RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
RAPGEF3-205ENST00000449771 ITPR1Q14643 2758 aa7.29□□□□□ -1.24
RAPGEF3-205ENST00000449771 DNAH14Q0VDD8 3507 aa7.28□□□□□ -1.24
RAPGEF3-205ENST00000449771 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
RAPGEF3-205ENST00000449771 COL6A3P12111 3177 aa7.26□□□□□ -1.25
RAPGEF3-205ENST00000449771 KRTAP13-3Q3SY46 172 aa7.24□□□□□ -1.25
RAPGEF3-205ENST00000449771 VCANP13611 3396 aa7.23□□□□□ -1.25
RAPGEF3-205ENST00000449771 EYSQ5T1H1 3165 aa7.22□□□□□ -1.25
RAPGEF3-205ENST00000449771 CELSR3Q9NYQ7 3312 aa7.22□□□□□ -1.25
RAPGEF3-205ENST00000449771 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.25
RAPGEF3-205ENST00000449771 SPTBN5Q9NRC6 3674 aaKnown RBP7.21□□□□□ -1.25
RAPGEF3-205ENST00000449771 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
RAPGEF3-205ENST00000449771 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
RAPGEF3-205ENST00000449771 HIVEP1P15822 2718 aa7.18□□□□□ -1.26
RAPGEF3-205ENST00000449771 APCP25054 2843 aa7.18□□□□□ -1.26
RAPGEF3-205ENST00000449771 KALRNO60229 2985 aa7.16□□□□□ -1.26
RAPGEF3-205ENST00000449771 TACC2O95359 2948 aa7.15□□□□□ -1.26
RAPGEF3-205ENST00000449771 ATMQ13315 3056 aa7.13□□□□□ -1.27
RAPGEF3-205ENST00000449771 FREM2Q5SZK8 3169 aa7.12□□□□□ -1.27
RAPGEF3-205ENST00000449771 TNRC18O15417 2968 aaPredicted RBP7.11□□□□□ -1.27
RAPGEF3-205ENST00000449771 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
RAPGEF3-205ENST00000449771 LAMA1P25391 3075 aa7.1□□□□□ -1.27
RAPGEF3-205ENST00000449771 REV3LO60673 3130 aa7.1□□□□□ -1.27
RAPGEF3-205ENST00000449771 LRBAP50851 2863 aa7.1□□□□□ -1.27
RAPGEF3-205ENST00000449771 COL12A1Q99715 3063 aa7.09□□□□□ -1.27
RAPGEF3-205ENST00000449771 DMXL2Q8TDJ6 3036 aa7.04□□□□□ -1.28
RAPGEF3-205ENST00000449771 FLNCQ14315 2725 aa7.03□□□□□ -1.28
RAPGEF3-205ENST00000449771 SPEGQ15772 3267 aa7□□□□□ -1.29
RAPGEF3-205ENST00000449771 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
RAPGEF3-205ENST00000449771 FRYLO94915 3013 aa6.98□□□□□ -1.29
RAPGEF3-205ENST00000449771 ASH1LQ9NR48 2969 aaKnown RBP6.98□□□□□ -1.29
RAPGEF3-205ENST00000449771 BOD1L1Q8NFC6 3051 aa6.94□□□□□ -1.3
RAPGEF3-205ENST00000449771 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
RAPGEF3-205ENST00000449771 ADGRG4Q8IZF6 3080 aa6.94□□□□□ -1.3
RAPGEF3-205ENST00000449771 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
RAPGEF3-205ENST00000449771 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.3
RAPGEF3-205ENST00000449771 CELSR2Q9HCU4 2923 aa6.87□□□□□ -1.31
RAPGEF3-205ENST00000449771 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
RAPGEF3-205ENST00000449771 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
RAPGEF3-205ENST00000449771 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
RAPGEF3-205ENST00000449771 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
RAPGEF3-205ENST00000449771 NBEAQ8NFP9 2946 aa6.82□□□□□ -1.32
RAPGEF3-205ENST00000449771 DMXL1Q9Y485 3027 aa6.78□□□□□ -1.32
RAPGEF3-205ENST00000449771 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
RAPGEF3-205ENST00000449771 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
RAPGEF3-205ENST00000449771 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
RAPGEF3-205ENST00000449771 HRNRQ86YZ3 2850 aaPredicted RBP6.69□□□□□ -1.34
RAPGEF3-205ENST00000449771 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
RAPGEF3-205ENST00000449771 NF1P21359 2839 aa6.66□□□□□ -1.34
RAPGEF3-205ENST00000449771 ZANQ9Y493 2812 aa6.65□□□□□ -1.34
RAPGEF3-205ENST00000449771 LOC400499M0QZD8 3231 aa6.63□□□□□ -1.35
RAPGEF3-205ENST00000449771 TENM3Q9P273 2699 aa6.62□□□□□ -1.35
RAPGEF3-205ENST00000449771 DMDP11532 3685 aa6.61□□□□□ -1.35
RAPGEF3-205ENST00000449771 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
RAPGEF3-205ENST00000449771 TGP01266 2768 aa6.6□□□□□ -1.35
RAPGEF3-205ENST00000449771 WDFY3Q8IZQ1 3526 aa6.6□□□□□ -1.35
RAPGEF3-205ENST00000449771 CELSR1Q9NYQ6 3014 aa6.59□□□□□ -1.35
RAPGEF3-205ENST00000449771 INE1O15225 51 aa6.59□□□□□ -1.36
RAPGEF3-205ENST00000449771 ASPMQ8IZT6 3477 aa6.57□□□□□ -1.36
RAPGEF3-205ENST00000449771 FBN2P35556 2912 aa6.54□□□□□ -1.36
RAPGEF3-205ENST00000449771 MUC3AQ02505 3323 aa6.54□□□□□ -1.36
RAPGEF3-205ENST00000449771 LAMA5O15230 3695 aa6.52□□□□□ -1.37
RAPGEF3-205ENST00000449771 RELNP78509 3460 aa6.48□□□□□ -1.37
RAPGEF3-205ENST00000449771 NBPF19A0A087WUL8 3843 aa6.44□□□□□ -1.38
RAPGEF3-205ENST00000449771 MXRA5Q9NR99 2828 aa6.41□□□□□ -1.38
RAPGEF3-205ENST00000449771 DCHS1Q96JQ0 3298 aa6.41□□□□□ -1.38
RAPGEF3-205ENST00000449771 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
RAPGEF3-205ENST00000449771 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
RAPGEF3-205ENST00000449771 ZFHX4Q86UP3 3567 aa6.39□□□□□ -1.39
RAPGEF3-205ENST00000449771 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
RAPGEF3-205ENST00000449771 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
RAPGEF3-205ENST00000449771 ANK3Q12955 4377 aaKnown RBP6.34□□□□□ -1.39
RAPGEF3-205ENST00000449771 VWFP04275 2813 aa6.33□□□□□ -1.4
RAPGEF3-205ENST00000449771 PDZD2O15018 2839 aa6.32□□□□□ -1.4
RAPGEF3-205ENST00000449771 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
RAPGEF3-205ENST00000449771 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
RAPGEF3-205ENST00000449771 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
RAPGEF3-205ENST00000449771 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
RAPGEF3-205ENST00000449771 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.43
RAPGEF3-205ENST00000449771 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
RAPGEF3-205ENST00000449771 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
RAPGEF3-205ENST00000449771 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
RAPGEF3-205ENST00000449771 OTOGQ6ZRI0 2925 aa6.09□□□□□ -1.43
RAPGEF3-205ENST00000449771 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
RAPGEF3-205ENST00000449771 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
RAPGEF3-205ENST00000449771 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
RAPGEF3-205ENST00000449771 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
RAPGEF3-205ENST00000449771 SPENQ96T58 3664 aaKnown RBP6.05□□□□□ -1.44
RAPGEF3-205ENST00000449771 SVEP1Q4LDE5 3571 aa6.02□□□□□ -1.45
RAPGEF3-205ENST00000449771 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
RAPGEF3-205ENST00000449771 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
RAPGEF3-205ENST00000449771 BSNQ9UPA5 3926 aa5.99□□□□□ -1.45
RAPGEF3-205ENST00000449771 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
RAPGEF3-205ENST00000449771 MEGF8Q7Z7M0 2845 aa5.95□□□□□ -1.46
RAPGEF3-205ENST00000449771 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
RAPGEF3-205ENST00000449771 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
RAPGEF3-205ENST00000449771 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
RAPGEF3-205ENST00000449771 TRRAPQ9Y4A5 3859 aa5.88□□□□□ -1.47
RAPGEF3-205ENST00000449771 SRRM2Q9UQ35 2752 aaKnown RBP5.88□□□□□ -1.47
RAPGEF3-205ENST00000449771 CUBNO60494 3623 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms