RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SMCR5Q8TEV8 140 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
VARS-222ENST00000470953 H7BZZ5 65 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 IGLV6-57P01721 117 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 CCKP06307 115 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 SPRR1AP35321 89 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 MOBPQ13875 183 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 KRTAP13-2Q52LG2 175 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 ADAMTSL4-AS1Q5T5F5 129 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 SOSTDC1Q6X4U4 206 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.87
VARS-222ENST00000470953 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
VARS-222ENST00000470953 LCE2BO14633 110 aa3.33□□□□□ -1.88
VARS-222ENST00000470953 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
VARS-222ENST00000470953 Q8NBF4 154 aa3.33□□□□□ -1.88
VARS-222ENST00000470953 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
VARS-222ENST00000470953 TRAV7A0A075B6U4 112 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 TRAV13-2A0A0B4J235 113 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 LST1O00453 97 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 COX7BP24311 80 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 Q6ZVQ6 151 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 LITAFQ99732 161 aa3.32□□□□□ -1.88
VARS-222ENST00000470953 EIF4EBP3O60516 100 aaPredicted RBP3.31□□□□□ -1.88
VARS-222ENST00000470953 ERC2-IT1O76042 136 aa3.31□□□□□ -1.88
VARS-222ENST00000470953 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
VARS-222ENST00000470953 Q9BRP9 147 aa3.31□□□□□ -1.88
VARS-222ENST00000470953 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
VARS-222ENST00000470953 Q1T7F1 81 aa3.3□□□□□ -1.88
VARS-222ENST00000470953 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
VARS-222ENST00000470953 LCA10Q71F78 164 aa3.3□□□□□ -1.88
VARS-222ENST00000470953 SPINK1P00995 79 aa3.29□□□□□ -1.88
VARS-222ENST00000470953 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
VARS-222ENST00000470953 RBM3P98179 157 aaKnown RBP3.29□□□□□ -1.88
VARS-222ENST00000470953 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
VARS-222ENST00000470953 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
VARS-222ENST00000470953 DEFB105AQ8NG35 78 aa3.29□□□□□ -1.88
VARS-222ENST00000470953 GHRHP01286 108 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 MUSTN1Q8IVN3 82 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 LIMD2Q9BT23 127 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
VARS-222ENST00000470953 F8WEM9 126 aa3.27□□□□□ -1.89
VARS-222ENST00000470953 CXCL6P80162 114 aa3.27□□□□□ -1.89
VARS-222ENST00000470953 Q1RN00 199 aa3.27□□□□□ -1.89
VARS-222ENST00000470953 C20orf197Q8N268 126 aa3.27□□□□□ -1.89
VARS-222ENST00000470953 TMEM256-PLSCR3K7ERE1 68 aa3.26□□□□□ -1.89
VARS-222ENST00000470953 TRIAP1O43715 76 aa3.26□□□□□ -1.89
VARS-222ENST00000470953 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
VARS-222ENST00000470953 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
VARS-222ENST00000470953 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
VARS-222ENST00000470953 H7C2G1 150 aa3.25□□□□□ -1.89
VARS-222ENST00000470953 DNAL4O96015 105 aa3.25□□□□□ -1.89
VARS-222ENST00000470953 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
VARS-222ENST00000470953 SMIM11BQ8TCY0 68 aa3.25□□□□□ -1.89
VARS-222ENST00000470953 A8MUN3 132 aa3.24□□□□□ -1.89
VARS-222ENST00000470953 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
VARS-222ENST00000470953 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
VARS-222ENST00000470953 SPRR1BP22528 89 aa3.23□□□□□ -1.89
VARS-222ENST00000470953 Q8N377 158 aa3.23□□□□□ -1.89
VARS-222ENST00000470953 OBSCN-AS1Q96MR7 158 aa3.23□□□□□ -1.89
VARS-222ENST00000470953 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
VARS-222ENST00000470953 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
VARS-222ENST00000470953 IGLV5-48A0A075B6I7 105 aa3.21□□□□□ -1.9
VARS-222ENST00000470953 A6NN06 94 aa3.21□□□□□ -1.9
VARS-222ENST00000470953 LINC00575Q6W349 94 aa3.21□□□□□ -1.9
VARS-222ENST00000470953 Q6ZQY7 126 aa3.21□□□□□ -1.9
VARS-222ENST00000470953 MP68P56378 58 aa3.2□□□□□ -1.9
VARS-222ENST00000470953 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
VARS-222ENST00000470953 MPLKIPQ8TAP9 179 aa3.2□□□□□ -1.9
VARS-222ENST00000470953 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
VARS-222ENST00000470953 hDV103S1A0JD37 113 aa3.19□□□□□ -1.9
VARS-222ENST00000470953 BAALC-AS2P0C853 105 aa3.19□□□□□ -1.9
VARS-222ENST00000470953 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.19□□□□□ -1.9
VARS-222ENST00000470953 CLEC2BQ92478 149 aa3.19□□□□□ -1.9
VARS-222ENST00000470953 A0A087WVE0 104 aa3.18□□□□□ -1.9
VARS-222ENST00000470953 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
VARS-222ENST00000470953 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
VARS-222ENST00000470953 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
VARS-222ENST00000470953 XP32Q5T750 250 aa3.18□□□□□ -1.9
VARS-222ENST00000470953 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
VARS-222ENST00000470953 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
VARS-222ENST00000470953 H0YGX0 51 aa3.17□□□□□ -1.9
VARS-222ENST00000470953 SMIM29Q86T20 159 aa3.17□□□□□ -1.9
VARS-222ENST00000470953 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
VARS-222ENST00000470953 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
VARS-222ENST00000470953 JMJD7-PLA2G4BH0Y9G9 81 aa3.16□□□□□ -1.9
VARS-222ENST00000470953 LINC00313P59037 77 aa3.16□□□□□ -1.9
VARS-222ENST00000470953 PCOTHQ58A44 107 aa3.16□□□□□ -1.9
VARS-222ENST00000470953 TRAV22A0A0B4J277 110 aa3.15□□□□□ -1.91
VARS-222ENST00000470953 PSPHP1O15172 72 aa3.15□□□□□ -1.91
VARS-222ENST00000470953 IGFL1Q6UW32 110 aa3.15□□□□□ -1.91
VARS-222ENST00000470953 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
VARS-222ENST00000470953 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.91
VARS-222ENST00000470953 A0A1B0GW54 56 aa3.14□□□□□ -1.91
VARS-222ENST00000470953 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
VARS-222ENST00000470953 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
VARS-222ENST00000470953 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
VARS-222ENST00000470953 Q75L30 129 aa3.13□□□□□ -1.91
VARS-222ENST00000470953 FAM218AQ96MZ4 157 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms