RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 BOD1L1Q8NFC6 3051 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 INE1O15225 51 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 KRTAP12-2P59991 146 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 BSNQ9UPA5 3926 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 CSPG4Q6UVK1 2322 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 CHD6Q8TD26 2715 aa1.44□□□□□ -2.18
RPL39P40-201ENST00000445481 TACC2O95359 2948 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 ITPR1Q14643 2758 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 COL12A1Q99715 3063 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 GVINP1Q7Z2Y8 2422 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 SPG11Q96JI7 2443 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 M0QZ58 72 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 DNAH1Q9P2D7 4330 aa1.43□□□□□ -2.18
RPL39P40-201ENST00000445481 ASPMQ8IZT6 3477 aa1.42□□□□□ -2.18
RPL39P40-201ENST00000445481 SVEP1Q4LDE5 3571 aa1.42□□□□□ -2.18
RPL39P40-201ENST00000445481 CELSR1Q9NYQ6 3014 aa1.42□□□□□ -2.18
RPL39P40-201ENST00000445481 IGF2RP11717 2491 aa1.42□□□□□ -2.18
RPL39P40-201ENST00000445481 LOC400499M0QZD8 3231 aa1.42□□□□□ -2.18
RPL39P40-201ENST00000445481 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 RIF1Q5UIP0 2472 aaKnown RBP1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 HRNRQ86YZ3 2850 aaPredicted RBP1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 PRRC2CQ9Y520 2896 aaKnown RBP1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 KRTAP13-2Q52LG2 175 aa1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 DMXL1Q9Y485 3027 aa1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 ATRXP46100 2492 aa1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 SPTBN4Q9H254 2564 aa1.41□□□□□ -2.18
RPL39P40-201ENST00000445481 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.18
RPL39P40-201ENST00000445481 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
RPL39P40-201ENST00000445481 TLN1Q9Y490 2541 aaKnown RBP1.4□□□□□ -2.19
RPL39P40-201ENST00000445481 TLN2Q9Y4G6 2542 aa1.4□□□□□ -2.19
RPL39P40-201ENST00000445481 TENM2Q9NT68 2774 aa1.4□□□□□ -2.19
RPL39P40-201ENST00000445481 DCHS2Q6V1P9 2916 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 HIVEP2P31629 2446 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 LAMA5O15230 3695 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 R4GN34 69 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 NCOR2Q9Y618 2525 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 RELNP78509 3460 aa1.39□□□□□ -2.19
RPL39P40-201ENST00000445481 ATMQ13315 3056 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 ASH1LQ9NR48 2969 aaKnown RBP1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 HIVEP3Q5T1R4 2406 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 SPRR5A0A1B0GTR4 108 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 KRTAP10-1P60331 282 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 JMJD1CQ15652 2540 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 CELSR2Q9HCU4 2923 aa1.38□□□□□ -2.19
RPL39P40-201ENST00000445481 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 ANKRD11Q6UB99 2663 aaPredicted RBP1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 LRBAP50851 2863 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 KRTAP1-4P0C5Y4 121 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 LCE1BQ5T7P3 118 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 F8P00451 2351 aa1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 SETXQ7Z333 2677 aaKnown RBP1.37□□□□□ -2.19
RPL39P40-201ENST00000445481 ANK3Q12955 4377 aaKnown RBP1.36□□□□□ -2.19
RPL39P40-201ENST00000445481 ZFYVE26Q68DK2 2539 aa1.36□□□□□ -2.19
RPL39P40-201ENST00000445481 NF1P21359 2839 aa1.36□□□□□ -2.19
RPL39P40-201ENST00000445481 NAV2Q8IVL1 2488 aa1.36□□□□□ -2.19
RPL39P40-201ENST00000445481 VPS13CQ709C8 3753 aa1.36□□□□□ -2.19
RPL39P40-201ENST00000445481 EYSQ5T1H1 3165 aa1.35□□□□□ -2.19
RPL39P40-201ENST00000445481 MYO9AB2RTY4 2548 aa1.35□□□□□ -2.19
RPL39P40-201ENST00000445481 UTP20O75691 2785 aaKnown RBP1.35□□□□□ -2.19
RPL39P40-201ENST00000445481 SONP18583 2426 aaKnown RBP1.35□□□□□ -2.19
RPL39P40-201ENST00000445481 ZNF462Q96JM2 2506 aa1.34□□□□□ -2.19
RPL39P40-201ENST00000445481 DOPEY1Q5JWR5 2465 aa1.34□□□□□ -2.2
RPL39P40-201ENST00000445481 NBEAL2Q6ZNJ1 2754 aa1.33□□□□□ -2.2
RPL39P40-201ENST00000445481 C9orf92A6NGG3 77 aa1.33□□□□□ -2.2
RPL39P40-201ENST00000445481 Q5VSD8 79 aa1.33□□□□□ -2.2
RPL39P40-201ENST00000445481 APCP25054 2843 aa1.33□□□□□ -2.2
RPL39P40-201ENST00000445481 MTORP42345 2549 aa1.32□□□□□ -2.2
RPL39P40-201ENST00000445481 FRAS1Q86XX4 4008 aa1.32□□□□□ -2.2
RPL39P40-201ENST00000445481 SMR3AQ99954 134 aa1.32□□□□□ -2.2
RPL39P40-201ENST00000445481 USP9XQ93008 2570 aaPredicted RBP1.32□□□□□ -2.2
RPL39P40-201ENST00000445481 TRRAPQ9Y4A5 3859 aa1.32□□□□□ -2.2
RPL39P40-201ENST00000445481 USP9YO00507 2555 aaPredicted RBP1.31□□□□□ -2.2
RPL39P40-201ENST00000445481 CEP295Q9C0D2 2601 aa1.31□□□□□ -2.2
RPL39P40-201ENST00000445481 UNC79Q9P2D8 2635 aa1.31□□□□□ -2.2
RPL39P40-201ENST00000445481 GCN1Q92616 2671 aaKnown RBP1.31□□□□□ -2.2
RPL39P40-201ENST00000445481 PTPN13Q12923 2485 aa1.31□□□□□ -2.2
RPL39P40-201ENST00000445481 DNAH8Q96JB1 4490 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 TEX15Q9BXT5 2789 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 CRYBG3Q68DQ2 2970 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 PIEZO1Q92508 2521 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 DNAH3Q8TD57 4116 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 ANK2Q01484 3957 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 ACANP16112 2415 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 EPG5Q9HCE0 2579 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 CSMD2Q7Z408 3487 aa1.3□□□□□ -2.2
RPL39P40-201ENST00000445481 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
RPL39P40-201ENST00000445481 MUC3AQ02505 3323 aa1.29□□□□□ -2.2
RPL39P40-201ENST00000445481 TTC28Q96AY4 2481 aa1.29□□□□□ -2.2
RPL39P40-201ENST00000445481 CUBNO60494 3623 aa1.29□□□□□ -2.2
RPL39P40-201ENST00000445481 MXRA5Q9NR99 2828 aa1.29□□□□□ -2.2
RPL39P40-201ENST00000445481 PKD1L2Q7Z442 2459 aa1.28□□□□□ -2.2
RPL39P40-201ENST00000445481 TENM4Q6N022 2769 aa1.28□□□□□ -2.2
RPL39P40-201ENST00000445481 SRRM2Q9UQ35 2752 aaKnown RBP1.28□□□□□ -2.2
RPL39P40-201ENST00000445481 NIPBLQ6KC79 2804 aaeCLIP1.28□□□□□ -2.2
RPL39P40-201ENST00000445481 DNAH17Q9UFH2 4485 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms