RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
ATF3-208ENST00000465155 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
ATF3-208ENST00000465155 Q6ZVQ6 151 aa7.59□□□□□ -1.19
ATF3-208ENST00000465155 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
ATF3-208ENST00000465155 Q96NJ1 140 aa7.58□□□□□ -1.2
ATF3-208ENST00000465155 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
ATF3-208ENST00000465155 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
ATF3-208ENST00000465155 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
ATF3-208ENST00000465155 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
ATF3-208ENST00000465155 ATP5EP2Q5VTU8 51 aa7.52□□□□□ -1.2
ATF3-208ENST00000465155 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
ATF3-208ENST00000465155 BPY2O14599 106 aa7.52□□□□□ -1.21
ATF3-208ENST00000465155 J3KT08 172 aa7.51□□□□□ -1.21
ATF3-208ENST00000465155 PRR4Q16378 134 aa7.5□□□□□ -1.21
ATF3-208ENST00000465155 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
ATF3-208ENST00000465155 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
ATF3-208ENST00000465155 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
ATF3-208ENST00000465155 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
ATF3-208ENST00000465155 DSCR10P59022 87 aa7.47□□□□□ -1.21
ATF3-208ENST00000465155 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.21
ATF3-208ENST00000465155 A8MWP4 228 aa7.46□□□□□ -1.21
ATF3-208ENST00000465155 ATOX1O00244 68 aa7.46□□□□□ -1.21
ATF3-208ENST00000465155 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
ATF3-208ENST00000465155 CXCL6P80162 114 aa7.45□□□□□ -1.22
ATF3-208ENST00000465155 NDUFB1O75438 58 aa7.45□□□□□ -1.22
ATF3-208ENST00000465155 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
ATF3-208ENST00000465155 K7EQZ3 153 aa7.44□□□□□ -1.22
ATF3-208ENST00000465155 Q8N9L7 120 aa7.44□□□□□ -1.22
ATF3-208ENST00000465155 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
ATF3-208ENST00000465155 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
ATF3-208ENST00000465155 UQCRQO14949 82 aa7.42□□□□□ -1.22
ATF3-208ENST00000465155 HIST1H4AP62805 103 aaKnown RBP7.42□□□□□ -1.22
ATF3-208ENST00000465155 HERC1Q15751 4861 aa7.42□□□□□ -1.22
ATF3-208ENST00000465155 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
ATF3-208ENST00000465155 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
ATF3-208ENST00000465155 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
ATF3-208ENST00000465155 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
ATF3-208ENST00000465155 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
ATF3-208ENST00000465155 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
ATF3-208ENST00000465155 COX7CP15954 63 aa7.38□□□□□ -1.23
ATF3-208ENST00000465155 LINC00313P59037 77 aa7.38□□□□□ -1.23
ATF3-208ENST00000465155 C8orf87E5RJ46 101 aa7.37□□□□□ -1.23
ATF3-208ENST00000465155 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
ATF3-208ENST00000465155 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
ATF3-208ENST00000465155 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
ATF3-208ENST00000465155 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.24
ATF3-208ENST00000465155 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.24
ATF3-208ENST00000465155 A0A087WVE0 104 aa7.31□□□□□ -1.24
ATF3-208ENST00000465155 WFDC13Q8IUB5 93 aa7.31□□□□□ -1.24
ATF3-208ENST00000465155 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
ATF3-208ENST00000465155 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
ATF3-208ENST00000465155 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
ATF3-208ENST00000465155 LPAP08519 4548 aa7.3□□□□□ -1.24
ATF3-208ENST00000465155 CASC2Q6XLA1 102 aa7.3□□□□□ -1.24
ATF3-208ENST00000465155 TMEM254Q8TBM7 123 aa7.27□□□□□ -1.25
ATF3-208ENST00000465155 HMCN2Q8NDA2 5059 aa7.27□□□□□ -1.25
ATF3-208ENST00000465155 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
ATF3-208ENST00000465155 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
ATF3-208ENST00000465155 TMEM258P61165 79 aa7.23□□□□□ -1.25
ATF3-208ENST00000465155 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
ATF3-208ENST00000465155 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
ATF3-208ENST00000465155 A8MUU9 505 aa7.23□□□□□ -1.25
ATF3-208ENST00000465155 NDUFS5O43920 106 aa7.22□□□□□ -1.25
ATF3-208ENST00000465155 Q75L30 129 aa7.22□□□□□ -1.25
ATF3-208ENST00000465155 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
ATF3-208ENST00000465155 LRP2P98164 4655 aa7.21□□□□□ -1.26
ATF3-208ENST00000465155 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
ATF3-208ENST00000465155 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
ATF3-208ENST00000465155 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
ATF3-208ENST00000465155 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
ATF3-208ENST00000465155 ATP11AUNQ6ZP68 121 aa7.16□□□□□ -1.26
ATF3-208ENST00000465155 NDUFC1O43677 76 aa7.15□□□□□ -1.27
ATF3-208ENST00000465155 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
ATF3-208ENST00000465155 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
ATF3-208ENST00000465155 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
ATF3-208ENST00000465155 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
ATF3-208ENST00000465155 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
ATF3-208ENST00000465155 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
ATF3-208ENST00000465155 Q5W150 140 aa7.09□□□□□ -1.27
ATF3-208ENST00000465155 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
ATF3-208ENST00000465155 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
ATF3-208ENST00000465155 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
ATF3-208ENST00000465155 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
ATF3-208ENST00000465155 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
ATF3-208ENST00000465155 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
ATF3-208ENST00000465155 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
ATF3-208ENST00000465155 H7BZZ5 65 aa7.02□□□□□ -1.29
ATF3-208ENST00000465155 H0Y9P7 68 aa7.01□□□□□ -1.29
ATF3-208ENST00000465155 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
ATF3-208ENST00000465155 SERP1Q9Y6X1 66 aa7.01□□□□□ -1.29
ATF3-208ENST00000465155 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
ATF3-208ENST00000465155 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
ATF3-208ENST00000465155 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
ATF3-208ENST00000465155 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
ATF3-208ENST00000465155 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
ATF3-208ENST00000465155 SPINK7P58062 85 aa6.98□□□□□ -1.29
ATF3-208ENST00000465155 A0A0U1RQV1 116 aa6.97□□□□□ -1.29
ATF3-208ENST00000465155 MP68P56378 58 aa6.97□□□□□ -1.29
ATF3-208ENST00000465155 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
ATF3-208ENST00000465155 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms