-211ENST00000475835 BAHCC1Q9P281 2608 aa1.93□□□□□ -2.1
LSM2-211ENST00000475835 OTOGQ6ZRI0 2925 aa1.93□□□□□ -2.1
LSM2-211ENST00000475835 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
LSM2-211ENST00000475835 CSMD2Q7Z408 3487 aa1.92□□□□□ -2.1
LSM2-211ENST00000475835 FLNBO75369 2602 aaKnown RBP1.92□□□□□ -2.1
LSM2-211ENST00000475835 HECTD1Q9ULT8 2610 aa1.91□□□□□ -2.1
LSM2-211ENST00000475835 ANK3Q12955 4377 aaKnown RBP1.9□□□□□ -2.1
LSM2-211ENST00000475835 PKD1L1Q8TDX9 2849 aa1.9□□□□□ -2.11
LSM2-211ENST00000475835 STAB1Q9NY15 2570 aa1.88□□□□□ -2.11
LSM2-211ENST00000475835 KRTAP10-8P60410 259 aa1.88□□□□□ -2.11
LSM2-211ENST00000475835 NBEAL1Q6ZS30 2694 aa1.88□□□□□ -2.11
LSM2-211ENST00000475835 KRTAP3-1Q9BYR8 98 aa1.87□□□□□ -2.11
LSM2-211ENST00000475835 ZNF469Q96JG9 3925 aaPredicted RBP1.87□□□□□ -2.11
LSM2-211ENST00000475835 CUBNO60494 3623 aa1.87□□□□□ -2.11
LSM2-211ENST00000475835 NOTCH1P46531 2555 aa1.87□□□□□ -2.11
LSM2-211ENST00000475835 Q5VSD8 79 aa1.86□□□□□ -2.11
LSM2-211ENST00000475835 KRTAP13-2Q52LG2 175 aa1.85□□□□□ -2.11
LSM2-211ENST00000475835 COL6A5A8TX70 2615 aa1.84□□□□□ -2.11
LSM2-211ENST00000475835 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.12
LSM2-211ENST00000475835 NBPF19A0A087WUL8 3843 aa1.83□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP10-6P60371 365 aaPredicted RBP1.83□□□□□ -2.12
LSM2-211ENST00000475835 A0A0D9SG42 100 aa1.82□□□□□ -2.12
LSM2-211ENST00000475835 A0A1B0GVY2 172 aa1.82□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
LSM2-211ENST00000475835 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
LSM2-211ENST00000475835 M0QZ58 72 aa1.81□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP1-4P0C5Y4 121 aa1.81□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
LSM2-211ENST00000475835 KRTAP10-2P60368 255 aa1.81□□□□□ -2.12
LSM2-211ENST00000475835 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
LSM2-211ENST00000475835 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
LSM2-211ENST00000475835 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
LSM2-211ENST00000475835 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
LSM2-211ENST00000475835 DNAH1Q9P2D7 4330 aa1.78□□□□□ -2.12
LSM2-211ENST00000475835 FBN1P35555 2871 aaKnown RBP1.78□□□□□ -2.12
LSM2-211ENST00000475835 LCE2AQ5TA79 106 aaPredicted RBP1.77□□□□□ -2.13
LSM2-211ENST00000475835 DNAH3Q8TD57 4116 aa1.77□□□□□ -2.13
LSM2-211ENST00000475835 TRRAPQ9Y4A5 3859 aa1.76□□□□□ -2.13
LSM2-211ENST00000475835 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
LSM2-211ENST00000475835 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
LSM2-211ENST00000475835 TGP01266 2768 aa1.76□□□□□ -2.13
LSM2-211ENST00000475835 COL7A1Q02388 2944 aa1.75□□□□□ -2.13
LSM2-211ENST00000475835 ANK2Q01484 3957 aa1.74□□□□□ -2.13
LSM2-211ENST00000475835 SMR3BP02814 79 aaPredicted RBP1.73□□□□□ -2.13
LSM2-211ENST00000475835 FBN3Q75N90 2809 aa1.73□□□□□ -2.13
LSM2-211ENST00000475835 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
LSM2-211ENST00000475835 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
LSM2-211ENST00000475835 CMYA5Q8N3K9 4069 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms