RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 Q1T7F1 81 aa4.24□□□□□ -1.73
KDM3A-210ENST00000470160 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
KDM3A-210ENST00000470160 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
KDM3A-210ENST00000470160 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
KDM3A-210ENST00000470160 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
KDM3A-210ENST00000470160 LRP1BQ9NZR2 4599 aa4.22□□□□□ -1.73
KDM3A-210ENST00000470160 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
KDM3A-210ENST00000470160 NREPQ16612 68 aa4.2□□□□□ -1.74
KDM3A-210ENST00000470160 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
KDM3A-210ENST00000470160 APOBP04114 4563 aaKnown RBP4.19□□□□□ -1.74
KDM3A-210ENST00000470160 ASB16-AS1Q495Z4 193 aa4.18□□□□□ -1.74
KDM3A-210ENST00000470160 LINC00472Q9H8W2 130 aa4.18□□□□□ -1.74
KDM3A-210ENST00000470160 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
KDM3A-210ENST00000470160 Q5VV11 94 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 A6NED7 52 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 DSCR10P59022 87 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 BPY2O14599 106 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
KDM3A-210ENST00000470160 HAMPP81172 84 aa4.17□□□□□ -1.74
KDM3A-210ENST00000470160 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
KDM3A-210ENST00000470160 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
KDM3A-210ENST00000470160 PKHD1P08F94 4074 aa4.15□□□□□ -1.74
KDM3A-210ENST00000470160 Q96NJ1 140 aa4.15□□□□□ -1.75
KDM3A-210ENST00000470160 A0A087WSZ3 146 aa4.14□□□□□ -1.75
KDM3A-210ENST00000470160 LCE2BO14633 110 aa4.14□□□□□ -1.75
KDM3A-210ENST00000470160 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
KDM3A-210ENST00000470160 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
KDM3A-210ENST00000470160 MOBPQ13875 183 aa4.13□□□□□ -1.75
KDM3A-210ENST00000470160 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
KDM3A-210ENST00000470160 A0A0G2JQZ4 141 aa4.12□□□□□ -1.75
KDM3A-210ENST00000470160 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
KDM3A-210ENST00000470160 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
KDM3A-210ENST00000470160 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
KDM3A-210ENST00000470160 A8MWP4 228 aa4.12□□□□□ -1.75
KDM3A-210ENST00000470160 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
KDM3A-210ENST00000470160 CDK2AP2O75956 126 aa4.11□□□□□ -1.75
KDM3A-210ENST00000470160 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
KDM3A-210ENST00000470160 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
KDM3A-210ENST00000470160 A0A087X002 238 aa4.1□□□□□ -1.75
KDM3A-210ENST00000470160 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
KDM3A-210ENST00000470160 K7EQZ3 153 aa4.09□□□□□ -1.75
KDM3A-210ENST00000470160 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
KDM3A-210ENST00000470160 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
KDM3A-210ENST00000470160 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
KDM3A-210ENST00000470160 RYR3Q15413 4870 aa4.07□□□□□ -1.76
KDM3A-210ENST00000470160 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
KDM3A-210ENST00000470160 Q8N9L7 120 aa4.07□□□□□ -1.76
KDM3A-210ENST00000470160 PRR4Q16378 134 aa4.07□□□□□ -1.76
KDM3A-210ENST00000470160 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
KDM3A-210ENST00000470160 MMP24-AS1A0A0U1RRL7 71 aa4.06□□□□□ -1.76
KDM3A-210ENST00000470160 SPINK1P00995 79 aa4.06□□□□□ -1.76
KDM3A-210ENST00000470160 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
KDM3A-210ENST00000470160 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
KDM3A-210ENST00000470160 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
KDM3A-210ENST00000470160 HSPG2P98160 4391 aa4.05□□□□□ -1.76
KDM3A-210ENST00000470160 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
KDM3A-210ENST00000470160 NDUFB1O75438 58 aa4.05□□□□□ -1.76
KDM3A-210ENST00000470160 RYR1P21817 5038 aa4.04□□□□□ -1.76
KDM3A-210ENST00000470160 TYMSOSQ8TAI1 123 aa4.03□□□□□ -1.76
KDM3A-210ENST00000470160 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
KDM3A-210ENST00000470160 FAT1Q14517 4588 aa4.03□□□□□ -1.76
KDM3A-210ENST00000470160 H3BPC8 53 aa4.02□□□□□ -1.77
KDM3A-210ENST00000470160 ROMO1P60602 79 aa4.02□□□□□ -1.77
KDM3A-210ENST00000470160 DEFB116Q30KQ4 102 aa4.02□□□□□ -1.77
KDM3A-210ENST00000470160 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
KDM3A-210ENST00000470160 ZCCHC13Q8WW36 166 aaKnown RBP4.02□□□□□ -1.77
KDM3A-210ENST00000470160 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
KDM3A-210ENST00000470160 TP53AIP1Q9HCN2 124 aa4.01□□□□□ -1.77
KDM3A-210ENST00000470160 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
KDM3A-210ENST00000470160 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
KDM3A-210ENST00000470160 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
KDM3A-210ENST00000470160 KRTAP10-8P60410 259 aa3.99□□□□□ -1.77
KDM3A-210ENST00000470160 MRPL34Q9BQ48 92 aaKnown RBP3.99□□□□□ -1.77
KDM3A-210ENST00000470160 TNXBP22105 4242 aa3.98□□□□□ -1.77
KDM3A-210ENST00000470160 LOC101927531A0A1B0GV80 90 aa3.97□□□□□ -1.77
KDM3A-210ENST00000470160 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
KDM3A-210ENST00000470160 WFDC13Q8IUB5 93 aa3.97□□□□□ -1.77
KDM3A-210ENST00000470160 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
KDM3A-210ENST00000470160 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.77
KDM3A-210ENST00000470160 Q5VSD8 79 aa3.96□□□□□ -1.77
KDM3A-210ENST00000470160 Q8N1X5 172 aa3.96□□□□□ -1.77
KDM3A-210ENST00000470160 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
KDM3A-210ENST00000470160 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
KDM3A-210ENST00000470160 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
KDM3A-210ENST00000470160 SPINK7P58062 85 aa3.93□□□□□ -1.78
KDM3A-210ENST00000470160 P0C880 135 aa3.93□□□□□ -1.78
KDM3A-210ENST00000470160 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
KDM3A-210ENST00000470160 H0Y9P7 68 aa3.91□□□□□ -1.78
KDM3A-210ENST00000470160 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
KDM3A-210ENST00000470160 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.78
KDM3A-210ENST00000470160 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
KDM3A-210ENST00000470160 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
KDM3A-210ENST00000470160 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
KDM3A-210ENST00000470160 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
KDM3A-210ENST00000470160 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
KDM3A-210ENST00000470160 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
KDM3A-210ENST00000470160 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms