RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TENM3Q9P273 2699 aa13.22□□□□□ -0.29
CTDSPL-206ENST00000443503 A0A087X002 238 aa13.21□□□□□ -0.29
CTDSPL-206ENST00000443503 LCE6AA0A183 80 aa13.21□□□□□ -0.29
CTDSPL-206ENST00000443503 SPINT4Q6UDR6 99 aa13.2□□□□□ -0.3
CTDSPL-206ENST00000443503 CELSR1Q9NYQ6 3014 aa13.18□□□□□ -0.3
CTDSPL-206ENST00000443503 SPINK7P58062 85 aa13.17□□□□□ -0.3
CTDSPL-206ENST00000443503 CRIPTQ9P021 101 aa13.17□□□□□ -0.3
CTDSPL-206ENST00000443503 Q5VV11 94 aa13.16□□□□□ -0.3
CTDSPL-206ENST00000443503 A0A1B0GU33 70 aa13.16□□□□□ -0.3
CTDSPL-206ENST00000443503 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
CTDSPL-206ENST00000443503 NOTCH2NLQ7Z3S9 236 aa13.13□□□□□ -0.31
CTDSPL-206ENST00000443503 LCA10Q71F78 164 aa13.12□□□□□ -0.31
CTDSPL-206ENST00000443503 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
CTDSPL-206ENST00000443503 Q5VSD8 79 aa13.06□□□□□ -0.32
CTDSPL-206ENST00000443503 DMDP11532 3685 aa13.05□□□□□ -0.32
CTDSPL-206ENST00000443503 DMAC1Q96GE9 116 aa13□□□□□ -0.33
CTDSPL-206ENST00000443503 KRTAP13-1Q8IUC0 172 aa12.99□□□□□ -0.33
CTDSPL-206ENST00000443503 PKD1L1Q8TDX9 2849 aa12.97□□□□□ -0.33
CTDSPL-206ENST00000443503 CSAG1Q6PB30 78 aa12.9□□□□□ -0.34
CTDSPL-206ENST00000443503 PDZD2O15018 2839 aa12.88□□□□□ -0.35
CTDSPL-206ENST00000443503 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-206ENST00000443503 S4R3F8 94 aa12.88□□□□□ -0.35
CTDSPL-206ENST00000443503 KRTAP13-2Q52LG2 175 aa12.86□□□□□ -0.35
CTDSPL-206ENST00000443503 ASB16-AS1Q495Z4 193 aa12.85□□□□□ -0.35
CTDSPL-206ENST00000443503 PRAC1Q96KF2 57 aa12.84□□□□□ -0.35
CTDSPL-206ENST00000443503 VWFP04275 2813 aa12.82□□□□□ -0.36
CTDSPL-206ENST00000443503 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
CTDSPL-206ENST00000443503 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
CTDSPL-206ENST00000443503 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
CTDSPL-206ENST00000443503 CAMK2N1Q7Z7J9 78 aa12.73□□□□□ -0.37
CTDSPL-206ENST00000443503 TGP01266 2768 aa12.72□□□□□ -0.37
CTDSPL-206ENST00000443503 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
CTDSPL-206ENST00000443503 SEC61BP60468 96 aaKnown RBP12.69□□□□□ -0.38
CTDSPL-206ENST00000443503 M0R2T5 61 aa12.65□□□□□ -0.38
CTDSPL-206ENST00000443503 R4GN34 69 aa12.63□□□□□ -0.39
CTDSPL-206ENST00000443503 RPS29P62273 56 aaKnown RBP12.63□□□□□ -0.39
CTDSPL-206ENST00000443503 H1FX-AS1Q4G0G2 97 aa12.59□□□□□ -0.39
CTDSPL-206ENST00000443503 RPL37P61927 97 aaKnown RBP12.57□□□□□ -0.4
CTDSPL-206ENST00000443503 SPATA8Q6RVD6 105 aa12.54□□□□□ -0.4
CTDSPL-206ENST00000443503 SVEP1Q4LDE5 3571 aa12.51□□□□□ -0.41
CTDSPL-206ENST00000443503 CUBNO60494 3623 aa12.5□□□□□ -0.41
CTDSPL-206ENST00000443503 ZFHX3Q15911 3703 aa12.49□□□□□ -0.41
CTDSPL-206ENST00000443503 NBPF19A0A087WUL8 3843 aa12.48□□□□□ -0.41
CTDSPL-206ENST00000443503 KRTAP21-3Q3LHN1 58 aa12.47□□□□□ -0.41
CTDSPL-206ENST00000443503 M0QZ58 72 aa12.43□□□□□ -0.42
CTDSPL-206ENST00000443503 ADM2Q7Z4H4 148 aa12.4□□□□□ -0.42
CTDSPL-206ENST00000443503 A8MU10 97 aa12.39□□□□□ -0.43
CTDSPL-206ENST00000443503 KRTAP1-4P0C5Y4 121 aa12.37□□□□□ -0.43
CTDSPL-206ENST00000443503 ROMO1P60602 79 aa12.35□□□□□ -0.43
CTDSPL-206ENST00000443503 SRRM2Q9UQ35 2752 aaKnown RBP12.32□□□□□ -0.44
CTDSPL-206ENST00000443503 LUZP6Q538Z0 58 aa12.31□□□□□ -0.44
CTDSPL-206ENST00000443503 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
CTDSPL-206ENST00000443503 A8MUU9 505 aa12.26□□□□□ -0.45
CTDSPL-206ENST00000443503 A6NN06 94 aa12.23□□□□□ -0.45
CTDSPL-206ENST00000443503 C20orf166-AS1Q96NR2 134 aa12.22□□□□□ -0.45
CTDSPL-206ENST00000443503 SPENQ96T58 3664 aaKnown RBP12.22□□□□□ -0.45
CTDSPL-206ENST00000443503 FBN3Q75N90 2809 aa12.06□□□□□ -0.48
CTDSPL-206ENST00000443503 KRTAP16-1A8MUX0 517 aa11.99□□□□□ -0.49
CTDSPL-206ENST00000443503 XP32Q5T750 250 aa11.95□□□□□ -0.5
CTDSPL-206ENST00000443503 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
CTDSPL-206ENST00000443503 KRTAP25-1Q3LHN0 102 aa11.9□□□□□ -0.5
CTDSPL-206ENST00000443503 PLAC4Q8WY50 150 aa11.87□□□□□ -0.51
CTDSPL-206ENST00000443503 H3BS24 57 aa11.85□□□□□ -0.51
CTDSPL-206ENST00000443503 BSNQ9UPA5 3926 aa11.83□□□□□ -0.52
CTDSPL-206ENST00000443503 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
CTDSPL-206ENST00000443503 COL7A1Q02388 2944 aa11.79□□□□□ -0.52
CTDSPL-206ENST00000443503 MEGF8Q7Z7M0 2845 aa11.76□□□□□ -0.53
CTDSPL-206ENST00000443503 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
CTDSPL-206ENST00000443503 H0YAA0 97 aa11.67□□□□□ -0.54
CTDSPL-206ENST00000443503 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
CTDSPL-206ENST00000443503 TPRXLQ17RH7 258 aa11.64□□□□□ -0.55
CTDSPL-206ENST00000443503 KRTAP10-8P60410 259 aa11.57□□□□□ -0.56
CTDSPL-206ENST00000443503 A0A0A0MQY5 61 aa11.56□□□□□ -0.56
CTDSPL-206ENST00000443503 P0C880 135 aa11.48□□□□□ -0.57
CTDSPL-206ENST00000443503 C10orf95Q9H7T3 257 aa11.44□□□□□ -0.58
CTDSPL-206ENST00000443503 TNP1P09430 55 aa11.42□□□□□ -0.58
CTDSPL-206ENST00000443503 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
CTDSPL-206ENST00000443503 NDUFAF8A1L188 74 aa11.34□□□□□ -0.59
CTDSPL-206ENST00000443503 KRTAP3-1Q9BYR8 98 aa11.17□□□□□ -0.62
CTDSPL-206ENST00000443503 ZNF469Q96JG9 3925 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL-206ENST00000443503 PP632Q6XCG6 107 aa11.09□□□□□ -0.63
CTDSPL-206ENST00000443503 KRTAP10-10P60014 251 aa11.07□□□□□ -0.64
CTDSPL-206ENST00000443503 HUWE1Q7Z6Z7 4374 aaKnown RBP10.97□□□□□ -0.65
CTDSPL-206ENST00000443503 KRTAP12-2P59991 146 aa10.94□□□□□ -0.66
CTDSPL-206ENST00000443503 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
CTDSPL-206ENST00000443503 KRTAP12-1P59990 96 aa10.81□□□□□ -0.68
CTDSPL-206ENST00000443503 MT1HL1P0DM35 61 aa10.79□□□□□ -0.68
CTDSPL-206ENST00000443503 KRTAP10-6P60371 365 aaPredicted RBP10.77□□□□□ -0.69
CTDSPL-206ENST00000443503 KRTAP13-4Q3LI77 160 aa10.74□□□□□ -0.69
CTDSPL-206ENST00000443503 KRTAP10-4P60372 401 aaPredicted RBP10.73□□□□□ -0.69
CTDSPL-206ENST00000443503 AKAP9Q99996 3911 aa10.62□□□□□ -0.71
CTDSPL-206ENST00000443503 PRO2289Q9P1D8 64 aa10.62□□□□□ -0.71
CTDSPL-206ENST00000443503 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
CTDSPL-206ENST00000443503 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
CTDSPL-206ENST00000443503 DNHD1Q96M86 4753 aa10.49□□□□□ -0.73
CTDSPL-206ENST00000443503 KRTAP4-5Q9BYR2 181 aa10.49□□□□□ -0.73
CTDSPL-206ENST00000443503 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
CTDSPL-206ENST00000443503 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
CTDSPL-206ENST00000443503 PLECQ15149 4684 aaKnown RBP10.41□□□□□ -0.74
CTDSPL-206ENST00000443503 DNAH11Q96DT5 4516 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms