RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
RFC4-210ENST00000449502 SMIM20Q8N5G0 67 aa5.52□□□□□ -1.53
RFC4-210ENST00000449502 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
RFC4-210ENST00000449502 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
RFC4-210ENST00000449502 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
RFC4-210ENST00000449502 LINC00313P59037 77 aa5.49□□□□□ -1.53
RFC4-210ENST00000449502 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
RFC4-210ENST00000449502 MMP24-AS1A0A0U1RRL7 71 aa5.48□□□□□ -1.53
RFC4-210ENST00000449502 J3QL48 77 aa5.48□□□□□ -1.53
RFC4-210ENST00000449502 PCP4P48539 62 aa5.48□□□□□ -1.53
RFC4-210ENST00000449502 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
RFC4-210ENST00000449502 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
RFC4-210ENST00000449502 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
RFC4-210ENST00000449502 NDUFS5O43920 106 aa5.46□□□□□ -1.54
RFC4-210ENST00000449502 TMEM254Q8TBM7 123 aa5.46□□□□□ -1.54
RFC4-210ENST00000449502 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
RFC4-210ENST00000449502 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
RFC4-210ENST00000449502 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
RFC4-210ENST00000449502 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
RFC4-210ENST00000449502 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
RFC4-210ENST00000449502 NOTCH2NLQ7Z3S9 236 aa5.43□□□□□ -1.54
RFC4-210ENST00000449502 UQCRQO14949 82 aa5.42□□□□□ -1.54
RFC4-210ENST00000449502 COX7CP15954 63 aa5.42□□□□□ -1.54
RFC4-210ENST00000449502 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
RFC4-210ENST00000449502 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.54
RFC4-210ENST00000449502 MP68P56378 58 aa5.4□□□□□ -1.54
RFC4-210ENST00000449502 PRR4Q16378 134 aa5.4□□□□□ -1.54
RFC4-210ENST00000449502 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
RFC4-210ENST00000449502 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
RFC4-210ENST00000449502 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
RFC4-210ENST00000449502 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
RFC4-210ENST00000449502 HERC2O95714 4834 aa5.39□□□□□ -1.55
RFC4-210ENST00000449502 H0Y9P7 68 aa5.36□□□□□ -1.55
RFC4-210ENST00000449502 CCDC179H3BU77 68 aa5.36□□□□□ -1.55
RFC4-210ENST00000449502 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
RFC4-210ENST00000449502 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
RFC4-210ENST00000449502 TNXBP22105 4242 aa5.35□□□□□ -1.55
RFC4-210ENST00000449502 Q8N9P0 234 aaPredicted RBP5.35□□□□□ -1.55
RFC4-210ENST00000449502 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.55
RFC4-210ENST00000449502 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
RFC4-210ENST00000449502 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.56
RFC4-210ENST00000449502 H3BPC8 53 aa5.33□□□□□ -1.56
RFC4-210ENST00000449502 LINC00208Q96KT6 92 aa5.31□□□□□ -1.56
RFC4-210ENST00000449502 SNURFQ9Y675 71 aa5.31□□□□□ -1.56
RFC4-210ENST00000449502 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
RFC4-210ENST00000449502 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
RFC4-210ENST00000449502 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 A8MUU9 505 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 NDUFC1O43677 76 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 Q75L30 129 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
RFC4-210ENST00000449502 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
RFC4-210ENST00000449502 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
RFC4-210ENST00000449502 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
RFC4-210ENST00000449502 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
RFC4-210ENST00000449502 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
RFC4-210ENST00000449502 Q5W150 140 aa5.27□□□□□ -1.57
RFC4-210ENST00000449502 ATP11AUNQ6ZP68 121 aa5.27□□□□□ -1.57
RFC4-210ENST00000449502 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
RFC4-210ENST00000449502 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
RFC4-210ENST00000449502 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
RFC4-210ENST00000449502 XP32Q5T750 250 aa5.24□□□□□ -1.57
RFC4-210ENST00000449502 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
RFC4-210ENST00000449502 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
RFC4-210ENST00000449502 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
RFC4-210ENST00000449502 C7orf65Q6ZTY9 151 aa5.21□□□□□ -1.58
RFC4-210ENST00000449502 H7BZZ5 65 aa5.2□□□□□ -1.58
RFC4-210ENST00000449502 TMEM258P61165 79 aa5.2□□□□□ -1.58
RFC4-210ENST00000449502 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
RFC4-210ENST00000449502 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
RFC4-210ENST00000449502 FAM236DA0A1B0GTK5 79 aa5.18□□□□□ -1.58
RFC4-210ENST00000449502 FAM236CP0DP71 79 aa5.18□□□□□ -1.58
RFC4-210ENST00000449502 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
RFC4-210ENST00000449502 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
RFC4-210ENST00000449502 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
RFC4-210ENST00000449502 SPINK7P58062 85 aa5.15□□□□□ -1.59
RFC4-210ENST00000449502 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
RFC4-210ENST00000449502 HRES1P13985 223 aa5.12□□□□□ -1.59
RFC4-210ENST00000449502 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
RFC4-210ENST00000449502 ACYP2P14621 99 aa5.05□□□□□ -1.6
RFC4-210ENST00000449502 SERP1Q9Y6X1 66 aa5.05□□□□□ -1.6
RFC4-210ENST00000449502 A8MUN3 132 aa5.04□□□□□ -1.6
RFC4-210ENST00000449502 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
RFC4-210ENST00000449502 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
RFC4-210ENST00000449502 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
RFC4-210ENST00000449502 COX6B2Q6YFQ2 88 aa5.01□□□□□ -1.61
RFC4-210ENST00000449502 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
RFC4-210ENST00000449502 COA5Q86WW8 74 aa5□□□□□ -1.61
RFC4-210ENST00000449502 LPAP08519 4548 aa5□□□□□ -1.61
RFC4-210ENST00000449502 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
RFC4-210ENST00000449502 HERC1Q15751 4861 aa4.96□□□□□ -1.62
RFC4-210ENST00000449502 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
RFC4-210ENST00000449502 LRP2P98164 4655 aa4.94□□□□□ -1.62
RFC4-210ENST00000449502 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
RFC4-210ENST00000449502 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
RFC4-210ENST00000449502 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
RFC4-210ENST00000449502 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
RFC4-210ENST00000449502 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
RFC4-210ENST00000449502 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms