RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 CD164Q04900 197 aa8.43□□□□□ -1.06
SCFD1-203ENST00000458591 IGLV5-52A0A0A0MRZ9 124 aa8.43□□□□□ -1.06
SCFD1-203ENST00000458591 Q75L30 129 aa8.43□□□□□ -1.06
SCFD1-203ENST00000458591 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
SCFD1-203ENST00000458591 Q6ZR54 194 aa8.42□□□□□ -1.06
SCFD1-203ENST00000458591 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-203ENST00000458591 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
SCFD1-203ENST00000458591 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
SCFD1-203ENST00000458591 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
SCFD1-203ENST00000458591 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.06
SCFD1-203ENST00000458591 MEGF8Q7Z7M0 2845 aa8.4□□□□□ -1.06
SCFD1-203ENST00000458591 A6NED7 52 aa8.39□□□□□ -1.07
SCFD1-203ENST00000458591 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
SCFD1-203ENST00000458591 ZNF861PO60384 105 aa8.38□□□□□ -1.07
SCFD1-203ENST00000458591 MRPL34Q9BQ48 92 aaKnown RBP8.36□□□□□ -1.07
SCFD1-203ENST00000458591 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
SCFD1-203ENST00000458591 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
SCFD1-203ENST00000458591 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
SCFD1-203ENST00000458591 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
SCFD1-203ENST00000458591 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
SCFD1-203ENST00000458591 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
SCFD1-203ENST00000458591 Q5W150 140 aa8.33□□□□□ -1.08
SCFD1-203ENST00000458591 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
SCFD1-203ENST00000458591 LCA10Q71F78 164 aa8.32□□□□□ -1.08
SCFD1-203ENST00000458591 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
SCFD1-203ENST00000458591 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
SCFD1-203ENST00000458591 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
SCFD1-203ENST00000458591 HRES1P13985 223 aa8.29□□□□□ -1.08
SCFD1-203ENST00000458591 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
SCFD1-203ENST00000458591 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
SCFD1-203ENST00000458591 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
SCFD1-203ENST00000458591 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
SCFD1-203ENST00000458591 LY6G6CO95867 125 aa8.25□□□□□ -1.09
SCFD1-203ENST00000458591 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
SCFD1-203ENST00000458591 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
SCFD1-203ENST00000458591 A6NN06 94 aa8.21□□□□□ -1.09
SCFD1-203ENST00000458591 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.09
SCFD1-203ENST00000458591 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
SCFD1-203ENST00000458591 HYDINQ4G0P3 5121 aa8.19□□□□□ -1.1
SCFD1-203ENST00000458591 SPINK7P58062 85 aa8.18□□□□□ -1.1
SCFD1-203ENST00000458591 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
SCFD1-203ENST00000458591 ACYP2P14621 99 aa8.17□□□□□ -1.1
SCFD1-203ENST00000458591 KRTAP13-2Q52LG2 175 aa8.17□□□□□ -1.1
SCFD1-203ENST00000458591 PKD1P98161 4303 aa8.15□□□□□ -1.1
SCFD1-203ENST00000458591 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
SCFD1-203ENST00000458591 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
SCFD1-203ENST00000458591 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
SCFD1-203ENST00000458591 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
SCFD1-203ENST00000458591 LINC00313P59037 77 aa8.11□□□□□ -1.11
SCFD1-203ENST00000458591 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
SCFD1-203ENST00000458591 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
SCFD1-203ENST00000458591 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
SCFD1-203ENST00000458591 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
SCFD1-203ENST00000458591 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
SCFD1-203ENST00000458591 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
SCFD1-203ENST00000458591 A0A1B0GU69 56 aa8.02□□□□□ -1.13
SCFD1-203ENST00000458591 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
SCFD1-203ENST00000458591 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
SCFD1-203ENST00000458591 Q6ZSA8 131 aa7.99□□□□□ -1.13
SCFD1-203ENST00000458591 PKHD1P08F94 4074 aa7.96□□□□□ -1.14
SCFD1-203ENST00000458591 PLA2G1BP04054 148 aaKnown RBP7.95□□□□□ -1.14
SCFD1-203ENST00000458591 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
SCFD1-203ENST00000458591 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
SCFD1-203ENST00000458591 UQCR11O14957 56 aa7.9□□□□□ -1.14
SCFD1-203ENST00000458591 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
SCFD1-203ENST00000458591 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
SCFD1-203ENST00000458591 Q8N1X5 172 aa7.85□□□□□ -1.15
SCFD1-203ENST00000458591 FAT1Q14517 4588 aa7.85□□□□□ -1.15
SCFD1-203ENST00000458591 SPINK1P00995 79 aa7.84□□□□□ -1.15
SCFD1-203ENST00000458591 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-203ENST00000458591 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
SCFD1-203ENST00000458591 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
SCFD1-203ENST00000458591 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
SCFD1-203ENST00000458591 ADM2Q7Z4H4 148 aa7.8□□□□□ -1.16
SCFD1-203ENST00000458591 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
SCFD1-203ENST00000458591 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
SCFD1-203ENST00000458591 APOBP04114 4563 aaKnown RBP7.7□□□□□ -1.18
SCFD1-203ENST00000458591 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
SCFD1-203ENST00000458591 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
SCFD1-203ENST00000458591 RPS29P62273 56 aaKnown RBP7.66□□□□□ -1.18
SCFD1-203ENST00000458591 KRTAP3-1Q9BYR8 98 aa7.65□□□□□ -1.18
SCFD1-203ENST00000458591 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-203ENST00000458591 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
SCFD1-203ENST00000458591 A8MUU9 505 aa7.59□□□□□ -1.19
SCFD1-203ENST00000458591 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
SCFD1-203ENST00000458591 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
SCFD1-203ENST00000458591 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
SCFD1-203ENST00000458591 H0YAA0 97 aa7.54□□□□□ -1.2
SCFD1-203ENST00000458591 A0A1B0GU33 70 aa7.52□□□□□ -1.21
SCFD1-203ENST00000458591 RYR2Q92736 4967 aa7.52□□□□□ -1.21
SCFD1-203ENST00000458591 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
SCFD1-203ENST00000458591 FAT3Q8TDW7 4589 aa7.5□□□□□ -1.21
SCFD1-203ENST00000458591 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
SCFD1-203ENST00000458591 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-203ENST00000458591 HSPG2P98160 4391 aa7.46□□□□□ -1.21
SCFD1-203ENST00000458591 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
SCFD1-203ENST00000458591 TNXBP22105 4242 aa7.44□□□□□ -1.22
SCFD1-203ENST00000458591 K7ERS5 55 aa7.4□□□□□ -1.22
SCFD1-203ENST00000458591 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.23
SCFD1-203ENST00000458591 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 2064.8 ms