RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HRES1P13985 223 aa8.21□□□□□ -1.09
BRAT1-203ENST00000467558 KRTAP21-3Q3LHN1 58 aa8.19□□□□□ -1.1
BRAT1-203ENST00000467558 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
BRAT1-203ENST00000467558 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
BRAT1-203ENST00000467558 MIR22HGQ0VDD5 57 aa8.18□□□□□ -1.1
BRAT1-203ENST00000467558 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
BRAT1-203ENST00000467558 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
BRAT1-203ENST00000467558 DMBT1Q9UGM3 2413 aaPredicted RBP8.16□□□□□ -1.1
BRAT1-203ENST00000467558 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
BRAT1-203ENST00000467558 Q1T7F1 81 aa8.15□□□□□ -1.11
BRAT1-203ENST00000467558 Q5VSD8 79 aa8.14□□□□□ -1.11
BRAT1-203ENST00000467558 Q5W150 140 aa8.14□□□□□ -1.11
BRAT1-203ENST00000467558 Q6ZSA8 131 aa8.13□□□□□ -1.11
BRAT1-203ENST00000467558 A0A087X002 238 aa8.12□□□□□ -1.11
BRAT1-203ENST00000467558 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
BRAT1-203ENST00000467558 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
BRAT1-203ENST00000467558 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
BRAT1-203ENST00000467558 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
BRAT1-203ENST00000467558 SPINK7P58062 85 aa8.04□□□□□ -1.12
BRAT1-203ENST00000467558 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
BRAT1-203ENST00000467558 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
BRAT1-203ENST00000467558 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
BRAT1-203ENST00000467558 ANK3Q12955 4377 aaKnown RBP8.02□□□□□ -1.13
BRAT1-203ENST00000467558 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
BRAT1-203ENST00000467558 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
BRAT1-203ENST00000467558 TGP01266 2768 aa8□□□□□ -1.13
BRAT1-203ENST00000467558 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
BRAT1-203ENST00000467558 Q75L30 129 aa7.98□□□□□ -1.13
BRAT1-203ENST00000467558 Q5XG85 94 aa7.97□□□□□ -1.13
BRAT1-203ENST00000467558 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
BRAT1-203ENST00000467558 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.14
BRAT1-203ENST00000467558 A0A1B0GU33 70 aa7.95□□□□□ -1.14
BRAT1-203ENST00000467558 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
BRAT1-203ENST00000467558 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
BRAT1-203ENST00000467558 A0A0D9SG42 100 aa7.93□□□□□ -1.14
BRAT1-203ENST00000467558 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
BRAT1-203ENST00000467558 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
BRAT1-203ENST00000467558 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
BRAT1-203ENST00000467558 OXTP01178 125 aa7.89□□□□□ -1.15
BRAT1-203ENST00000467558 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
BRAT1-203ENST00000467558 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
BRAT1-203ENST00000467558 KTN1-AS1Q86SY8 53 aa7.88□□□□□ -1.15
BRAT1-203ENST00000467558 S4R3F8 94 aa7.87□□□□□ -1.15
BRAT1-203ENST00000467558 Q5VV11 94 aa7.86□□□□□ -1.15
BRAT1-203ENST00000467558 LCA10Q71F78 164 aa7.77□□□□□ -1.17
BRAT1-203ENST00000467558 M0R2T5 61 aa7.74□□□□□ -1.17
BRAT1-203ENST00000467558 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
BRAT1-203ENST00000467558 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
BRAT1-203ENST00000467558 R4GN34 69 aa7.68□□□□□ -1.18
BRAT1-203ENST00000467558 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
BRAT1-203ENST00000467558 H1FX-AS1Q4G0G2 97 aa7.63□□□□□ -1.19
BRAT1-203ENST00000467558 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
BRAT1-203ENST00000467558 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
BRAT1-203ENST00000467558 A8MUU9 505 aa7.61□□□□□ -1.19
BRAT1-203ENST00000467558 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.19
BRAT1-203ENST00000467558 FBN3Q75N90 2809 aa7.59□□□□□ -1.19
BRAT1-203ENST00000467558 H3BS24 57 aa7.55□□□□□ -1.2
BRAT1-203ENST00000467558 M0QZ58 72 aa7.53□□□□□ -1.2
BRAT1-203ENST00000467558 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
BRAT1-203ENST00000467558 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
BRAT1-203ENST00000467558 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
BRAT1-203ENST00000467558 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
BRAT1-203ENST00000467558 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
BRAT1-203ENST00000467558 ROMO1P60602 79 aa7.43□□□□□ -1.22
BRAT1-203ENST00000467558 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
BRAT1-203ENST00000467558 XP32Q5T750 250 aa7.41□□□□□ -1.22
BRAT1-203ENST00000467558 A0A1B0GVY2 172 aa7.4□□□□□ -1.22
BRAT1-203ENST00000467558 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
BRAT1-203ENST00000467558 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
BRAT1-203ENST00000467558 A8MU10 97 aa7.32□□□□□ -1.24
BRAT1-203ENST00000467558 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
BRAT1-203ENST00000467558 LUZP6Q538Z0 58 aa7.32□□□□□ -1.24
BRAT1-203ENST00000467558 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
BRAT1-203ENST00000467558 A6NN06 94 aa7.28□□□□□ -1.24
BRAT1-203ENST00000467558 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
BRAT1-203ENST00000467558 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
BRAT1-203ENST00000467558 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
BRAT1-203ENST00000467558 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
BRAT1-203ENST00000467558 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
BRAT1-203ENST00000467558 H0YAA0 97 aa7.03□□□□□ -1.28
BRAT1-203ENST00000467558 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
BRAT1-203ENST00000467558 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
BRAT1-203ENST00000467558 ANK2Q01484 3957 aa6.99□□□□□ -1.29
BRAT1-203ENST00000467558 TNP1P09430 55 aa6.95□□□□□ -1.3
BRAT1-203ENST00000467558 P0C880 135 aa6.95□□□□□ -1.3
BRAT1-203ENST00000467558 PRKDCP78527 4128 aaKnown RBP6.91□□□□□ -1.3
BRAT1-203ENST00000467558 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
BRAT1-203ENST00000467558 STARD9Q9P2P6 4700 aa6.9□□□□□ -1.3
BRAT1-203ENST00000467558 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
BRAT1-203ENST00000467558 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
BRAT1-203ENST00000467558 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
BRAT1-203ENST00000467558 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
BRAT1-203ENST00000467558 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
BRAT1-203ENST00000467558 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
BRAT1-203ENST00000467558 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
BRAT1-203ENST00000467558 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
BRAT1-203ENST00000467558 DNAH5Q8TE73 4624 aa6.78□□□□□ -1.32
BRAT1-203ENST00000467558 LYSTQ99698 3801 aa6.75□□□□□ -1.33
BRAT1-203ENST00000467558 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
BRAT1-203ENST00000467558 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms