RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
SNAPC3-205ENST00000467062 NBDYA0A0U1RRE5 68 aa11□□□□□ -0.65
SNAPC3-205ENST00000467062 TGP01266 2768 aa10.98□□□□□ -0.65
SNAPC3-205ENST00000467062 DNHD1Q96M86 4753 aa10.95□□□□□ -0.66
SNAPC3-205ENST00000467062 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
SNAPC3-205ENST00000467062 FRAS1Q86XX4 4008 aa10.94□□□□□ -0.66
SNAPC3-205ENST00000467062 DNAH2Q9P225 4427 aa10.94□□□□□ -0.66
SNAPC3-205ENST00000467062 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
SNAPC3-205ENST00000467062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
SNAPC3-205ENST00000467062 RTL8CO15255 209 aa10.91□□□□□ -0.66
SNAPC3-205ENST00000467062 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
SNAPC3-205ENST00000467062 VPS13DQ5THJ4 4388 aa10.9□□□□□ -0.66
SNAPC3-205ENST00000467062 SPRR1BP22528 89 aa10.9□□□□□ -0.66
SNAPC3-205ENST00000467062 NUPR2A6NF83 97 aa10.88□□□□□ -0.67
SNAPC3-205ENST00000467062 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
SNAPC3-205ENST00000467062 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
SNAPC3-205ENST00000467062 SPATA8Q6RVD6 105 aa10.85□□□□□ -0.67
SNAPC3-205ENST00000467062 ACYP2P14621 99 aa10.83□□□□□ -0.68
SNAPC3-205ENST00000467062 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
SNAPC3-205ENST00000467062 FBN3Q75N90 2809 aa10.8□□□□□ -0.68
SNAPC3-205ENST00000467062 A0A087WTM6 91 aa10.8□□□□□ -0.68
SNAPC3-205ENST00000467062 ANAPC11Q9NYG5 84 aa10.8□□□□□ -0.68
SNAPC3-205ENST00000467062 A0A1B0GU69 56 aa10.79□□□□□ -0.68
SNAPC3-205ENST00000467062 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
SNAPC3-205ENST00000467062 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
SNAPC3-205ENST00000467062 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
SNAPC3-205ENST00000467062 MRPL34Q9BQ48 92 aaKnown RBP10.78□□□□□ -0.68
SNAPC3-205ENST00000467062 Q96NJ1 140 aa10.78□□□□□ -0.68
SNAPC3-205ENST00000467062 KRTAP13-1Q8IUC0 172 aa10.77□□□□□ -0.68
SNAPC3-205ENST00000467062 DNAH17Q9UFH2 4485 aa10.77□□□□□ -0.68
SNAPC3-205ENST00000467062 A0A1B0GVX0 72 aa10.75□□□□□ -0.69
SNAPC3-205ENST00000467062 IGHV6-1A0A0B4J1U7 121 aa10.75□□□□□ -0.69
SNAPC3-205ENST00000467062 MIR22HGQ0VDD5 57 aa10.74□□□□□ -0.69
SNAPC3-205ENST00000467062 CSAG1Q6PB30 78 aa10.74□□□□□ -0.69
SNAPC3-205ENST00000467062 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
SNAPC3-205ENST00000467062 CDK2AP2O75956 126 aa10.73□□□□□ -0.69
SNAPC3-205ENST00000467062 UQCR11O14957 56 aa10.72□□□□□ -0.69
SNAPC3-205ENST00000467062 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
SNAPC3-205ENST00000467062 DMAC1Q96GE9 116 aa10.65□□□□□ -0.7
SNAPC3-205ENST00000467062 LY6G6CO95867 125 aa10.65□□□□□ -0.71
SNAPC3-205ENST00000467062 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
SNAPC3-205ENST00000467062 ALMS1Q8TCU4 4167 aa10.63□□□□□ -0.71
SNAPC3-205ENST00000467062 DNAH11Q96DT5 4516 aa10.63□□□□□ -0.71
SNAPC3-205ENST00000467062 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
SNAPC3-205ENST00000467062 WWC2-AS2Q96NR7 200 aa10.6□□□□□ -0.71
SNAPC3-205ENST00000467062 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
SNAPC3-205ENST00000467062 Q5W150 140 aa10.59□□□□□ -0.71
SNAPC3-205ENST00000467062 ZNF861PO60384 105 aa10.57□□□□□ -0.72
SNAPC3-205ENST00000467062 DNAH5Q8TE73 4624 aa10.57□□□□□ -0.72
SNAPC3-205ENST00000467062 LINC00483Q53H64 154 aa10.56□□□□□ -0.72
SNAPC3-205ENST00000467062 NOTCH2NLQ7Z3S9 236 aa10.56□□□□□ -0.72
SNAPC3-205ENST00000467062 HYDINQ4G0P3 5121 aa10.56□□□□□ -0.72
SNAPC3-205ENST00000467062 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
SNAPC3-205ENST00000467062 LRP1BQ9NZR2 4599 aa10.52□□□□□ -0.73
SNAPC3-205ENST00000467062 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
SNAPC3-205ENST00000467062 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
SNAPC3-205ENST00000467062 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
SNAPC3-205ENST00000467062 IGLV7-43P04211 117 aa10.47□□□□□ -0.73
SNAPC3-205ENST00000467062 ROMO1P60602 79 aa10.41□□□□□ -0.74
SNAPC3-205ENST00000467062 FAT2Q9NYQ8 4349 aa10.4□□□□□ -0.75
SNAPC3-205ENST00000467062 PKD1P98161 4303 aa10.39□□□□□ -0.75
SNAPC3-205ENST00000467062 KRTAP25-1Q3LHN0 102 aa10.38□□□□□ -0.75
SNAPC3-205ENST00000467062 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
SNAPC3-205ENST00000467062 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
SNAPC3-205ENST00000467062 IGKV2-30P06310 120 aa10.35□□□□□ -0.75
SNAPC3-205ENST00000467062 VPS13BQ7Z7G8 4022 aa10.34□□□□□ -0.75
SNAPC3-205ENST00000467062 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
SNAPC3-205ENST00000467062 A8MUU9 505 aa10.26□□□□□ -0.77
SNAPC3-205ENST00000467062 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
SNAPC3-205ENST00000467062 SSBP3-AS1Q7Z2R9 100 aa10.21□□□□□ -0.77
SNAPC3-205ENST00000467062 Q6ZSA8 131 aa10.2□□□□□ -0.78
SNAPC3-205ENST00000467062 LINC00304Q8N9R0 145 aa10.19□□□□□ -0.78
SNAPC3-205ENST00000467062 IGKV2D-30A0A075B6S6 120 aa10.16□□□□□ -0.78
SNAPC3-205ENST00000467062 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
SNAPC3-205ENST00000467062 KRTAP1-4P0C5Y4 121 aa10.14□□□□□ -0.79
SNAPC3-205ENST00000467062 H0YAA0 97 aa10.11□□□□□ -0.79
SNAPC3-205ENST00000467062 FAT1Q14517 4588 aa10.1□□□□□ -0.79
SNAPC3-205ENST00000467062 SPINK1P00995 79 aa10.09□□□□□ -0.79
SNAPC3-205ENST00000467062 P0C880 135 aa10.08□□□□□ -0.8
SNAPC3-205ENST00000467062 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
SNAPC3-205ENST00000467062 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.8
SNAPC3-205ENST00000467062 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
SNAPC3-205ENST00000467062 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
SNAPC3-205ENST00000467062 A0A1B0GU33 70 aa9.99□□□□□ -0.81
SNAPC3-205ENST00000467062 K7ERS5 55 aa9.96□□□□□ -0.81
SNAPC3-205ENST00000467062 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.82
SNAPC3-205ENST00000467062 Q8N1X5 172 aa9.92□□□□□ -0.82
SNAPC3-205ENST00000467062 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
SNAPC3-205ENST00000467062 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
SNAPC3-205ENST00000467062 A0A0A0MQY5 61 aa9.91□□□□□ -0.82
SNAPC3-205ENST00000467062 KMT2CQ8NEZ4 4911 aaKnown RBP9.9□□□□□ -0.82
SNAPC3-205ENST00000467062 APOBP04114 4563 aaKnown RBP9.86□□□□□ -0.83
SNAPC3-205ENST00000467062 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
SNAPC3-205ENST00000467062 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
SNAPC3-205ENST00000467062 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
SNAPC3-205ENST00000467062 RYR2Q92736 4967 aa9.76□□□□□ -0.85
SNAPC3-205ENST00000467062 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
SNAPC3-205ENST00000467062 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
SNAPC3-205ENST00000467062 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.86
SNAPC3-205ENST00000467062 NDUFAF8A1L188 74 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms