RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 Q96NJ1 140 aa8.54□□□□□ -1.04
MCF2L-218ENST00000442625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.04
MCF2L-218ENST00000442625 IGLV7-46A0A075B6I9 117 aa8.52□□□□□ -1.05
MCF2L-218ENST00000442625 A0A087X002 238 aa8.52□□□□□ -1.05
MCF2L-218ENST00000442625 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
MCF2L-218ENST00000442625 PLECQ15149 4684 aaKnown RBP8.52□□□□□ -1.05
MCF2L-218ENST00000442625 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
MCF2L-218ENST00000442625 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
MCF2L-218ENST00000442625 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
MCF2L-218ENST00000442625 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
MCF2L-218ENST00000442625 J3QL48 77 aa8.47□□□□□ -1.05
MCF2L-218ENST00000442625 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-218ENST00000442625 DNAH8Q96JB1 4490 aa8.44□□□□□ -1.06
MCF2L-218ENST00000442625 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
MCF2L-218ENST00000442625 HRES1P13985 223 aa8.44□□□□□ -1.06
MCF2L-218ENST00000442625 SPINK7P58062 85 aa8.43□□□□□ -1.06
MCF2L-218ENST00000442625 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
MCF2L-218ENST00000442625 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
MCF2L-218ENST00000442625 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
MCF2L-218ENST00000442625 CSAG1Q6PB30 78 aa8.41□□□□□ -1.06
MCF2L-218ENST00000442625 ROMO1P60602 79 aa8.4□□□□□ -1.06
MCF2L-218ENST00000442625 Q6ZR54 194 aa8.4□□□□□ -1.06
MCF2L-218ENST00000442625 TP53AIP1Q9HCN2 124 aa8.39□□□□□ -1.07
MCF2L-218ENST00000442625 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
MCF2L-218ENST00000442625 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
MCF2L-218ENST00000442625 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
MCF2L-218ENST00000442625 RTL8CO15255 209 aa8.38□□□□□ -1.07
MCF2L-218ENST00000442625 WWC2-AS2Q96NR7 200 aa8.38□□□□□ -1.07
MCF2L-218ENST00000442625 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
MCF2L-218ENST00000442625 Q5W150 140 aa8.38□□□□□ -1.07
MCF2L-218ENST00000442625 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
MCF2L-218ENST00000442625 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
MCF2L-218ENST00000442625 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
MCF2L-218ENST00000442625 A0A087WTM6 91 aa8.36□□□□□ -1.07
MCF2L-218ENST00000442625 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
MCF2L-218ENST00000442625 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
MCF2L-218ENST00000442625 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
MCF2L-218ENST00000442625 NUPR2A6NF83 97 aa8.34□□□□□ -1.07
MCF2L-218ENST00000442625 TGP01266 2768 aa8.34□□□□□ -1.07
MCF2L-218ENST00000442625 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
MCF2L-218ENST00000442625 ZNF861PO60384 105 aa8.3□□□□□ -1.08
MCF2L-218ENST00000442625 FBN3Q75N90 2809 aa8.29□□□□□ -1.08
MCF2L-218ENST00000442625 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
MCF2L-218ENST00000442625 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
MCF2L-218ENST00000442625 MEGF8Q7Z7M0 2845 aa8.27□□□□□ -1.09
MCF2L-218ENST00000442625 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
MCF2L-218ENST00000442625 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
MCF2L-218ENST00000442625 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
MCF2L-218ENST00000442625 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
MCF2L-218ENST00000442625 KRTAP13-3Q3SY46 172 aa8.23□□□□□ -1.09
MCF2L-218ENST00000442625 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
MCF2L-218ENST00000442625 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.1
MCF2L-218ENST00000442625 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
MCF2L-218ENST00000442625 P0C880 135 aa8.16□□□□□ -1.1
MCF2L-218ENST00000442625 ACYP2P14621 99 aa8.16□□□□□ -1.1
MCF2L-218ENST00000442625 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
MCF2L-218ENST00000442625 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
MCF2L-218ENST00000442625 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
MCF2L-218ENST00000442625 LY6G6CO95867 125 aa8.09□□□□□ -1.11
MCF2L-218ENST00000442625 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
MCF2L-218ENST00000442625 A0A1B0GU69 56 aa8.09□□□□□ -1.12
MCF2L-218ENST00000442625 KRTAP10-2P60368 255 aa8.09□□□□□ -1.12
MCF2L-218ENST00000442625 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
MCF2L-218ENST00000442625 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
MCF2L-218ENST00000442625 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
MCF2L-218ENST00000442625 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
MCF2L-218ENST00000442625 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
MCF2L-218ENST00000442625 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
MCF2L-218ENST00000442625 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
MCF2L-218ENST00000442625 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
MCF2L-218ENST00000442625 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
MCF2L-218ENST00000442625 SPINK1P00995 79 aa7.98□□□□□ -1.13
MCF2L-218ENST00000442625 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
MCF2L-218ENST00000442625 LUZP6Q538Z0 58 aa7.96□□□□□ -1.14
MCF2L-218ENST00000442625 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
MCF2L-218ENST00000442625 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
MCF2L-218ENST00000442625 NDUFAF8A1L188 74 aa7.93□□□□□ -1.14
MCF2L-218ENST00000442625 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
MCF2L-218ENST00000442625 UQCR11O14957 56 aa7.92□□□□□ -1.14
MCF2L-218ENST00000442625 Q8N1X5 172 aa7.92□□□□□ -1.14
MCF2L-218ENST00000442625 HYDINQ4G0P3 5121 aa7.92□□□□□ -1.14
MCF2L-218ENST00000442625 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
MCF2L-218ENST00000442625 FAT2Q9NYQ8 4349 aa7.89□□□□□ -1.15
MCF2L-218ENST00000442625 PKD1P98161 4303 aa7.88□□□□□ -1.15
MCF2L-218ENST00000442625 A8MUU9 505 aa7.87□□□□□ -1.15
MCF2L-218ENST00000442625 Q6ZSA8 131 aa7.87□□□□□ -1.15
MCF2L-218ENST00000442625 K7ERS5 55 aa7.83□□□□□ -1.16
MCF2L-218ENST00000442625 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
MCF2L-218ENST00000442625 LCE2BO14633 110 aa7.76□□□□□ -1.17
MCF2L-218ENST00000442625 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
MCF2L-218ENST00000442625 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
MCF2L-218ENST00000442625 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
MCF2L-218ENST00000442625 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
MCF2L-218ENST00000442625 H0YAA0 97 aa7.71□□□□□ -1.18
MCF2L-218ENST00000442625 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
MCF2L-218ENST00000442625 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
MCF2L-218ENST00000442625 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
MCF2L-218ENST00000442625 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
MCF2L-218ENST00000442625 FAT1Q14517 4588 aa7.6□□□□□ -1.19
MCF2L-218ENST00000442625 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms