RNA–Protein interactions for RNA: ENST00000462392.5

IMP4-210, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 1,793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-210ENST00000462392 SMIM20Q8N5G0 67 aa11.69□□□□□ -0.54
IMP4-210ENST00000462392 KRTAP29-1A8MX34 341 aaPredicted RBP11.69□□□□□ -0.54
IMP4-210ENST00000462392 COX7CP15954 63 aa11.69□□□□□ -0.54
IMP4-210ENST00000462392 CASC2Q6XLA1 102 aa11.69□□□□□ -0.54
IMP4-210ENST00000462392 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
IMP4-210ENST00000462392 TRAV7A0A075B6U4 112 aa11.67□□□□□ -0.54
IMP4-210ENST00000462392 C8orf17Q9NRJ1 99 aa11.67□□□□□ -0.54
IMP4-210ENST00000462392 UQCRQO14949 82 aa11.65□□□□□ -0.54
IMP4-210ENST00000462392 OCR1Q9BZK8 76 aa11.65□□□□□ -0.54
IMP4-210ENST00000462392 NOTCH2NLQ7Z3S9 236 aa11.64□□□□□ -0.55
IMP4-210ENST00000462392 hDV103S1A0JD37 113 aa11.63□□□□□ -0.55
IMP4-210ENST00000462392 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
IMP4-210ENST00000462392 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
IMP4-210ENST00000462392 FLG2Q5D862 2391 aaPredicted RBP11.59□□□□□ -0.55
IMP4-210ENST00000462392 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
IMP4-210ENST00000462392 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
IMP4-210ENST00000462392 LINC00313P59037 77 aa11.52□□□□□ -0.57
IMP4-210ENST00000462392 MRPL34Q9BQ48 92 aaKnown RBP11.52□□□□□ -0.57
IMP4-210ENST00000462392 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
IMP4-210ENST00000462392 KRTAP4-5Q9BYR2 181 aa11.51□□□□□ -0.57
IMP4-210ENST00000462392 TNXBP22105 4242 aa11.51□□□□□ -0.57
IMP4-210ENST00000462392 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
IMP4-210ENST00000462392 MT1HL1P0DM35 61 aa11.48□□□□□ -0.57
IMP4-210ENST00000462392 RETNLBQ9BQ08 111 aa11.48□□□□□ -0.57
IMP4-210ENST00000462392 NDUFS5O43920 106 aa11.46□□□□□ -0.58
IMP4-210ENST00000462392 CYSTM1Q9H1C7 97 aa11.45□□□□□ -0.58
IMP4-210ENST00000462392 MYCBP2O75592 4640 aa11.45□□□□□ -0.58
IMP4-210ENST00000462392 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
IMP4-210ENST00000462392 C5orf47Q569G3 176 aa11.43□□□□□ -0.58
IMP4-210ENST00000462392 TP53AIP1Q9HCN2 124 aa11.42□□□□□ -0.58
IMP4-210ENST00000462392 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
IMP4-210ENST00000462392 KLKP1Q107X0 134 aa11.41□□□□□ -0.58
IMP4-210ENST00000462392 OXTP01178 125 aa11.4□□□□□ -0.58
IMP4-210ENST00000462392 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
IMP4-210ENST00000462392 A0A0U1RQV1 116 aa11.39□□□□□ -0.59
IMP4-210ENST00000462392 BIRC6Q9NR09 4857 aa11.37□□□□□ -0.59
IMP4-210ENST00000462392 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
IMP4-210ENST00000462392 H0Y9P7 68 aa11.36□□□□□ -0.59
IMP4-210ENST00000462392 MP68P56378 58 aa11.36□□□□□ -0.59
IMP4-210ENST00000462392 TRAV22A0A0B4J277 110 aa11.35□□□□□ -0.59
IMP4-210ENST00000462392 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
IMP4-210ENST00000462392 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
IMP4-210ENST00000462392 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
IMP4-210ENST00000462392 H7BZZ5 65 aa11.28□□□□□ -0.6
IMP4-210ENST00000462392 Q5W150 140 aa11.28□□□□□ -0.6
IMP4-210ENST00000462392 H3BPC8 53 aa11.27□□□□□ -0.61
IMP4-210ENST00000462392 FP248Q71RG6 208 aaPredicted RBP11.27□□□□□ -0.61
IMP4-210ENST00000462392 HERC2O95714 4834 aa11.26□□□□□ -0.61
IMP4-210ENST00000462392 NDUFC1O43677 76 aa11.26□□□□□ -0.61
IMP4-210ENST00000462392 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
IMP4-210ENST00000462392 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
IMP4-210ENST00000462392 ABCA13Q86UQ4 5058 aa11.22□□□□□ -0.61
IMP4-210ENST00000462392 TMEM258P61165 79 aa11.21□□□□□ -0.62
IMP4-210ENST00000462392 IGLV7-46A0A075B6I9 117 aa11.2□□□□□ -0.62
IMP4-210ENST00000462392 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
IMP4-210ENST00000462392 A8MUU9 505 aa11.16□□□□□ -0.62
IMP4-210ENST00000462392 PRR4Q16378 134 aa11.13□□□□□ -0.63
IMP4-210ENST00000462392 J3QL48 77 aa11.13□□□□□ -0.63
IMP4-210ENST00000462392 LOC101927531A0A1B0GV80 90 aa11.12□□□□□ -0.63
IMP4-210ENST00000462392 FAM236DA0A1B0GTK5 79 aa11.1□□□□□ -0.63
IMP4-210ENST00000462392 FAM236CP0DP71 79 aa11.1□□□□□ -0.63
IMP4-210ENST00000462392 PCOTHQ58A44 107 aa11.07□□□□□ -0.64
IMP4-210ENST00000462392 Q75L30 129 aa11.06□□□□□ -0.64
IMP4-210ENST00000462392 CYP4F30PQ9H0H9 118 aa11.06□□□□□ -0.64
IMP4-210ENST00000462392 IGKV2-30P06310 120 aa11.04□□□□□ -0.64
IMP4-210ENST00000462392 XP32Q5T750 250 aa11.02□□□□□ -0.65
IMP4-210ENST00000462392 ATP5EP56381 51 aaPredicted RBP11□□□□□ -0.65
IMP4-210ENST00000462392 IGKV2D-30A0A075B6S6 120 aa11□□□□□ -0.65
IMP4-210ENST00000462392 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
IMP4-210ENST00000462392 SPANXA2-OT1Q8N9U9 137 aa10.98□□□□□ -0.65
IMP4-210ENST00000462392 RPL37P61927 97 aaKnown RBP10.95□□□□□ -0.66
IMP4-210ENST00000462392 ATP11AUNQ6ZP68 121 aa10.92□□□□□ -0.66
IMP4-210ENST00000462392 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
IMP4-210ENST00000462392 HRES1P13985 223 aa10.89□□□□□ -0.67
IMP4-210ENST00000462392 SERP1Q9Y6X1 66 aa10.86□□□□□ -0.67
IMP4-210ENST00000462392 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
IMP4-210ENST00000462392 SPINK7P58062 85 aa10.83□□□□□ -0.68
IMP4-210ENST00000462392 PCLOQ9Y6V0 5065 aa10.82□□□□□ -0.68
IMP4-210ENST00000462392 LPAP08519 4548 aa10.79□□□□□ -0.68
IMP4-210ENST00000462392 LRP2P98164 4655 aa10.73□□□□□ -0.69
IMP4-210ENST00000462392 C4orf26Q17RF5 130 aa10.72□□□□□ -0.69
IMP4-210ENST00000462392 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
IMP4-210ENST00000462392 COA5Q86WW8 74 aa10.67□□□□□ -0.7
IMP4-210ENST00000462392 ACYP2P14621 99 aa10.66□□□□□ -0.7
IMP4-210ENST00000462392 HERC1Q15751 4861 aa10.59□□□□□ -0.71
IMP4-210ENST00000462392 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
IMP4-210ENST00000462392 SMIM26A0A096LP01 95 aa10.58□□□□□ -0.72
IMP4-210ENST00000462392 A8MUN3 132 aa10.57□□□□□ -0.72
IMP4-210ENST00000462392 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
IMP4-210ENST00000462392 COX6B2Q6YFQ2 88 aa10.55□□□□□ -0.72
IMP4-210ENST00000462392 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
IMP4-210ENST00000462392 HMCN2Q8NDA2 5059 aa10.46□□□□□ -0.73
IMP4-210ENST00000462392 MPLKIPQ8TAP9 179 aa10.44□□□□□ -0.74
IMP4-210ENST00000462392 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.74
IMP4-210ENST00000462392 Q1T7F1 81 aa10.37□□□□□ -0.75
IMP4-210ENST00000462392 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
IMP4-210ENST00000462392 MUC17Q685J3 4493 aa10.35□□□□□ -0.75
IMP4-210ENST00000462392 V9GYY9 64 aa10.3□□□□□ -0.76
IMP4-210ENST00000462392 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
IMP4-210ENST00000462392 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms