RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NUPR2A6NF83 97 aa10.13□□□□□ -0.79
PMS1-213ENST00000441310 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
PMS1-213ENST00000441310 STARD9Q9P2P6 4700 aa10.12□□□□□ -0.79
PMS1-213ENST00000441310 SPRR1BP22528 89 aa10.12□□□□□ -0.79
PMS1-213ENST00000441310 Q96NJ1 140 aa10.12□□□□□ -0.79
PMS1-213ENST00000441310 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
PMS1-213ENST00000441310 PANO1I0J062 215 aa10.09□□□□□ -0.79
PMS1-213ENST00000441310 MRPL34Q9BQ48 92 aaKnown RBP10.07□□□□□ -0.8
PMS1-213ENST00000441310 FBN3Q75N90 2809 aa10.07□□□□□ -0.8
PMS1-213ENST00000441310 A0A087X002 238 aa10.07□□□□□ -0.8
PMS1-213ENST00000441310 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
PMS1-213ENST00000441310 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
PMS1-213ENST00000441310 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
PMS1-213ENST00000441310 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
PMS1-213ENST00000441310 Q6ZRN7 208 aaPredicted RBP10.05□□□□□ -0.8
PMS1-213ENST00000441310 A0A1B0GU69 56 aa10.03□□□□□ -0.8
PMS1-213ENST00000441310 RTL8CO15255 209 aa10.03□□□□□ -0.8
PMS1-213ENST00000441310 ACYP2P14621 99 aa10.02□□□□□ -0.81
PMS1-213ENST00000441310 KMT2AQ03164 3969 aa10.02□□□□□ -0.81
PMS1-213ENST00000441310 Q5W150 140 aa10.01□□□□□ -0.81
PMS1-213ENST00000441310 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
PMS1-213ENST00000441310 CSAG1Q6PB30 78 aa10□□□□□ -0.81
PMS1-213ENST00000441310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.99□□□□□ -0.81
PMS1-213ENST00000441310 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
PMS1-213ENST00000441310 MIR22HGQ0VDD5 57 aa9.96□□□□□ -0.81
PMS1-213ENST00000441310 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.81
PMS1-213ENST00000441310 A0A087WTM6 91 aa9.96□□□□□ -0.82
PMS1-213ENST00000441310 LY6G6CO95867 125 aa9.95□□□□□ -0.82
PMS1-213ENST00000441310 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
PMS1-213ENST00000441310 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
PMS1-213ENST00000441310 UQCR11O14957 56 aa9.9□□□□□ -0.83
PMS1-213ENST00000441310 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.83
PMS1-213ENST00000441310 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
PMS1-213ENST00000441310 DMAC1Q96GE9 116 aa9.87□□□□□ -0.83
PMS1-213ENST00000441310 SPACA4Q8TDM5 124 aa9.86□□□□□ -0.83
PMS1-213ENST00000441310 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
PMS1-213ENST00000441310 C1orf134Q5TEV5 83 aa9.85□□□□□ -0.83
PMS1-213ENST00000441310 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
PMS1-213ENST00000441310 KRTAP13-1Q8IUC0 172 aa9.84□□□□□ -0.83
PMS1-213ENST00000441310 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
PMS1-213ENST00000441310 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
PMS1-213ENST00000441310 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
PMS1-213ENST00000441310 WWC2-AS2Q96NR7 200 aa9.77□□□□□ -0.85
PMS1-213ENST00000441310 ZNF861PO60384 105 aa9.74□□□□□ -0.85
PMS1-213ENST00000441310 FRAS1Q86XX4 4008 aa9.74□□□□□ -0.85
PMS1-213ENST00000441310 KRTAP10-2P60368 255 aa9.73□□□□□ -0.85
PMS1-213ENST00000441310 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
PMS1-213ENST00000441310 DNAH6Q9C0G6 4158 aa9.71□□□□□ -0.86
PMS1-213ENST00000441310 DNAH17Q9UFH2 4485 aa9.69□□□□□ -0.86
PMS1-213ENST00000441310 ZNF706Q9Y5V0 76 aaPredicted RBP9.67□□□□□ -0.86
PMS1-213ENST00000441310 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
PMS1-213ENST00000441310 DNAH11Q96DT5 4516 aa9.65□□□□□ -0.86
PMS1-213ENST00000441310 DNAH8Q96JB1 4490 aa9.65□□□□□ -0.87
PMS1-213ENST00000441310 IGKV2-30P06310 120 aa9.65□□□□□ -0.87
PMS1-213ENST00000441310 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
PMS1-213ENST00000441310 SPINK1P00995 79 aa9.64□□□□□ -0.87
PMS1-213ENST00000441310 HYDINQ4G0P3 5121 aa9.63□□□□□ -0.87
PMS1-213ENST00000441310 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
PMS1-213ENST00000441310 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
PMS1-213ENST00000441310 KRTAP10-1P60331 282 aa9.58□□□□□ -0.88
PMS1-213ENST00000441310 ROMO1P60602 79 aa9.56□□□□□ -0.88
PMS1-213ENST00000441310 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
PMS1-213ENST00000441310 DNAH5Q8TE73 4624 aa9.55□□□□□ -0.88
PMS1-213ENST00000441310 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
PMS1-213ENST00000441310 LRP1BQ9NZR2 4599 aa9.5□□□□□ -0.89
PMS1-213ENST00000441310 A8MUU9 505 aa9.48□□□□□ -0.89
PMS1-213ENST00000441310 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
PMS1-213ENST00000441310 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
PMS1-213ENST00000441310 Q8N1X5 172 aa9.46□□□□□ -0.89
PMS1-213ENST00000441310 H0YAA0 97 aa9.46□□□□□ -0.9
PMS1-213ENST00000441310 FAT2Q9NYQ8 4349 aa9.44□□□□□ -0.9
PMS1-213ENST00000441310 Q6ZSA8 131 aa9.44□□□□□ -0.9
PMS1-213ENST00000441310 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
PMS1-213ENST00000441310 PKD1P98161 4303 aa9.43□□□□□ -0.9
PMS1-213ENST00000441310 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
PMS1-213ENST00000441310 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
PMS1-213ENST00000441310 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
PMS1-213ENST00000441310 SMR3BP02814 79 aaPredicted RBP9.35□□□□□ -0.91
PMS1-213ENST00000441310 VPS13BQ7Z7G8 4022 aa9.35□□□□□ -0.91
PMS1-213ENST00000441310 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
PMS1-213ENST00000441310 TYMSOSQ8TAI1 123 aa9.35□□□□□ -0.91
PMS1-213ENST00000441310 P0C880 135 aa9.34□□□□□ -0.91
PMS1-213ENST00000441310 SACSQ9NZJ4 4579 aa9.32□□□□□ -0.92
PMS1-213ENST00000441310 A0A1B0GU33 70 aa9.3□□□□□ -0.92
PMS1-213ENST00000441310 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
PMS1-213ENST00000441310 H1FX-AS1Q4G0G2 97 aa9.21□□□□□ -0.93
PMS1-213ENST00000441310 FAT1Q14517 4588 aa9.2□□□□□ -0.94
PMS1-213ENST00000441310 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
PMS1-213ENST00000441310 KMT2CQ8NEZ4 4911 aaKnown RBP9.17□□□□□ -0.94
PMS1-213ENST00000441310 K7ERS5 55 aa9.16□□□□□ -0.94
PMS1-213ENST00000441310 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
PMS1-213ENST00000441310 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
PMS1-213ENST00000441310 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
PMS1-213ENST00000441310 RYR2Q92736 4967 aa9.04□□□□□ -0.96
PMS1-213ENST00000441310 COX6B2Q6YFQ2 88 aa9.03□□□□□ -0.96
PMS1-213ENST00000441310 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
PMS1-213ENST00000441310 NDUFAF8A1L188 74 aa9.02□□□□□ -0.97
PMS1-213ENST00000441310 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
PMS1-213ENST00000441310 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
PMS1-213ENST00000441310 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms