RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NSD1Q96L73 2696 aaPredicted RBP1.64□□□□□ -2.15
TM9SF3-202ENST00000443638 EPPK1P58107 5090 aaKnown RBP1.64□□□□□ -2.15
TM9SF3-202ENST00000443638 MGAM2Q2M2H8 2515 aa1.64□□□□□ -2.15
TM9SF3-202ENST00000443638 AKAP6Q13023 2319 aa1.63□□□□□ -2.15
TM9SF3-202ENST00000443638 PRRC2CQ9Y520 2896 aaKnown RBP1.63□□□□□ -2.15
TM9SF3-202ENST00000443638 LINC00959A0A1B0GUT2 108 aa1.63□□□□□ -2.15
TM9SF3-202ENST00000443638 PRKDCP78527 4128 aaKnown RBP1.63□□□□□ -2.15
TM9SF3-202ENST00000443638 WNK1Q9H4A3 2382 aa1.62□□□□□ -2.15
TM9SF3-202ENST00000443638 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
TM9SF3-202ENST00000443638 ANK2Q01484 3957 aa1.62□□□□□ -2.15
TM9SF3-202ENST00000443638 VPS13CQ709C8 3753 aa1.61□□□□□ -2.15
TM9SF3-202ENST00000443638 SONP18583 2426 aaKnown RBP1.61□□□□□ -2.15
TM9SF3-202ENST00000443638 LCE6AA0A183 80 aa1.61□□□□□ -2.15
TM9SF3-202ENST00000443638 COX7BP24311 80 aa1.61□□□□□ -2.15
TM9SF3-202ENST00000443638 DEFB133Q30KQ1 61 aa1.61□□□□□ -2.15
TM9SF3-202ENST00000443638 SVEP1Q4LDE5 3571 aa1.6□□□□□ -2.15
TM9SF3-202ENST00000443638 RYR1P21817 5038 aa1.59□□□□□ -2.15
TM9SF3-202ENST00000443638 HYDINQ4G0P3 5121 aa1.59□□□□□ -2.15
TM9SF3-202ENST00000443638 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
TM9SF3-202ENST00000443638 ZANQ9Y493 2812 aa1.58□□□□□ -2.16
TM9SF3-202ENST00000443638 RPL38P63173 70 aaKnown RBP1.58□□□□□ -2.16
TM9SF3-202ENST00000443638 FAM103A1Q9BTL3 118 aaKnown RBP1.58□□□□□ -2.16
TM9SF3-202ENST00000443638 TRRAPQ9Y4A5 3859 aa1.58□□□□□ -2.16
TM9SF3-202ENST00000443638 TENM2Q9NT68 2774 aa1.57□□□□□ -2.16
TM9SF3-202ENST00000443638 TENM1Q9UKZ4 2725 aa1.57□□□□□ -2.16
TM9SF3-202ENST00000443638 USF3Q68DE3 2245 aa1.56□□□□□ -2.16
TM9SF3-202ENST00000443638 A0A0D9SG42 100 aa1.56□□□□□ -2.16
TM9SF3-202ENST00000443638 LINC01549A6NIU2 74 aa1.56□□□□□ -2.16
TM9SF3-202ENST00000443638 HERC2O95714 4834 aa1.56□□□□□ -2.16
TM9SF3-202ENST00000443638 VWFP04275 2813 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 A0A0D9SFI3 127 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 NDUFA4O00483 81 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 ENHOQ6UWT2 76 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 CMYA5Q8N3K9 4069 aa1.55□□□□□ -2.16
TM9SF3-202ENST00000443638 RYR2Q92736 4967 aa1.54□□□□□ -2.16
TM9SF3-202ENST00000443638 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
TM9SF3-202ENST00000443638 DYNC2H1Q8NCM8 4307 aaKnown RBP1.54□□□□□ -2.16
TM9SF3-202ENST00000443638 SPTY2D1-AS1A0A0U1RR47 76 aa1.54□□□□□ -2.16
TM9SF3-202ENST00000443638 TFF3Q07654 80 aa1.54□□□□□ -2.16
TM9SF3-202ENST00000443638 HRNRQ86YZ3 2850 aaPredicted RBP1.53□□□□□ -2.16
TM9SF3-202ENST00000443638 CPSF4LA6NMK7 179 aaKnown RBP1.53□□□□□ -2.16
TM9SF3-202ENST00000443638 UBL5Q9BZL1 73 aa1.53□□□□□ -2.16
TM9SF3-202ENST00000443638 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
TM9SF3-202ENST00000443638 TENM3Q9P273 2699 aa1.53□□□□□ -2.16
TM9SF3-202ENST00000443638 I3L2K1 104 aa1.52□□□□□ -2.17
TM9SF3-202ENST00000443638 PIGYQ3MUY2 71 aa1.52□□□□□ -2.17
TM9SF3-202ENST00000443638 CNFNQ9BYD5 112 aa1.52□□□□□ -2.17
TM9SF3-202ENST00000443638 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
TM9SF3-202ENST00000443638 DNAH1Q9P2D7 4330 aa1.51□□□□□ -2.17
TM9SF3-202ENST00000443638 CRIPTQ9P021 101 aa1.51□□□□□ -2.17
TM9SF3-202ENST00000443638 STATHP02808 62 aa1.5□□□□□ -2.17
TM9SF3-202ENST00000443638 USMG5Q96IX5 58 aa1.5□□□□□ -2.17
TM9SF3-202ENST00000443638 COL7A1Q02388 2944 aa1.5□□□□□ -2.17
TM9SF3-202ENST00000443638 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
TM9SF3-202ENST00000443638 I3L3M4 83 aa1.47□□□□□ -2.17
TM9SF3-202ENST00000443638 FXYD6Q9H0Q3 95 aa1.47□□□□□ -2.17
TM9SF3-202ENST00000443638 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.17
TM9SF3-202ENST00000443638 K7EQZ3 153 aa1.46□□□□□ -2.18
TM9SF3-202ENST00000443638 COX6A2Q02221 97 aa1.46□□□□□ -2.18
TM9SF3-202ENST00000443638 PRO0255Q9UI72 69 aa1.46□□□□□ -2.18
TM9SF3-202ENST00000443638 HERC1Q15751 4861 aa1.46□□□□□ -2.18
TM9SF3-202ENST00000443638 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
TM9SF3-202ENST00000443638 FCER1GP30273 86 aa1.45□□□□□ -2.18
TM9SF3-202ENST00000443638 KCNQ1DNQ9H478 68 aa1.45□□□□□ -2.18
TM9SF3-202ENST00000443638 ABCA13Q86UQ4 5058 aa1.45□□□□□ -2.18
TM9SF3-202ENST00000443638 SNRPGP15A8MWD9 76 aa1.44□□□□□ -2.18
TM9SF3-202ENST00000443638 DEFB114Q30KQ6 69 aa1.44□□□□□ -2.18
TM9SF3-202ENST00000443638 Q8IZM0 81 aa1.44□□□□□ -2.18
TM9SF3-202ENST00000443638 FRAS1Q86XX4 4008 aa1.44□□□□□ -2.18
TM9SF3-202ENST00000443638 PLCE1Q9P212 2302 aa1.44□□□□□ -2.18
TM9SF3-202ENST00000443638 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
TM9SF3-202ENST00000443638 DEFB108AA8MXU0 73 aa1.43□□□□□ -2.18
TM9SF3-202ENST00000443638 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
TM9SF3-202ENST00000443638 TNCP24821 2201 aa1.43□□□□□ -2.18
TM9SF3-202ENST00000443638 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
TM9SF3-202ENST00000443638 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
TM9SF3-202ENST00000443638 ETDCA0A1B0GVM5 59 aa1.41□□□□□ -2.18
TM9SF3-202ENST00000443638 CCL22O00626 93 aa1.41□□□□□ -2.18
TM9SF3-202ENST00000443638 NMES1Q9C002 83 aa1.41□□□□□ -2.18
TM9SF3-202ENST00000443638 HECTD4Q9Y4D8 3996 aa1.4□□□□□ -2.19
TM9SF3-202ENST00000443638 DEFB131BA0A096LNP1 70 aa1.4□□□□□ -2.19
TM9SF3-202ENST00000443638 SERF2P84101 59 aa1.4□□□□□ -2.19
TM9SF3-202ENST00000443638 DEFB110Q30KQ9 67 aa1.4□□□□□ -2.19
TM9SF3-202ENST00000443638 LYSTQ99698 3801 aa1.4□□□□□ -2.19
TM9SF3-202ENST00000443638 DNAH3Q8TD57 4116 aa1.39□□□□□ -2.19
TM9SF3-202ENST00000443638 DNAH10Q8IVF4 4471 aa1.39□□□□□ -2.19
TM9SF3-202ENST00000443638 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
TM9SF3-202ENST00000443638 WNK2Q9Y3S1 2297 aa1.39□□□□□ -2.19
TM9SF3-202ENST00000443638 K7EMI3 77 aa1.38□□□□□ -2.19
TM9SF3-202ENST00000443638 HSPG2P98160 4391 aa1.38□□□□□ -2.19
TM9SF3-202ENST00000443638 HUWE1Q7Z6Z7 4374 aaKnown RBP1.38□□□□□ -2.19
TM9SF3-202ENST00000443638 KMT2AQ03164 3969 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 M0R1W7 72 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 NCBP2-AS2Q69YL0 99 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 COX14Q96I36 57 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 DNAH7Q8WXX0 4024 aa1.37□□□□□ -2.19
TM9SF3-202ENST00000443638 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms