RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 BSNQ9UPA5 3926 aa0.95□□□□□ -2.26
LINC00440-201ENST00000446579 MRPL34Q9BQ48 92 aaKnown RBP0.95□□□□□ -2.26
LINC00440-201ENST00000446579 APLNQ9ULZ1 77 aa0.95□□□□□ -2.26
LINC00440-201ENST00000446579 PRRC2CQ9Y520 2896 aaKnown RBP0.95□□□□□ -2.26
LINC00440-201ENST00000446579 NBPF19A0A087WUL8 3843 aa0.95□□□□□ -2.26
LINC00440-201ENST00000446579 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
LINC00440-201ENST00000446579 ANKHD1Q8IWZ3 2542 aaKnown RBP0.94□□□□□ -2.26
LINC00440-201ENST00000446579 DCHS1Q96JQ0 3298 aa0.94□□□□□ -2.26
LINC00440-201ENST00000446579 BOD1L1Q8NFC6 3051 aa0.94□□□□□ -2.26
LINC00440-201ENST00000446579 DSPP15924 2871 aaKnown RBP0.94□□□□□ -2.26
LINC00440-201ENST00000446579 MMP24-AS1A0A0U1RRL7 71 aa0.94□□□□□ -2.26
LINC00440-201ENST00000446579 PRLHP81277 87 aa0.94□□□□□ -2.26
LINC00440-201ENST00000446579 DMXL2Q8TDJ6 3036 aa0.94□□□□□ -2.26
LINC00440-201ENST00000446579 ZFHX3Q15911 3703 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 LOC400499M0QZD8 3231 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 MAP1BP46821 2468 aaKnown RBP0.93□□□□□ -2.26
LINC00440-201ENST00000446579 A0A096LNI7 61 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 FAM186AA6NE01 2351 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 TACC2O95359 2948 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 CSMD1Q96PZ7 3565 aa0.93□□□□□ -2.26
LINC00440-201ENST00000446579 MUC3AQ02505 3323 aa0.92□□□□□ -2.26
LINC00440-201ENST00000446579 MGAQ8IWI9 3026 aa0.92□□□□□ -2.26
LINC00440-201ENST00000446579 RELNP78509 3460 aa0.92□□□□□ -2.26
LINC00440-201ENST00000446579 VPS13CQ709C8 3753 aa0.92□□□□□ -2.26
LINC00440-201ENST00000446579 LRBAP50851 2863 aa0.92□□□□□ -2.26
LINC00440-201ENST00000446579 CELSR1Q9NYQ6 3014 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 ATMQ13315 3056 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 FBN2P35556 2912 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 PLCE1Q9P212 2302 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 BDP1A6H8Y1 2624 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 AKAP9Q99996 3911 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 DMXL1Q9Y485 3027 aa0.91□□□□□ -2.26
LINC00440-201ENST00000446579 ANKRD11Q6UB99 2663 aaPredicted RBP0.91□□□□□ -2.26
LINC00440-201ENST00000446579 AKAP13Q12802 2813 aa0.9□□□□□ -2.26
LINC00440-201ENST00000446579 PKDREJQ9NTG1 2253 aa0.9□□□□□ -2.27
LINC00440-201ENST00000446579 WNK2Q9Y3S1 2297 aa0.9□□□□□ -2.27
LINC00440-201ENST00000446579 CEP290O15078 2479 aa0.9□□□□□ -2.27
LINC00440-201ENST00000446579 NCOR1O75376 2440 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 ZNF292O60281 2723 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 DNAH1Q9P2D7 4330 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 CNOT1A5YKK6 2376 aaKnown RBP0.89□□□□□ -2.27
LINC00440-201ENST00000446579 SMR3AQ99954 134 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 HRNRQ86YZ3 2850 aaPredicted RBP0.89□□□□□ -2.27
LINC00440-201ENST00000446579 URB1O60287 2271 aaKnown RBP0.89□□□□□ -2.27
LINC00440-201ENST00000446579 DOPEY2Q9Y3R5 2298 aa0.89□□□□□ -2.27
LINC00440-201ENST00000446579 DCHS2Q6V1P9 2916 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 MAP1AP78559 2803 aaPredicted RBP0.88□□□□□ -2.27
LINC00440-201ENST00000446579 CREBBPQ92793 2442 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 COL12A1Q99715 3063 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 ANK3Q12955 4377 aaKnown RBP0.88□□□□□ -2.27
LINC00440-201ENST00000446579 TTC28Q96AY4 2481 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 CACNA1HO95180 2353 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 TPRP12270 2363 aaKnown RBP0.88□□□□□ -2.27
LINC00440-201ENST00000446579 CEP295Q9C0D2 2601 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 SPTA1P02549 2419 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 APC2O95996 2303 aa0.88□□□□□ -2.27
LINC00440-201ENST00000446579 TLN1Q9Y490 2541 aaKnown RBP0.87□□□□□ -2.27
LINC00440-201ENST00000446579 ITPR1Q14643 2758 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 EP300Q09472 2414 aaPredicted RBP0.87□□□□□ -2.27
LINC00440-201ENST00000446579 CEP250Q9BV73 2442 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 PTPRZ1P23471 2315 aaPredicted RBP0.87□□□□□ -2.27
LINC00440-201ENST00000446579 NAV2Q8IVL1 2488 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 H1FX-AS1Q4G0G2 97 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 COX6B2Q6YFQ2 88 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
LINC00440-201ENST00000446579 DOPEY1Q5JWR5 2465 aa0.87□□□□□ -2.27
LINC00440-201ENST00000446579 WNK1Q9H4A3 2382 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 RPS29P62273 56 aaKnown RBP0.86□□□□□ -2.27
LINC00440-201ENST00000446579 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 SPTBN2O15020 2390 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 CRYBG3Q68DQ2 2970 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 GVINP1Q7Z2Y8 2422 aa0.86□□□□□ -2.27
LINC00440-201ENST00000446579 SPTAN1Q13813 2472 aaKnown RBP0.86□□□□□ -2.27
LINC00440-201ENST00000446579 CSMD2Q7Z408 3487 aa0.85□□□□□ -2.27
LINC00440-201ENST00000446579 UBR5O95071 2799 aaPredicted RBP0.85□□□□□ -2.27
LINC00440-201ENST00000446579 SPTBN1Q01082 2364 aaKnown RBP0.85□□□□□ -2.27
LINC00440-201ENST00000446579 ANKRD17O75179 2603 aaKnown RBP0.85□□□□□ -2.27
LINC00440-201ENST00000446579 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
LINC00440-201ENST00000446579 APCP25054 2843 aa0.85□□□□□ -2.27
LINC00440-201ENST00000446579 MXRA5Q9NR99 2828 aa0.85□□□□□ -2.27
LINC00440-201ENST00000446579 CHD6Q8TD26 2715 aa0.85□□□□□ -2.27
LINC00440-201ENST00000446579 ACACAQ13085 2346 aa0.84□□□□□ -2.27
LINC00440-201ENST00000446579 NIPBLQ6KC79 2804 aaeCLIP0.84□□□□□ -2.27
LINC00440-201ENST00000446579 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.84□□□□□ -2.28
LINC00440-201ENST00000446579 SETXQ7Z333 2677 aaKnown RBP0.84□□□□□ -2.28
LINC00440-201ENST00000446579 NBEAL2Q6ZNJ1 2754 aa0.84□□□□□ -2.28
LINC00440-201ENST00000446579 SPG11Q96JI7 2443 aa0.84□□□□□ -2.28
LINC00440-201ENST00000446579 IGF2RP11717 2491 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 DYNC2H1Q8NCM8 4307 aaKnown RBP0.83□□□□□ -2.28
LINC00440-201ENST00000446579 CUBNO60494 3623 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 ABCA2Q9BZC7 2435 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 H0YAA0 97 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 CFAP46Q8IYW2 2715 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 C2CD3Q4AC94 2353 aa0.83□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH10Q8IVF4 4471 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms