RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
SMARCA4-204ENST00000444061 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
SMARCA4-204ENST00000444061 PKD1L1Q8TDX9 2849 aa8.38□□□□□ -1.07
SMARCA4-204ENST00000444061 FBN1P35555 2871 aaKnown RBP8.38□□□□□ -1.07
SMARCA4-204ENST00000444061 Q8N1X5 172 aa8.37□□□□□ -1.07
SMARCA4-204ENST00000444061 A0A087X002 238 aa8.37□□□□□ -1.07
SMARCA4-204ENST00000444061 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
SMARCA4-204ENST00000444061 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
SMARCA4-204ENST00000444061 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
SMARCA4-204ENST00000444061 OXTP01178 125 aa8.34□□□□□ -1.07
SMARCA4-204ENST00000444061 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
SMARCA4-204ENST00000444061 VWFP04275 2813 aa8.33□□□□□ -1.08
SMARCA4-204ENST00000444061 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
SMARCA4-204ENST00000444061 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
SMARCA4-204ENST00000444061 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
SMARCA4-204ENST00000444061 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-204ENST00000444061 Q5VV11 94 aa8.26□□□□□ -1.09
SMARCA4-204ENST00000444061 TGP01266 2768 aa8.24□□□□□ -1.09
SMARCA4-204ENST00000444061 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
SMARCA4-204ENST00000444061 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
SMARCA4-204ENST00000444061 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
SMARCA4-204ENST00000444061 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
SMARCA4-204ENST00000444061 SPENQ96T58 3664 aaKnown RBP8.23□□□□□ -1.09
SMARCA4-204ENST00000444061 BSNQ9UPA5 3926 aa8.22□□□□□ -1.09
SMARCA4-204ENST00000444061 CSMD2Q7Z408 3487 aa8.22□□□□□ -1.09
SMARCA4-204ENST00000444061 LINC01554Q52M75 96 aa8.21□□□□□ -1.09
SMARCA4-204ENST00000444061 M0R2T5 61 aa8.19□□□□□ -1.1
SMARCA4-204ENST00000444061 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
SMARCA4-204ENST00000444061 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
SMARCA4-204ENST00000444061 HRES1P13985 223 aa8.12□□□□□ -1.11
SMARCA4-204ENST00000444061 SPINK7P58062 85 aa8.12□□□□□ -1.11
SMARCA4-204ENST00000444061 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
SMARCA4-204ENST00000444061 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
SMARCA4-204ENST00000444061 Q5W150 140 aa8.05□□□□□ -1.12
SMARCA4-204ENST00000444061 A0A1B0GU33 70 aa8.03□□□□□ -1.12
SMARCA4-204ENST00000444061 FBN3Q75N90 2809 aa8.03□□□□□ -1.12
SMARCA4-204ENST00000444061 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
SMARCA4-204ENST00000444061 H3BS24 57 aa8.01□□□□□ -1.13
SMARCA4-204ENST00000444061 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
SMARCA4-204ENST00000444061 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
SMARCA4-204ENST00000444061 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
SMARCA4-204ENST00000444061 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
SMARCA4-204ENST00000444061 TRRAPQ9Y4A5 3859 aa7.96□□□□□ -1.14
SMARCA4-204ENST00000444061 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
SMARCA4-204ENST00000444061 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
SMARCA4-204ENST00000444061 S4R3F8 94 aa7.92□□□□□ -1.14
SMARCA4-204ENST00000444061 A0A0D9SG42 100 aa7.89□□□□□ -1.15
SMARCA4-204ENST00000444061 A6NN06 94 aa7.87□□□□□ -1.15
SMARCA4-204ENST00000444061 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
SMARCA4-204ENST00000444061 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
SMARCA4-204ENST00000444061 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
SMARCA4-204ENST00000444061 ROMO1P60602 79 aa7.74□□□□□ -1.17
SMARCA4-204ENST00000444061 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
SMARCA4-204ENST00000444061 A8MUU9 505 aa7.72□□□□□ -1.17
SMARCA4-204ENST00000444061 TPRXLQ17RH7 258 aa7.71□□□□□ -1.17
SMARCA4-204ENST00000444061 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
SMARCA4-204ENST00000444061 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.18
SMARCA4-204ENST00000444061 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
SMARCA4-204ENST00000444061 XP32Q5T750 250 aa7.7□□□□□ -1.18
SMARCA4-204ENST00000444061 CUBNO60494 3623 aa7.69□□□□□ -1.18
SMARCA4-204ENST00000444061 R4GN34 69 aa7.68□□□□□ -1.18
SMARCA4-204ENST00000444061 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
SMARCA4-204ENST00000444061 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
SMARCA4-204ENST00000444061 ZNF469Q96JG9 3925 aaPredicted RBP7.66□□□□□ -1.18
SMARCA4-204ENST00000444061 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
SMARCA4-204ENST00000444061 A0A0A0MQY5 61 aa7.65□□□□□ -1.18
SMARCA4-204ENST00000444061 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
SMARCA4-204ENST00000444061 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
SMARCA4-204ENST00000444061 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
SMARCA4-204ENST00000444061 A8MU10 97 aa7.56□□□□□ -1.2
SMARCA4-204ENST00000444061 HUWE1Q7Z6Z7 4374 aaKnown RBP7.56□□□□□ -1.2
SMARCA4-204ENST00000444061 M0QZ58 72 aa7.54□□□□□ -1.2
SMARCA4-204ENST00000444061 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SMARCA4-204ENST00000444061 VPS13CQ709C8 3753 aa7.51□□□□□ -1.21
SMARCA4-204ENST00000444061 DNHD1Q96M86 4753 aa7.48□□□□□ -1.21
SMARCA4-204ENST00000444061 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
SMARCA4-204ENST00000444061 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
SMARCA4-204ENST00000444061 DNAH9Q9NYC9 4486 aa7.41□□□□□ -1.22
SMARCA4-204ENST00000444061 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
SMARCA4-204ENST00000444061 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
SMARCA4-204ENST00000444061 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
SMARCA4-204ENST00000444061 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
SMARCA4-204ENST00000444061 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
SMARCA4-204ENST00000444061 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
SMARCA4-204ENST00000444061 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
SMARCA4-204ENST00000444061 H0YAA0 97 aa7.09□□□□□ -1.28
SMARCA4-204ENST00000444061 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
SMARCA4-204ENST00000444061 ANK2Q01484 3957 aa7.05□□□□□ -1.28
SMARCA4-204ENST00000444061 PRKDCP78527 4128 aaKnown RBP7.04□□□□□ -1.28
SMARCA4-204ENST00000444061 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
SMARCA4-204ENST00000444061 PP632Q6XCG6 107 aa7□□□□□ -1.29
SMARCA4-204ENST00000444061 VPS13DQ5THJ4 4388 aa6.98□□□□□ -1.29
SMARCA4-204ENST00000444061 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
SMARCA4-204ENST00000444061 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
SMARCA4-204ENST00000444061 P0C880 135 aa6.92□□□□□ -1.3
SMARCA4-204ENST00000444061 TNP1P09430 55 aa6.89□□□□□ -1.31
SMARCA4-204ENST00000444061 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
SMARCA4-204ENST00000444061 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
SMARCA4-204ENST00000444061 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
SMARCA4-204ENST00000444061 CSMD3Q7Z407 3707 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms