RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
UFD1-206ENST00000466373 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
UFD1-206ENST00000466373 H3BPC8 53 aa6.15□□□□□ -1.43
UFD1-206ENST00000466373 PSPHP1O15172 72 aa6.15□□□□□ -1.43
UFD1-206ENST00000466373 PKD1P98161 4303 aa6.15□□□□□ -1.43
UFD1-206ENST00000466373 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
UFD1-206ENST00000466373 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
UFD1-206ENST00000466373 MRPL34Q9BQ48 92 aaKnown RBP6.12□□□□□ -1.43
UFD1-206ENST00000466373 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
UFD1-206ENST00000466373 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
UFD1-206ENST00000466373 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
UFD1-206ENST00000466373 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
UFD1-206ENST00000466373 CD164Q04900 197 aa6.11□□□□□ -1.43
UFD1-206ENST00000466373 Q1T7F1 81 aa6.1□□□□□ -1.43
UFD1-206ENST00000466373 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
UFD1-206ENST00000466373 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
UFD1-206ENST00000466373 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
UFD1-206ENST00000466373 A8MUN3 132 aa6.07□□□□□ -1.44
UFD1-206ENST00000466373 Q5W150 140 aa6.06□□□□□ -1.44
UFD1-206ENST00000466373 COA5Q86WW8 74 aa6.06□□□□□ -1.44
UFD1-206ENST00000466373 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
UFD1-206ENST00000466373 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
UFD1-206ENST00000466373 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
UFD1-206ENST00000466373 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
UFD1-206ENST00000466373 Q6ZSA8 131 aa6.02□□□□□ -1.45
UFD1-206ENST00000466373 SACSQ9NZJ4 4579 aa6.01□□□□□ -1.45
UFD1-206ENST00000466373 PRR15LQ9BU68 103 aa6□□□□□ -1.45
UFD1-206ENST00000466373 LINC00313P59037 77 aa6□□□□□ -1.45
UFD1-206ENST00000466373 C1orf195Q5TG92 126 aa6□□□□□ -1.45
UFD1-206ENST00000466373 Q5VV11 94 aa6□□□□□ -1.45
UFD1-206ENST00000466373 V9GYY9 64 aa6□□□□□ -1.45
UFD1-206ENST00000466373 A8MU10 97 aa5.99□□□□□ -1.45
UFD1-206ENST00000466373 SPAG11AQ6PDA7 123 aa5.98□□□□□ -1.45
UFD1-206ENST00000466373 HRES1P13985 223 aa5.98□□□□□ -1.45
UFD1-206ENST00000466373 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
UFD1-206ENST00000466373 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
UFD1-206ENST00000466373 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
UFD1-206ENST00000466373 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
UFD1-206ENST00000466373 LIMD2Q9BT23 127 aa5.97□□□□□ -1.45
UFD1-206ENST00000466373 C8orf87E5RJ46 101 aa5.96□□□□□ -1.45
UFD1-206ENST00000466373 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.45
UFD1-206ENST00000466373 FAT1Q14517 4588 aa5.95□□□□□ -1.46
UFD1-206ENST00000466373 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
UFD1-206ENST00000466373 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
UFD1-206ENST00000466373 C4orf48Q5BLP8 95 aa5.92□□□□□ -1.46
UFD1-206ENST00000466373 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
UFD1-206ENST00000466373 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
UFD1-206ENST00000466373 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
UFD1-206ENST00000466373 A6NED7 52 aa5.9□□□□□ -1.47
UFD1-206ENST00000466373 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
UFD1-206ENST00000466373 IGKV2D-30A0A075B6S6 120 aa5.88□□□□□ -1.47
UFD1-206ENST00000466373 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
UFD1-206ENST00000466373 Q75L30 129 aa5.87□□□□□ -1.47
UFD1-206ENST00000466373 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
UFD1-206ENST00000466373 ACYP2P14621 99 aa5.86□□□□□ -1.47
UFD1-206ENST00000466373 LCA10Q71F78 164 aa5.85□□□□□ -1.47
UFD1-206ENST00000466373 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
UFD1-206ENST00000466373 SPINK1P00995 79 aa5.84□□□□□ -1.47
UFD1-206ENST00000466373 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
UFD1-206ENST00000466373 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
UFD1-206ENST00000466373 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
UFD1-206ENST00000466373 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
UFD1-206ENST00000466373 SPINK7P58062 85 aa5.82□□□□□ -1.48
UFD1-206ENST00000466373 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
UFD1-206ENST00000466373 RYR2Q92736 4967 aa5.77□□□□□ -1.49
UFD1-206ENST00000466373 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
UFD1-206ENST00000466373 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
UFD1-206ENST00000466373 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
UFD1-206ENST00000466373 KRTAP21-3Q3LHN1 58 aa5.76□□□□□ -1.49
UFD1-206ENST00000466373 Q8N1X5 172 aa5.74□□□□□ -1.49
UFD1-206ENST00000466373 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
UFD1-206ENST00000466373 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
UFD1-206ENST00000466373 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
UFD1-206ENST00000466373 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
UFD1-206ENST00000466373 A0A1B0GU69 56 aa5.72□□□□□ -1.49
UFD1-206ENST00000466373 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.5
UFD1-206ENST00000466373 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
UFD1-206ENST00000466373 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
UFD1-206ENST00000466373 A6NN06 94 aa5.66□□□□□ -1.5
UFD1-206ENST00000466373 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
UFD1-206ENST00000466373 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
UFD1-206ENST00000466373 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
UFD1-206ENST00000466373 A8MUU9 505 aa5.62□□□□□ -1.51
UFD1-206ENST00000466373 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
UFD1-206ENST00000466373 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
UFD1-206ENST00000466373 RYR3Q15413 4870 aa5.62□□□□□ -1.51
UFD1-206ENST00000466373 TNXBP22105 4242 aa5.61□□□□□ -1.51
UFD1-206ENST00000466373 HSPG2P98160 4391 aa5.6□□□□□ -1.51
UFD1-206ENST00000466373 UQCR11O14957 56 aa5.59□□□□□ -1.52
UFD1-206ENST00000466373 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
UFD1-206ENST00000466373 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
UFD1-206ENST00000466373 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
UFD1-206ENST00000466373 SEC61GP60059 68 aa5.55□□□□□ -1.52
UFD1-206ENST00000466373 RYR1P21817 5038 aa5.53□□□□□ -1.52
UFD1-206ENST00000466373 KIAA1109Q2LD37 5005 aa5.53□□□□□ -1.52
UFD1-206ENST00000466373 Q5VSD8 79 aa5.53□□□□□ -1.52
UFD1-206ENST00000466373 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
UFD1-206ENST00000466373 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
UFD1-206ENST00000466373 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
UFD1-206ENST00000466373 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms