RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 C8orf87E5RJ46 101 aa8.79□□□□□ -1
NCL-207ENST00000461347 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
NCL-207ENST00000461347 DMBT1Q9UGM3 2413 aaPredicted RBP8.78□□□□□ -1
NCL-207ENST00000461347 Q75L30 129 aa8.76□□□□□ -1.01
NCL-207ENST00000461347 IGLV7-43P04211 117 aa8.76□□□□□ -1.01
NCL-207ENST00000461347 SSBP3-AS1Q7Z2R9 100 aa8.75□□□□□ -1.01
NCL-207ENST00000461347 ANK2Q01484 3957 aa8.74□□□□□ -1.01
NCL-207ENST00000461347 HRES1P13985 223 aa8.73□□□□□ -1.01
NCL-207ENST00000461347 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
NCL-207ENST00000461347 LINC01558Q9Y6Z2 57 aa8.71□□□□□ -1.02
NCL-207ENST00000461347 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
NCL-207ENST00000461347 Q96NJ1 140 aa8.7□□□□□ -1.02
NCL-207ENST00000461347 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
NCL-207ENST00000461347 UQCR11O14957 56 aa8.68□□□□□ -1.02
NCL-207ENST00000461347 SPINK7P58062 85 aa8.68□□□□□ -1.02
NCL-207ENST00000461347 K7ERS5 55 aa8.66□□□□□ -1.02
NCL-207ENST00000461347 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
NCL-207ENST00000461347 A0A087X002 238 aa8.65□□□□□ -1.02
NCL-207ENST00000461347 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
NCL-207ENST00000461347 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
NCL-207ENST00000461347 MIR22HGQ0VDD5 57 aa8.64□□□□□ -1.03
NCL-207ENST00000461347 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
NCL-207ENST00000461347 Q6ZR54 194 aa8.61□□□□□ -1.03
NCL-207ENST00000461347 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
NCL-207ENST00000461347 TRRAPQ9Y4A5 3859 aa8.6□□□□□ -1.03
NCL-207ENST00000461347 TENM2Q9NT68 2774 aa8.59□□□□□ -1.03
NCL-207ENST00000461347 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
NCL-207ENST00000461347 Q8N1X5 172 aa8.57□□□□□ -1.04
NCL-207ENST00000461347 Q5W150 140 aa8.56□□□□□ -1.04
NCL-207ENST00000461347 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
NCL-207ENST00000461347 SRRM2Q9UQ35 2752 aaKnown RBP8.53□□□□□ -1.04
NCL-207ENST00000461347 A6NN06 94 aa8.52□□□□□ -1.05
NCL-207ENST00000461347 Q6ZRN7 208 aaPredicted RBP8.52□□□□□ -1.05
NCL-207ENST00000461347 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
NCL-207ENST00000461347 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
NCL-207ENST00000461347 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
NCL-207ENST00000461347 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.06
NCL-207ENST00000461347 TGP01266 2768 aa8.44□□□□□ -1.06
NCL-207ENST00000461347 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
NCL-207ENST00000461347 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
NCL-207ENST00000461347 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
NCL-207ENST00000461347 DYNC2H1Q8NCM8 4307 aaKnown RBP8.39□□□□□ -1.07
NCL-207ENST00000461347 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
NCL-207ENST00000461347 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
NCL-207ENST00000461347 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
NCL-207ENST00000461347 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
NCL-207ENST00000461347 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
NCL-207ENST00000461347 DNAH7Q8WXX0 4024 aa8.26□□□□□ -1.09
NCL-207ENST00000461347 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
NCL-207ENST00000461347 DNAH9Q9NYC9 4486 aa8.26□□□□□ -1.09
NCL-207ENST00000461347 A0A1B0GU33 70 aa8.25□□□□□ -1.09
NCL-207ENST00000461347 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
NCL-207ENST00000461347 COL7A1Q02388 2944 aa8.21□□□□□ -1.09
NCL-207ENST00000461347 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
NCL-207ENST00000461347 A0A0D9SG42 100 aa8.18□□□□□ -1.1
NCL-207ENST00000461347 PRKDCP78527 4128 aaKnown RBP8.15□□□□□ -1.1
NCL-207ENST00000461347 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
NCL-207ENST00000461347 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
NCL-207ENST00000461347 LYSTQ99698 3801 aa8.09□□□□□ -1.11
NCL-207ENST00000461347 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
NCL-207ENST00000461347 MEGF8Q7Z7M0 2845 aa8.03□□□□□ -1.12
NCL-207ENST00000461347 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
NCL-207ENST00000461347 H1FX-AS1Q4G0G2 97 aa8.01□□□□□ -1.13
NCL-207ENST00000461347 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
NCL-207ENST00000461347 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
NCL-207ENST00000461347 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
NCL-207ENST00000461347 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.13
NCL-207ENST00000461347 PLECQ15149 4684 aaKnown RBP7.96□□□□□ -1.13
NCL-207ENST00000461347 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.13
NCL-207ENST00000461347 ROMO1P60602 79 aa7.96□□□□□ -1.14
NCL-207ENST00000461347 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
NCL-207ENST00000461347 Q6ZSA8 131 aa7.93□□□□□ -1.14
NCL-207ENST00000461347 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.14
NCL-207ENST00000461347 NDUFAF8A1L188 74 aa7.9□□□□□ -1.15
NCL-207ENST00000461347 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
NCL-207ENST00000461347 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
NCL-207ENST00000461347 DNAH10Q8IVF4 4471 aa7.88□□□□□ -1.15
NCL-207ENST00000461347 RPS29P62273 56 aaKnown RBP7.86□□□□□ -1.15
NCL-207ENST00000461347 S4R3F8 94 aa7.85□□□□□ -1.15
NCL-207ENST00000461347 DNAH2Q9P225 4427 aa7.83□□□□□ -1.16
NCL-207ENST00000461347 A8MUU9 505 aa7.81□□□□□ -1.16
NCL-207ENST00000461347 H0YAA0 97 aa7.81□□□□□ -1.16
NCL-207ENST00000461347 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
NCL-207ENST00000461347 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
NCL-207ENST00000461347 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
NCL-207ENST00000461347 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
NCL-207ENST00000461347 KMT2AQ03164 3969 aa7.76□□□□□ -1.17
NCL-207ENST00000461347 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
NCL-207ENST00000461347 Q5VSD8 79 aa7.71□□□□□ -1.17
NCL-207ENST00000461347 PKD1P98161 4303 aa7.7□□□□□ -1.18
NCL-207ENST00000461347 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
NCL-207ENST00000461347 DNAH11Q96DT5 4516 aa7.68□□□□□ -1.18
NCL-207ENST00000461347 DNAH8Q96JB1 4490 aa7.65□□□□□ -1.18
NCL-207ENST00000461347 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
NCL-207ENST00000461347 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
NCL-207ENST00000461347 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
NCL-207ENST00000461347 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
NCL-207ENST00000461347 R4GN34 69 aa7.58□□□□□ -1.2
NCL-207ENST00000461347 SACSQ9NZJ4 4579 aa7.56□□□□□ -1.2
NCL-207ENST00000461347 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms